Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031180.1-P | Field mustard | cytosol | 98.93 | 98.4 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 83.96 | 91.28 |
| Solyc02g084420.2.1 | Tomato | cytosol | 39.57 | 84.09 |
| CDY12111 | Canola | cytosol | 75.94 | 78.89 |
| CDX90301 | Canola | cytosol | 75.4 | 78.33 |
| CDX72726 | Canola | cytosol | 72.73 | 75.98 |
| CDY22402 | Canola | plastid | 60.96 | 70.81 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 60.96 | 61.96 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 68.98 | 61.43 |
| PGSC0003DMT400008044 | Potato | cytosol | 68.45 | 60.38 |
| Os09t0527900-01 | Rice | cytosol | 66.31 | 58.77 |
| PGSC0003DMT400009328 | Potato | cytosol | 56.68 | 58.24 |
| EER97079 | Sorghum | cytosol | 64.71 | 57.35 |
| Zm00001d021278_P001 | Maize | cytosol | 63.1 | 57.28 |
| GSMUA_Achr10P... | Banana | cytosol | 63.64 | 57.21 |
| KRH24373 | Soybean | nucleus | 64.71 | 57.08 |
| KRH29344 | Soybean | nucleus | 64.71 | 57.08 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.82 | 56.99 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 60.96 | 54.03 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 60.96 | 54.03 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 60.96 | 54.03 |
| Solyc01g110370.2.1 | Tomato | cytosol | 67.91 | 52.7 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.82 | 52.38 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 66.31 | 51.24 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 60.43 | 41.09 |
| Zm00001d006198_P001 | Maize | cytosol | 53.48 | 39.37 |
| CDX86867 | Canola | nucleus | 26.74 | 31.45 |
| CDX99534 | Canola | nucleus | 26.74 | 31.45 |
| CDY19093 | Canola | nucleus | 32.09 | 25.1 |
| CDY10800 | Canola | nucleus | 32.09 | 24.69 |
| CDY15382 | Canola | nucleus | 31.55 | 24.38 |
| CDY56613 | Canola | nucleus | 31.55 | 24.28 |
| CDY41957 | Canola | nucleus | 27.27 | 24.06 |
| CDY06194 | Canola | nucleus | 29.41 | 23.5 |
| CDX86539 | Canola | nucleus | 29.95 | 23.24 |
| CDY09992 | Canola | nucleus | 28.88 | 22.98 |
| CDY15558 | Canola | nucleus | 29.41 | 22.92 |
| CDY42602 | Canola | nucleus | 27.27 | 21.79 |
| CDX90306 | Canola | nucleus | 27.81 | 21.58 |
| CDX87448 | Canola | nucleus | 33.69 | 21.58 |
| CDY69214 | Canola | nucleus | 33.16 | 21.53 |
| CDX79268 | Canola | nucleus | 33.16 | 21.53 |
| CDY12117 | Canola | nucleus | 27.81 | 21.49 |
| CDY11657 | Canola | nucleus | 33.69 | 21.36 |
| CDX88458 | Canola | nucleus | 33.16 | 21.02 |
| CDY14607 | Canola | nucleus | 32.62 | 20.96 |
| CDY26870 | Canola | nucleus | 32.62 | 20.33 |
| CDY39040 | Canola | nucleus | 29.95 | 19.05 |
| CDY13564 | Canola | nucleus | 29.95 | 18.48 |
| CDX85903 | Canola | nucleus | 30.48 | 17.87 |
| CDX68124 | Canola | nucleus | 30.48 | 17.87 |
| CDY47514 | Canola | nucleus | 30.48 | 17.76 |
| CDX73178 | Canola | nucleus | 30.48 | 17.7 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | GO:A0A078D440 | EnsemblPlants:CDX82018 | ProteinID:CDX82018 | ProteinID:CDX82018.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008270 | GO:GO:0009628 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010100 | GO:GO:0070370 | GO:GO:0071483 | EnsemblPlantsGene:GSBRNA2T00136998001 | InterPro:IPR000315 |
| PFAM:PF00643 | PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF5 | SMART:SM00336 | UniParc:UPI0004EF2264 |
| InterPro:Znf_B-box | : | : | : | : | : |
Description
BnaC08g35830DB-box zinc finger protein 18 [Source:Projected from Arabidopsis thaliana (AT2G21320) UniProtKB/Swiss-Prot;Acc:Q9SJU5]
Coordinates
chrLK031826:+:1908507..1909935
Molecular Weight (calculated)
20474.1 Da
IEP (calculated)
6.217
GRAVY (calculated)
-0.468
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILCDVCES AAAIVFCAAD EAALCCSCDE KVHMCNKLAS RHVRVGLADP SNAPSCDICE NAPAFFYCEI DGTSLCLQCD MVVHVGGKRT HRRFLLLRQR
101: IEFPGDKPNH ADDLGLRCQE ANRQKVSSSG RGQESNGNGD HNMIDLNSNP QRVHEPGSNH QEQGIDVNST NNHEPVGVVP VGTFKRE
101: IEFPGDKPNH ADDLGLRCQE ANRQKVSSSG RGQESNGNGD HNMIDLNSNP QRVHEPGSNH QEQGIDVNST NNHEPVGVVP VGTFKRE
001: MRILCDACES AAAIVFCAAD EAALCCSCDE KVHKCNKLAS RHLRVGLADP SNAPSCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HRRFLLLRQR
101: IEFPGDKPNH ADQLGLRCQK ASSGRGQESN GNGDHDHNMI DLNSNPQRVH EPGSHNQEEG IDVNNANNHE HE
101: IEFPGDKPNH ADQLGLRCQK ASSGRGQESN GNGDHDHNMI DLNSNPQRVH EPGSHNQEEG IDVNNANNHE HE
Arabidopsis Description
BBX18B-box zinc finger protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU5]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.