Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003640.1-P | Field mustard | nucleus | 98.26 | 98.26 |
| CDX79268 | Canola | nucleus | 94.1 | 94.1 |
| CDX87448 | Canola | nucleus | 87.5 | 86.3 |
| CDY14607 | Canola | nucleus | 87.15 | 86.25 |
| CDX88458 | Canola | nucleus | 86.81 | 84.75 |
| CDY11657 | Canola | nucleus | 86.46 | 84.41 |
| CDY26870 | Canola | nucleus | 87.15 | 83.67 |
| AT1G78600.2 | Thale cress | nucleus | 82.64 | 74.61 |
| HORVU7Hr1G023060.1 | Barley | cytosol, mitochondrion, nucleus | 18.06 | 72.22 |
| Solyc07g062160.2.1 | Tomato | nucleus | 55.9 | 54.03 |
| PGSC0003DMT400018196 | Potato | nucleus | 55.56 | 53.69 |
| VIT_19s0014g00350.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 53.82 | 52.9 |
| KRH21881 | Soybean | nucleus | 53.47 | 52.56 |
| CDX99534 | Canola | nucleus | 27.08 | 49.06 |
| CDX86867 | Canola | nucleus | 26.39 | 47.8 |
| PGSC0003DMT400048964 | Potato | nucleus | 49.31 | 47.49 |
| Solyc12g005420.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 46.18 | 47.16 |
| GSMUA_Achr6P21590_001 | Banana | nucleus | 47.57 | 45.67 |
| GSMUA_Achr6P14750_001 | Banana | nucleus | 47.57 | 45.36 |
| KRH27404 | Soybean | extracellular, vacuole | 53.47 | 41.18 |
| TraesCS7B01G006400.1 | Wheat | nucleus | 45.14 | 38.46 |
| TraesCS7A01G108400.1 | Wheat | nucleus | 45.49 | 36.49 |
| Os06t0152200-01 | Rice | nucleus | 45.49 | 36.39 |
| TraesCS7D01G103300.1 | Wheat | nucleus | 45.14 | 35.81 |
| KXG19323 | Sorghum | nucleus | 45.49 | 34.93 |
| CDX86539 | Canola | nucleus | 28.82 | 34.44 |
| CDY19093 | Canola | nucleus | 28.47 | 34.31 |
| CDX72726 | Canola | cytosol | 21.18 | 34.08 |
| CDY15382 | Canola | nucleus | 28.47 | 33.88 |
| CDY15558 | Canola | nucleus | 28.12 | 33.75 |
| CDY56613 | Canola | nucleus | 28.47 | 33.74 |
| CDY10800 | Canola | nucleus | 28.47 | 33.74 |
| Zm00001d036214_P001 | Maize | nucleus | 45.14 | 33.68 |
| CDY09992 | Canola | nucleus | 27.43 | 33.62 |
| CDY06194 | Canola | nucleus | 27.08 | 33.33 |
| CDX82018 | Canola | cytosol | 21.53 | 33.16 |
| CDX90301 | Canola | cytosol | 20.49 | 32.78 |
| CDY12111 | Canola | cytosol | 20.49 | 32.78 |
| CDY41957 | Canola | nucleus | 23.96 | 32.55 |
| Zm00001d045323_P004 | Maize | nucleus | 46.53 | 31.75 |
| HORVU7Hr1G023100.2 | Barley | plastid | 43.75 | 31.34 |
| CDY42602 | Canola | nucleus | 25.0 | 30.77 |
| CDY12117 | Canola | nucleus | 25.0 | 29.75 |
| CDX90306 | Canola | nucleus | 24.65 | 29.46 |
| CDY39040 | Canola | nucleus | 27.78 | 27.21 |
| CDY47514 | Canola | nucleus | 30.21 | 27.1 |
| CDY13564 | Canola | nucleus | 28.47 | 27.06 |
| CDY22402 | Canola | plastid | 14.93 | 26.71 |
| CDX85903 | Canola | nucleus | 29.17 | 26.33 |
| CDX68124 | Canola | nucleus | 29.17 | 26.33 |
| CDX73178 | Canola | nucleus | 29.17 | 26.09 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | GO:A0A078JQX2 | UniProt:A0A078JQX2 | EnsemblPlants:CDY69214 | ProteinID:CDY69214 |
| ProteinID:CDY69214.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00084211001 | InterPro:IPR000315 | PFAM:PF00643 | PFscan:PS50119 | PANTHER:PTHR31832 |
| PANTHER:PTHR31832:SF31 | SMART:SM00336 | UniParc:UPI0004EDFFF0 | InterPro:Znf_B-box | SEG:seg | : |
Description
BnaAnng29690DBnaAnng29690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQX2]
Coordinates
chrLK038879:-:2788..4104
Molecular Weight (calculated)
31321.3 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.607
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIQCNVCET AEAAVLCCAD EAALCLACDE KVHTANKLAG KHQRVPLSVS SSSIPKCDIC QEATGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIRVGLESTT DTGPSTPSND DKTNERKPPT SEPQKLDLDH HNHQVGLPET KVSDHISTKL PIASSGSAAT GSISQWQIDE IFGLTDFDQS YEYVENNGSS
201: KADTSRRGDS DSSSMMRSGE EDGEDNSNCL GGGETSWAVP QIHSPPTASG LNWPRHFKHQ SMFVPHISSS THNTGSSPNQ RVGKRRRF
101: GIRVGLESTT DTGPSTPSND DKTNERKPPT SEPQKLDLDH HNHQVGLPET KVSDHISTKL PIASSGSAAT GSISQWQIDE IFGLTDFDQS YEYVENNGSS
201: KADTSRRGDS DSSSMMRSGE EDGEDNSNCL GGGETSWAVP QIHSPPTASG LNWPRHFKHQ SMFVPHISSS THNTGSSPNQ RVGKRRRF
001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF
Arabidopsis Description
LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.