Factsheet for Os06t0152200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G023060.1	Barley	cytosol, mitochondrion, nucleus	18.06	90.28
TraesCS7B01G006400.1	Wheat	nucleus	71.94	76.63
TraesCS7A01G108400.1	Wheat	nucleus	75.28	75.49
TraesCS7D01G103300.1	Wheat	nucleus	75.83	75.21
KXG19323	Sorghum	nucleus	74.72	71.73
Zm00001d036214_P001	Maize	nucleus	72.5	67.62
HORVU7Hr1G023100.2	Barley	plastid	70.56	63.18
Zm00001d045323_P004	Maize	nucleus	73.61	62.8
GSMUA_Achr6P21590_001	Banana	nucleus	46.94	56.33
GSMUA_Achr6P14750_001	Banana	nucleus	45.83	54.64
VIT_19s0014g00350.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	40.56	49.83
Solyc07g062160.2.1	Tomato	nucleus	40.83	49.33
KRH21881	Soybean	nucleus	40.0	49.15
KRH37922	Soybean	nucleus	39.72	48.97
PGSC0003DMT400018196	Potato	nucleus	40.28	48.66
CDY69214	Canola	nucleus	36.39	45.49
CDX79268	Canola	nucleus	36.39	45.49
Bra003640.1-P	Field mustard	nucleus	36.11	45.14
Bra035051.1-P	Field mustard	nucleus	36.39	44.86
CDX87448	Canola	nucleus	36.39	44.86
CDX88458	Canola	nucleus	36.67	44.75
CDY11657	Canola	nucleus	36.39	44.41
CDY14607	Canola	nucleus	35.56	43.99
Solyc12g005420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.44	43.97
Bra008371.1-P	Field mustard	nucleus	35.28	43.64
PGSC0003DMT400048964	Potato	nucleus	36.11	43.48
Os12t0209200-01	Rice	cytosol	24.72	42.38
CDY26870	Canola	nucleus	35.28	42.33
AT1G78600.2	Thale cress	nucleus	36.94	41.69
Os01t0202500-01	Rice	cytosol, nucleus	39.44	40.11
KRH27404	Soybean	extracellular, vacuole	39.72	38.24
Os05t0204600-01	Rice	cytosol, nucleus, plastid	38.61	36.77
Os02t0606200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	25.28	33.58
Os04t0540200-01	Rice	nucleus	21.94	31.6
Os02t0646200-01	Rice	nucleus	23.61	31.6
Os09t0527900-01	Rice	cytosol	16.11	27.49
Os06t0713000-01	Rice	nucleus	23.06	26.95
Os04t0493000-01	Rice	cytosol	12.78	25.0

Protein Annotations

MapMan:15.5.1.1	Gene3D:3.30.40.200	EntrezGene:4340156	EMBL:AB001886	EMBL:AK072231	EMBL:AK104083
ProteinID:BAD69069.1	ProteinID:BAD69333.1	ProteinID:BAF18748.1	ProteinID:BAS96200.1	ProteinID:EAZ35856.1	GO:GO:0000989
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009628	GO:GO:0009640
GO:GO:0009641	GO:GO:0009658	GO:GO:0009718	GO:GO:0009791	GO:GO:0009987	GO:GO:0015995
GO:GO:0016043	GO:GO:0016607	GO:GO:0043565	InterPro:IPR000315	UniProt:O82116	EnsemblPlantsGene:Os06g0152200
EnsemblPlants:Os06t0152200-01	PFAM:PF00643	PFscan:PS50119	PANTHER:PTHR31832	PANTHER:PTHR31832:SF32	SMART:SM00336
UniParc:UPI00000A2F9D	RefSeq:XP_015644333.1	InterPro:Znf_B-box	SEG:seg	:	:

Description

B-box-containing protein 16, DOUBLE B-BOX zinc finger gene 3a, DOUBLE B-BOX 3aZinc-finger protein R2931. (Os06t0152200-01);Zinc-finger protein R2931. (Os06t0152200-02)

Coordinates

chr6:+:2695460..2699468

Molecular Weight (calculated)

38397.6 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.348

Length

360 amino acids

Sequence
(BLAST)

001: MKIQCNACGA AEARVLCCAD EAALCTACDE EVHAANKLAG KHQRVPLLSD DGGAAPAAAA PAVPKCDICQ EASGYFFCLE DRALLCRDCD VSIHTVNSFV
101: SVHQRFLLTG VQVGLDPADP VPPVADKHVK SAGGSVDSAT KHLQRNPTDL SGENSASLPS QNVINGNYSR QSSVTMAKTG QVNWTMSNNT IRSIDPPPKY
201: SSEESPALLL ASHTSTMAAY SSQISKDSDR IYNLPFTGGN GSDSLHDWHV DEFFSNSEFG FAEHGSSKGD NAKPGSAGGS PQCRLAEGLF VEGLLGQVPD
301: NPWTVPEVPS PPTASGLYWQ NNLLCPSYDS TMFVPEISSL ENSQNNFTVS AGLKRRRRQF

Best Arabidopsis Sequence Match ( AT1G78600.1 )
(BLAST)

001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF

Arabidopsis Description

LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.