Factsheet for HORVU7Hr1G023100.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G023060.1	Barley	cytosol, mitochondrion, nucleus	17.41	97.22
TraesCS7D01G103300.1	Wheat	nucleus	84.33	93.39
TraesCS7A01G108400.1	Wheat	nucleus	82.84	92.76
TraesCS7B01G006400.1	Wheat	nucleus	77.86	92.6
Os06t0152200-01	Rice	nucleus	63.18	70.56
KXG19323	Sorghum	nucleus	62.94	67.47
Zm00001d036214_P001	Maize	nucleus	60.95	63.47
Zm00001d045323_P004	Maize	nucleus	62.69	59.72
GSMUA_Achr6P21590_001	Banana	nucleus	41.29	55.33
GSMUA_Achr6P14750_001	Banana	nucleus	40.3	53.64
Solyc07g062160.2.1	Tomato	nucleus	35.57	47.99
PGSC0003DMT400018196	Potato	nucleus	35.07	47.32
VIT_19s0014g00350.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.33	47.1
KRH21881	Soybean	nucleus	33.58	46.08
KRH37922	Soybean	nucleus	33.08	45.55
CDY69214	Canola	nucleus	31.34	43.75
Bra003640.1-P	Field mustard	nucleus	31.34	43.75
Bra035051.1-P	Field mustard	nucleus	31.59	43.49
CDX87448	Canola	nucleus	31.59	43.49
CDX79268	Canola	nucleus	31.09	43.4
CDX88458	Canola	nucleus	31.84	43.39
CDY11657	Canola	nucleus	31.59	43.05
Bra008371.1-P	Field mustard	nucleus	30.6	42.27
CDY14607	Canola	nucleus	30.6	42.27
PGSC0003DMT400048964	Potato	nucleus	31.09	41.81
Solyc12g005420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	28.86	41.13
CDY26870	Canola	nucleus	30.6	41.0
AT1G78600.2	Thale cress	nucleus	31.84	40.13
HORVU3Hr1G026500.4	Barley	nucleus	34.58	39.83
HORVU6Hr1G028150.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	20.9	39.07
KRH27404	Soybean	extracellular, vacuole	35.57	38.24
HORVU7Hr1G091180.1	Barley	nucleus	20.65	30.18
HORVU2Hr1G092460.9	Barley	cytosol, mitochondrion, nucleus	19.9	28.07
HORVU5Hr1G081190.1	Barley	cytosol, nucleus, plastid	14.18	20.73

Protein Annotations

MapMan:15.5.1.1	Gene3D:3.30.40.200	UniProt:A0A287VPW9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009628	GO:GO:0009641
GO:GO:0009658	GO:GO:0009718	GO:GO:0009987	GO:GO:0015995	GO:GO:0016043	GO:GO:0016607
GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G023100	EnsemblPlants:HORVU7Hr1G023100.2	InterPro:IPR000315	PFAM:PF00643	PFscan:PS50119
PANTHER:PTHR31832	PANTHER:PTHR31832:SF32	SMART:SM00336	UniParc:UPI000B483C65	InterPro:Znf_B-box	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:34797293..34944983

Molecular Weight (calculated)

42257.1 Da

IEP (calculated)

4.987

GRAVY (calculated)

-0.442

Length

402 amino acids

Sequence
(BLAST)

001: SSSHPPPAPP PPPPPSPFPF PEASERAREQ SSAGQAGKTM KIQCNACGAA EARVLCCADE AALCAACDEE VHAANRLAAK HQRVPLLPDA APNAAAPPKC
101: DICQEASGYF FCLEDRALLC RDCDVAIHTV NSFVSAHQRF XXXGVQVGLD PADPVPPVTE KHVNTSSGSV DSQPKHLPKK NPTVLVSGEI GGSIPSQNAI
201: SEDYSRQISA PNTKTGMANW TIDNSALRLA EPPPKYLSDG NSKLMLSGQT TAGLSNQMNR DTGRAYNLPF SGGNGSDSLP DWPVDEFFSN LEYGPNFGFT
301: EHGSSKGDNA KLGSAGGSPQ CRLAEGLFAE DLLGQVPGFD AEDPWVVPEV PSPPTASALC WQGNLHYPVY DGAMFVPEAP SLQSSQDHLT ASAGFKRRRR
401: EV

Best Arabidopsis Sequence Match ( AT1G78600.1 )
(BLAST)

001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF

Arabidopsis Description

LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.