Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010093_P001 | Maize | nucleus | 46.21 | 97.99 |
| KXG19323 | Sorghum | nucleus | 83.89 | 94.4 |
| HORVU7Hr1G023060.1 | Barley | cytosol, mitochondrion, nucleus | 15.4 | 90.28 |
| Zm00001d036214_P001 | Maize | nucleus | 81.75 | 89.38 |
| TraesCS7B01G006400.1 | Wheat | nucleus | 59.72 | 74.56 |
| Os06t0152200-01 | Rice | nucleus | 62.8 | 73.61 |
| TraesCS7D01G103300.1 | Wheat | nucleus | 63.27 | 73.55 |
| TraesCS7A01G108400.1 | Wheat | nucleus | 62.56 | 73.54 |
| HORVU7Hr1G023100.2 | Barley | plastid | 59.72 | 62.69 |
| GSMUA_Achr6P21590_001 | Banana | nucleus | 38.39 | 54.0 |
| GSMUA_Achr6P14750_001 | Banana | nucleus | 38.15 | 53.31 |
| VIT_19s0014g00350.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 34.6 | 49.83 |
| Solyc07g062160.2.1 | Tomato | nucleus | 35.07 | 49.66 |
| KRH21881 | Soybean | nucleus | 34.36 | 49.49 |
| PGSC0003DMT400018196 | Potato | nucleus | 34.83 | 49.33 |
| KRH37922 | Soybean | nucleus | 33.89 | 48.97 |
| Zm00001d017412_P001 | Maize | nucleus | 16.11 | 47.89 |
| CDY69214 | Canola | nucleus | 31.75 | 46.53 |
| CDX79268 | Canola | nucleus | 31.75 | 46.53 |
| CDX87448 | Canola | nucleus | 31.99 | 46.23 |
| Bra035051.1-P | Field mustard | nucleus | 31.99 | 46.23 |
| Bra003640.1-P | Field mustard | nucleus | 31.52 | 46.18 |
| CDX88458 | Canola | nucleus | 31.99 | 45.76 |
| CDY11657 | Canola | nucleus | 31.75 | 45.42 |
| Zm00001d037735_P001 | Maize | cytosol | 34.36 | 45.03 |
| CDY14607 | Canola | nucleus | 30.81 | 44.67 |
| Bra008371.1-P | Field mustard | nucleus | 30.81 | 44.67 |
| AT1G78600.2 | Thale cress | nucleus | 33.41 | 44.2 |
| Solyc12g005420.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 29.38 | 43.97 |
| PGSC0003DMT400048964 | Potato | nucleus | 31.04 | 43.81 |
| CDY26870 | Canola | nucleus | 30.81 | 43.33 |
| Zm00001d039437_P001 | Maize | nucleus | 35.31 | 41.5 |
| KRH27404 | Soybean | extracellular, vacuole | 34.83 | 39.3 |
| Zm00001d051018_P002 | Maize | extracellular | 20.38 | 33.99 |
| Zm00001d025957_P001 | Maize | nucleus | 19.67 | 32.42 |
| Zm00001d051309_P001 | Maize | nucleus | 20.85 | 31.77 |
| Zm00001d002806_P001 | Maize | nucleus | 18.96 | 31.01 |
| Zm00001d021278_P001 | Maize | cytosol | 13.74 | 28.16 |
| Zm00001d036418_P001 | Maize | nucleus | 17.06 | 26.77 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 19.91 | 23.66 |
| Zm00001d006198_P001 | Maize | cytosol | 11.85 | 19.68 |
Protein Annotations
| EnsemblPlants:Zm00001d045323_P004 | EnsemblPlants:Zm00001d045323_T004 | EnsemblPlantsGene:Zm00001d045323 | EntrezGene:100193074 | EntrezGene:542625 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF32 | PFAM:PF00643 | PFscan:PS50119 | ProteinID:AQL02050.1 |
| SEG:seg | SMART:SM00336 | UniParc:UPI0008441E43 | UniProt:A0A1D6NVA1 | MapMan:35.1 | : |
Description
double B-box zinc finger protein11 Profilin homolog5
Coordinates
chr9:-:18935857..18942168
Molecular Weight (calculated)
45437.3 Da
IEP (calculated)
5.117
GRAVY (calculated)
-0.262
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIQCNACGA AEARVLCCAD EAALCVACDE EVHAANKLAG KHQRVPLLTD AAAAAAAAAP AVPKCDICQL YLDVANRLQG LMRLAQGANK QQPYPELLSL
101: FEASGYFFCL EDRALLCRDC DVAIHTVNSF VSVHQRFLLT GVQVGLDPAD PVPPIAEKHV NAVGGSVNQP VRHQPRRSPT VQFSVEGSAS VPTKNVTNGD
201: CSRQNFVPTA RAEVVDWTMN NSTIRSVESP PKYISEESPT LLQSSQTTTV FSNQINGNSD GAYHLSFSGG NVTDSLPDWP VDEFFSNSEY GPNFGFSENG
301: SSKAKLESDI LSGIYMKKGD TAKLGGAGGS PQCRLAEGSV AEELLGQVPG LITDEYMGRV PENSWTVPEV PSPPTASGLN WHGNLCFPAY DSTMFVPEIT
401: SLQNSQSHFT VPSSFKRRRR EY
101: FEASGYFFCL EDRALLCRDC DVAIHTVNSF VSVHQRFLLT GVQVGLDPAD PVPPIAEKHV NAVGGSVNQP VRHQPRRSPT VQFSVEGSAS VPTKNVTNGD
201: CSRQNFVPTA RAEVVDWTMN NSTIRSVESP PKYISEESPT LLQSSQTTTV FSNQINGNSD GAYHLSFSGG NVTDSLPDWP VDEFFSNSEY GPNFGFSENG
301: SSKAKLESDI LSGIYMKKGD TAKLGGAGGS PQCRLAEGSV AEELLGQVPG LITDEYMGRV PENSWTVPEV PSPPTASGLN WHGNLCFPAY DSTMFVPEIT
401: SLQNSQSHFT VPSSFKRRRR EY
001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
Arabidopsis Description
LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.