Factsheet for HORVU5Hr1G081190.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G317700.1	Wheat	cytosol	74.91	97.63
TraesCS5A01G317100.1	Wheat	cytosol	74.55	97.16
TraesCS5D01G323400.1	Wheat	cytosol	73.82	96.21
Solyc02g084420.2.1	Tomato	cytosol	26.55	82.95
Os09t0527900-01	Rice	cytosol	61.82	80.57
Zm00001d021278_P001	Maize	cytosol	60.0	80.1
EER97079	Sorghum	cytosol	60.73	79.15
GSMUA_Achr10P...	Banana	cytosol	50.18	66.35
VIT_04s0023g03030.t01	Wine grape	cytosol	44.36	66.3
PGSC0003DMT400009328	Potato	cytosol	42.55	64.29
VIT_03s0038g00690.t01	Wine grape	cytosol	46.55	60.95
CDX82018	Canola	cytosol	41.09	60.43
AT2G21320.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	37.45	59.88
KRH28766	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	41.82	59.59
Bra031180.1-P	Field mustard	cytosol	40.73	59.57
Bra010718.1-P	Field mustard	cytosol	38.55	58.89
CDY12111	Canola	cytosol	37.82	57.78
CDX90301	Canola	cytosol	37.82	57.78
CDX72726	Canola	cytosol	37.45	57.54
Bra033588.1-P	Field mustard	cytosol	37.09	56.04
KRH24373	Soybean	nucleus	42.91	55.66
KRH29344	Soybean	nucleus	42.91	55.66
PGSC0003DMT400008044	Potato	cytosol	42.91	55.66
KRH76689	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	41.82	54.76
GSMUA_Achr1P07770_001	Banana	cytosol	46.91	53.31
Zm00001d006198_P001	Maize	cytosol	48.36	52.36
CDY22402	Canola	plastid	29.45	50.31
Solyc01g110370.2.1	Tomato	cytosol	42.18	48.13
AT4G38960.3	Thale cress	cytosol	38.55	46.9
HORVU7Hr1G023060.1	Barley	cytosol, mitochondrion, nucleus	9.45	36.11
HORVU6Hr1G028150.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	19.64	25.12
HORVU2Hr1G092460.9	Barley	cytosol, mitochondrion, nucleus	22.18	21.4
HORVU7Hr1G091180.1	Barley	nucleus	18.55	18.55
HORVU3Hr1G026500.4	Barley	nucleus	21.82	17.19
HORVU7Hr1G023100.2	Barley	plastid	20.73	14.18

Protein Annotations

EnsemblPlants:HORVU5Hr1G081190.1	EnsemblPlantsGene:HORVU5Hr1G081190	Gene3D:3.30.40.200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31832
PANTHER:PTHR31832:SF5	PFAM:PF00643	PFscan:PS50119	SEG:seg	SMART:SM00336	UniParc:UPI000B4666B9
UniProt:A0A287RZX2	MapMan:15.5.1.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:563474725..563478591

Molecular Weight (calculated)

29443.2 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.665

Length

275 amino acids

Sequence
(BLAST)

001: PAAAAAASTR PVALAAADLS PLPQHGAARR DQERSEGGER GRSARGARRG AGWRGDDDCA RGGGMRTICD VCESAVAVLF CAADEAALCR PCDEKVHMCN
101: KLASRHVRVG LADPNKLVRC DICESSPAFF YCDIDGTSLC LSCDMAVHVG GKRTHGRYLL LRQRVEFPGD KPGHMDDVAM QQVEPENPRD QNNAHSVAKE
201: QMVNHHHNAY DPASDGNCNG QGAIDSKMFD LNMRPARNNG QGSSSQTHGV DHSQNNHHDS SGVVPTCNYD GAGDK

Best Arabidopsis Sequence Match ( AT4G38960.1 )
(BLAST)

001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLAEP SNAPCCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRFLLLRQR
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK

Arabidopsis Description

B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.