Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031180.1-P | Field mustard | cytosol | 91.86 | 84.04 |
| CDX82018 | Canola | cytosol | 91.28 | 83.96 |
| Solyc02g084420.2.1 | Tomato | cytosol | 41.86 | 81.82 |
| AT4G38960.3 | Thale cress | cytosol | 76.16 | 57.96 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 61.63 | 57.61 |
| PGSC0003DMT400009328 | Potato | cytosol | 59.88 | 56.59 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.37 | 56.48 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 68.02 | 55.71 |
| PGSC0003DMT400008044 | Potato | cytosol | 65.7 | 53.3 |
| KRH24373 | Soybean | nucleus | 64.53 | 52.36 |
| GSMUA_Achr10P... | Banana | cytosol | 62.79 | 51.92 |
| KRH29344 | Soybean | nucleus | 63.95 | 51.89 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 62.79 | 51.43 |
| EER97079 | Sorghum | cytosol | 62.79 | 51.18 |
| Os09t0527900-01 | Rice | cytosol | 62.79 | 51.18 |
| Zm00001d021278_P001 | Maize | cytosol | 61.05 | 50.97 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 60.47 | 49.29 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 60.47 | 49.29 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 60.47 | 49.29 |
| Solyc01g110370.2.1 | Tomato | cytosol | 65.7 | 46.89 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 64.53 | 45.87 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 59.88 | 37.45 |
| Zm00001d006198_P001 | Maize | cytosol | 54.07 | 36.61 |
| AT4G10240.1 | Thale cress | nucleus | 27.91 | 29.63 |
| AT2G31380.1 | Thale cress | nucleus | 31.4 | 22.69 |
| AT1G06040.1 | Thale cress | nucleus | 31.98 | 22.18 |
| AT4G39070.1 | Thale cress | cytosol | 29.65 | 21.07 |
| AT1G78600.2 | Thale cress | nucleus | 32.56 | 17.55 |
| AT1G75540.1 | Thale cress | nucleus | 32.56 | 16.92 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | EntrezGene:816671 | ProteinID:AAD23680.2 | ProteinID:AEC07159.1 | ArrayExpress:AT2G21320 |
| EnsemblPlantsGene:AT2G21320 | RefSeq:AT2G21320 | TAIR:AT2G21320 | RefSeq:AT2G21320-TAIR-G | EnsemblPlants:AT2G21320.1 | TAIR:AT2G21320.1 |
| EMBL:AY060570 | EMBL:AY125573 | GO:GO:0000989 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010100 |
| GO:GO:0046872 | GO:GO:0070370 | GO:GO:0071483 | InterPro:IPR000315 | RefSeq:NP_565507.1 | PFAM:PF00643 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF5 | UniProt:Q9SJU5 | SMART:SM00336 | UniParc:UPI00000A511A |
| InterPro:Znf_B-box | : | : | : | : | : |
Description
BBX18B-box zinc finger protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU5]
Coordinates
chr2:+:9126263..9127987
Molecular Weight (calculated)
18892.0 Da
IEP (calculated)
6.103
GRAVY (calculated)
-0.588
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILCDACES AAAIVFCAAD EAALCCSCDE KVHKCNKLAS RHLRVGLADP SNAPSCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HRRFLLLRQR
101: IEFPGDKPNH ADQLGLRCQK ASSGRGQESN GNGDHDHNMI DLNSNPQRVH EPGSHNQEEG IDVNNANNHE HE
101: IEFPGDKPNH ADQLGLRCQK ASSGRGQESN GNGDHDHNMI DLNSNPQRVH EPGSHNQEEG IDVNNANNHE HE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.