Factsheet for Bra031180.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82018	Canola	cytosol	98.4	98.93
AT2G21320.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	84.04	91.86
Solyc02g084420.2.1	Tomato	cytosol	38.83	82.95
Bra010718.1-P	Field mustard	cytosol	76.6	80.0
Bra033588.1-P	Field mustard	cytosol	74.47	76.92
VIT_03s0038g00690.t01	Wine grape	cytosol	69.15	61.9
VIT_04s0023g03030.t01	Wine grape	cytosol	60.11	61.41
PGSC0003DMT400008044	Potato	cytosol	67.55	59.91
Os09t0527900-01	Rice	cytosol	65.43	58.29
PGSC0003DMT400009328	Potato	cytosol	55.85	57.69
KRH28766	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.04	57.51
KRH29344	Soybean	nucleus	64.36	57.08
KRH24373	Soybean	nucleus	64.36	57.08
EER97079	Sorghum	cytosol	63.83	56.87
Zm00001d021278_P001	Maize	cytosol	62.23	56.8
GSMUA_Achr10P...	Banana	cytosol	62.77	56.73
TraesCS5D01G323400.1	Wheat	cytosol	60.11	53.55
TraesCS5B01G317700.1	Wheat	cytosol	60.11	53.55
TraesCS5A01G317100.1	Wheat	cytosol	60.11	53.55
KRH76689	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.04	52.86
Solyc01g110370.2.1	Tomato	cytosol	67.02	52.28
GSMUA_Achr1P07770_001	Banana	cytosol	65.43	50.83
HORVU5Hr1G081190.1	Barley	cytosol, nucleus, plastid	59.57	40.73
Zm00001d006198_P001	Maize	cytosol	53.72	39.76
Bra021734.1-P	Field mustard	nucleus	31.38	24.58
Bra018249.1-P	Field mustard	nucleus	30.85	23.87
Bra015469.1-P	Field mustard	nucleus	29.79	23.05
Bra032441.1-P	Field mustard	nucleus	28.19	22.65
Bra030635.1-P	Field mustard	nucleus	28.72	22.41
Bra035051.1-P	Field mustard	nucleus	32.98	21.23
Bra003640.1-P	Field mustard	nucleus	32.45	21.18
Bra010713.1-P	Field mustard	nucleus	27.13	21.16
Bra011879.1-P	Field mustard	nucleus	26.6	20.92
Bra008371.1-P	Field mustard	nucleus	31.91	20.62
Bra008204.1-P	Field mustard	nucleus	29.26	18.21
Bra003748.1-P	Field mustard	nucleus	29.79	17.55
Bra015835.1-P	Field mustard	nucleus	29.79	17.45

Protein Annotations

MapMan:15.5.1.1	Gene3D:3.30.40.200	EnsemblPlantsGene:Bra031180	EnsemblPlants:Bra031180.1	EnsemblPlants:Bra031180.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0010100	GO:GO:0070370	GO:GO:0071483	InterPro:IPR000315	UniProt:M4EQV7	PFAM:PF00643
PFscan:PS50119	PANTHER:PTHR31832	PANTHER:PTHR31832:SF5	SMART:SM00336	UniParc:UPI0002542FE5	InterPro:Znf_B-box

Description

AT2G21320 (E=2e-091) | zinc finger (B-box type) family protein

Coordinates

chrA09:-:32134234..32135353

Molecular Weight (calculated)

20503.1 Da

IEP (calculated)

6.217

GRAVY (calculated)

-0.469

Length

188 amino acids

Sequence
(BLAST)

001: MRILCDACES AAAIVFCAAD EAALCCSCDE KVHMCNKLAS RHVRVGLADP SNAPSCDICE NAPAFFYCEI DGTSLCLQCD MVVHVGGKRT HRRFLLLRQR
101: IEFPGDKPNH ADDLGLRCQE ANRQKVSSSG RGQESNGNGD HNMIDLNSNP QRVHEPGSNH QEQGIDVNST NNHEPVGVVP VGAFKRES

Best Arabidopsis Sequence Match ( AT2G21320.1 )
(BLAST)

001: MRILCDACES AAAIVFCAAD EAALCCSCDE KVHKCNKLAS RHLRVGLADP SNAPSCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HRRFLLLRQR
101: IEFPGDKPNH ADQLGLRCQK ASSGRGQESN GNGDHDHNMI DLNSNPQRVH EPGSHNQEEG IDVNNANNHE HE

Arabidopsis Description

BBX18B-box zinc finger protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU5]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.