Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39040 | Canola | nucleus | 91.72 | 94.22 |
| Bra003748.1-P | Field mustard | nucleus | 86.09 | 81.5 |
| Bra015835.1-P | Field mustard | nucleus | 84.44 | 79.44 |
| KRH17384 | Soybean | nucleus | 48.34 | 52.9 |
| GSMUA_Achr4P05180_001 | Banana | cytosol | 34.44 | 51.23 |
| VIT_18s0001g13520.t01 | Wine grape | nucleus | 51.32 | 51.16 |
| Zm00001d017412_P001 | Maize | nucleus | 23.84 | 50.7 |
| GSMUA_Achr9P20930_001 | Banana | cytosol | 30.79 | 50.0 |
| PGSC0003DMT400009514 | Potato | nucleus | 48.68 | 49.33 |
| Solyc04g081020.2.1 | Tomato | nucleus | 48.34 | 48.83 |
| KRH51757 | Soybean | nucleus | 39.07 | 48.16 |
| GSMUA_Achr11P... | Banana | nucleus | 29.47 | 48.11 |
| GSMUA_Achr11P... | Banana | cytosol | 31.46 | 47.98 |
| Bra011879.1-P | Field mustard | nucleus | 36.42 | 46.03 |
| PGSC0003DMT400075652 | Potato | nucleus | 49.34 | 45.15 |
| Solyc12g089240.1.1 | Tomato | nucleus | 49.01 | 44.98 |
| KRH05902 | Soybean | nucleus | 48.68 | 44.95 |
| Bra010713.1-P | Field mustard | nucleus | 35.76 | 44.81 |
| KRH61078 | Soybean | nucleus | 39.4 | 44.74 |
| TraesCS6A01G239300.1 | Wheat | nucleus | 34.77 | 44.49 |
| TraesCS6B01G285200.1 | Wheat | nucleus | 34.77 | 44.12 |
| TraesCS6D01G221700.1 | Wheat | nucleus | 34.44 | 43.7 |
| GSMUA_Achr11P... | Banana | nucleus | 36.09 | 41.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.42 | 40.65 |
| Os04t0540200-01 | Rice | nucleus | 32.78 | 39.6 |
| TraesCS2A01G388500.1 | Wheat | nucleus | 33.77 | 39.53 |
| Zm00001d051309_P001 | Maize | nucleus | 36.09 | 39.35 |
| TraesCS2D01G386300.1 | Wheat | nucleus | 34.11 | 39.31 |
| Zm00001d025957_P001 | Maize | nucleus | 32.78 | 38.67 |
| Os02t0646200-01 | Rice | nucleus | 34.44 | 38.66 |
| Zm00001d002806_P001 | Maize | nucleus | 32.12 | 37.6 |
| TraesCS2B01G406600.2 | Wheat | nucleus | 32.78 | 37.36 |
| EES07539 | Sorghum | nucleus | 36.42 | 37.29 |
| OQU82040 | Sorghum | nucleus | 32.45 | 36.98 |
| HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 33.77 | 35.79 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 31.79 | 34.91 |
| TraesCS7D01G379900.1 | Wheat | nucleus | 32.78 | 34.74 |
| Bra032441.1-P | Field mustard | nucleus | 26.82 | 34.62 |
| Bra030635.1-P | Field mustard | nucleus | 27.48 | 34.44 |
| Bra015469.1-P | Field mustard | nucleus | 27.15 | 33.74 |
| Os06t0713000-01 | Rice | nucleus | 33.44 | 32.79 |
| TraesCS7B01G286300.1 | Wheat | nucleus | 33.44 | 32.48 |
| Zm00001d036418_P001 | Maize | nucleus | 28.81 | 32.34 |
| Bra021734.1-P | Field mustard | nucleus | 25.5 | 32.08 |
| TraesCS7A01G383400.3 | Wheat | nucleus | 33.11 | 31.95 |
| Bra018249.1-P | Field mustard | nucleus | 24.5 | 30.45 |
| Bra010718.1-P | Field mustard | cytosol | 17.88 | 30.0 |
| EER90373 | Sorghum | cytosol | 30.13 | 29.84 |
| Bra008371.1-P | Field mustard | nucleus | 28.48 | 29.55 |
| Bra035051.1-P | Field mustard | nucleus | 28.48 | 29.45 |
| Bra031180.1-P | Field mustard | cytosol | 18.21 | 29.26 |
| GSMUA_Achr1P07740_001 | Banana | nucleus | 37.42 | 28.83 |
| Bra003640.1-P | Field mustard | nucleus | 27.48 | 28.82 |
| Bra033588.1-P | Field mustard | cytosol | 17.22 | 28.57 |
| GSMUA_Achr4P04990_001 | Banana | extracellular, golgi | 35.1 | 27.68 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 31.46 | 26.76 |
Protein Annotations
| EnsemblPlants:Bra008204.1 | EnsemblPlants:Bra008204.1-P | EnsemblPlantsGene:Bra008204 | Gene3D:3.30.40.200 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF6 | PFAM:PF00643 | PFscan:PS50119 | SEG:seg |
| SMART:SM00336 | SUPFAM:SSF57845 | UniParc:UPI0002545B4E | UniProt:M4CVF7 | MapMan:15.5.1.1 | : |
Description
AT1G75540 (E=9e-088) STH2 | STH2 (SALT TOLERANCE HOMOLOG2); transcription factor/ zinc ion binding
Coordinates
chrA02:+:13799613..13800866
Molecular Weight (calculated)
33435.1 Da
IEP (calculated)
7.672
GRAVY (calculated)
-0.604
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRCDVCDK EEALVFCTAD EASLCGGCDH RVHHANKLAS KHLRFSLLNP SPSNNSSPIC DICQEKKALL FCQEDRAILC KDCDSSIHSA NEHVKKHDRF
101: LLTGVKLSAT SSVYKPTSES FSSSQDCYVP GPRSSKKPLS ASQSNSSKIQ LTSKIVGDAA VNQLGSTSTI SEYLMDTLPG WHVEDFLDSS LPPFGFSKSG
201: GDDGVSLQSK NMGIWVPQIP QTLPSSYTNK YFSQDNNNNQ IGMYNNKETS PEVQMYAPIQ NMKQQGQNKR WYDDGGFTVP QITTSSSHPT PLPSNKRSRF
301: FW
101: LLTGVKLSAT SSVYKPTSES FSSSQDCYVP GPRSSKKPLS ASQSNSSKIQ LTSKIVGDAA VNQLGSTSTI SEYLMDTLPG WHVEDFLDSS LPPFGFSKSG
201: GDDGVSLQSK NMGIWVPQIP QTLPSSYTNK YFSQDNNNNQ IGMYNNKETS PEVQMYAPIQ NMKQQGQNKR WYDDGGFTVP QITTSSSHPT PLPSNKRSRF
301: FW
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.