Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008204.1-P | Field mustard | nucleus | 94.22 | 91.72 |
| CDY13564 | Canola | nucleus | 90.82 | 88.12 |
| CDX85903 | Canola | nucleus | 82.31 | 75.86 |
| CDX68124 | Canola | nucleus | 81.63 | 75.24 |
| CDY47514 | Canola | nucleus | 80.95 | 74.14 |
| CDX73178 | Canola | nucleus | 79.93 | 72.98 |
| KRH17384 | Soybean | nucleus | 47.62 | 50.72 |
| GSMUA_Achr9P20930_001 | Banana | cytosol | 31.97 | 50.54 |
| GSMUA_Achr4P05180_001 | Banana | cytosol | 34.69 | 50.25 |
| Zm00001d017412_P001 | Maize | nucleus | 23.81 | 49.3 |
| VIT_18s0001g13520.t01 | Wine grape | nucleus | 50.68 | 49.17 |
| GSMUA_Achr11P... | Banana | nucleus | 30.61 | 48.65 |
| GSMUA_Achr11P... | Banana | cytosol | 32.65 | 48.48 |
| CDY41957 | Canola | nucleus | 34.01 | 47.17 |
| PGSC0003DMT400009514 | Potato | nucleus | 47.62 | 46.98 |
| Solyc04g081020.2.1 | Tomato | nucleus | 47.28 | 46.49 |
| CDY12117 | Canola | nucleus | 37.41 | 45.45 |
| CDY42602 | Canola | nucleus | 36.05 | 45.3 |
| CDX90306 | Canola | nucleus | 36.73 | 44.81 |
| KRH51757 | Soybean | nucleus | 37.07 | 44.49 |
| KRH05902 | Soybean | nucleus | 47.96 | 43.12 |
| PGSC0003DMT400075652 | Potato | nucleus | 47.62 | 42.42 |
| Solyc12g089240.1.1 | Tomato | nucleus | 47.28 | 42.25 |
| TraesCS6A01G239300.1 | Wheat | nucleus | 33.67 | 41.95 |
| TraesCS6B01G285200.1 | Wheat | nucleus | 33.67 | 41.6 |
| KRH61078 | Soybean | nucleus | 37.41 | 41.35 |
| TraesCS6D01G221700.1 | Wheat | nucleus | 33.33 | 41.18 |
| GSMUA_Achr11P... | Banana | nucleus | 35.37 | 39.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.39 | 38.49 |
| CDX86867 | Canola | nucleus | 20.75 | 38.36 |
| CDX99534 | Canola | nucleus | 20.75 | 38.36 |
| Os04t0540200-01 | Rice | nucleus | 31.97 | 37.6 |
| Zm00001d051309_P001 | Maize | nucleus | 35.03 | 37.18 |
| TraesCS2A01G388500.1 | Wheat | nucleus | 32.31 | 36.82 |
| Zm00001d025957_P001 | Maize | nucleus | 31.97 | 36.72 |
| Os02t0646200-01 | Rice | nucleus | 33.33 | 36.43 |
| TraesCS2D01G386300.1 | Wheat | nucleus | 32.31 | 36.26 |
| Zm00001d002806_P001 | Maize | nucleus | 31.29 | 35.66 |
| EES07539 | Sorghum | nucleus | 35.37 | 35.25 |
| CDX86539 | Canola | nucleus | 28.57 | 34.85 |
| OQU82040 | Sorghum | nucleus | 31.29 | 34.72 |
| TraesCS2B01G406600.2 | Wheat | nucleus | 31.29 | 34.72 |
| CDY06194 | Canola | nucleus | 27.55 | 34.62 |
| CDY15558 | Canola | nucleus | 27.89 | 34.17 |
| HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 32.65 | 33.68 |
| CDY09992 | Canola | nucleus | 26.87 | 33.62 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 30.95 | 33.09 |
| TraesCS7D01G379900.1 | Wheat | nucleus | 31.97 | 32.98 |
| CDY19093 | Canola | nucleus | 26.19 | 32.22 |
| Os06t0713000-01 | Rice | nucleus | 32.65 | 31.17 |
| CDY15382 | Canola | nucleus | 25.51 | 30.99 |
| TraesCS7B01G286300.1 | Wheat | nucleus | 32.65 | 30.87 |
| Zm00001d036418_P001 | Maize | nucleus | 28.23 | 30.86 |
| CDY56613 | Canola | nucleus | 25.17 | 30.45 |
| TraesCS7A01G383400.3 | Wheat | nucleus | 32.31 | 30.35 |
| CDY10800 | Canola | nucleus | 24.83 | 30.04 |
| CDX82018 | Canola | cytosol | 19.05 | 29.95 |
| CDX90301 | Canola | cytosol | 18.03 | 29.44 |
| CDY12111 | Canola | cytosol | 18.03 | 29.44 |
| EER90373 | Sorghum | cytosol | 29.59 | 28.52 |
| CDX72726 | Canola | cytosol | 17.35 | 28.49 |
| CDX79268 | Canola | nucleus | 27.89 | 28.47 |
| CDX87448 | Canola | nucleus | 27.89 | 28.08 |
| CDY14607 | Canola | nucleus | 27.55 | 27.84 |
| GSMUA_Achr1P07740_001 | Banana | nucleus | 37.07 | 27.81 |
| CDY69214 | Canola | nucleus | 27.21 | 27.78 |
| GSMUA_Achr4P04990_001 | Banana | extracellular, golgi | 35.71 | 27.42 |
| CDY26870 | Canola | nucleus | 27.89 | 27.33 |
| CDY11657 | Canola | nucleus | 27.21 | 27.12 |
| CDX88458 | Canola | nucleus | 27.21 | 27.12 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 30.95 | 25.63 |
| CDY22402 | Canola | plastid | 12.24 | 22.36 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | GO:A0A078HKR4 | UniProt:A0A078HKR4 | EnsemblPlants:CDY39040 | ProteinID:CDY39040 |
| ProteinID:CDY39040.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00067178001 | InterPro:IPR000315 | PFAM:PF00643 | PFscan:PS50119 |
| PANTHER:PTHR31832 | PANTHER:PTHR31832:SF6 | SMART:SM00336 | SUPFAM:SSF57845 | UniParc:UPI0004EDF858 | InterPro:Znf_B-box |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g17290DBnaA02g17290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKR4]
Coordinates
chrLK032439:+:136271..137657
Molecular Weight (calculated)
32175.8 Da
IEP (calculated)
6.904
GRAVY (calculated)
-0.471
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRCDVCDK EEALVFCTAD EASLCGGCDH RVHHANKLAS KHLRFSLLNP SPSNNSSPIC DICQEKKALL FCQEDRAILC KDCDSSIHSA NEHVKKHDRF
101: LLTGVKLSAT SSVYKPTSES FSSSQDCSVP GPRSSKKPLS ASQSNSSKIQ LTSKIGGDAA VNQLGSTSTI SEYLMDMLPG WHVEDFLDSS LPPFGFSKSG
201: GDDGVSLQSK NMGIWVPQIP QTLPSSYTNK YFSQDNNKET SPEVQMYAPI QNMKQQGQNK RWYDDGGFTV PQITTSSSIL LLFLLTKGPD FSGN
101: LLTGVKLSAT SSVYKPTSES FSSSQDCSVP GPRSSKKPLS ASQSNSSKIQ LTSKIGGDAA VNQLGSTSTI SEYLMDMLPG WHVEDFLDSS LPPFGFSKSG
201: GDDGVSLQSK NMGIWVPQIP QTLPSSYTNK YFSQDNNKET SPEVQMYAPI QNMKQQGQNK RWYDDGGFTV PQITTSSSIL LLFLLTKGPD FSGN
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.