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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr3P20130_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75540.1 GSMUA_Achr3P20130_001 AT2G32950.1 17965270
AT1G75540.1 GSMUA_AchrUn_... AT2G32950.1 17965270
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 64.32 60.1
GSMUA_Achr9P20930_001 Banana cytosol 51.35 51.08
GSMUA_Achr4P05180_001 Banana cytosol 54.59 49.75
GSMUA_Achr8P16260_001 Banana endoplasmic reticulum 31.89 42.14
Solyc01g110180.2.1 Tomato nucleus 45.95 41.87
CDY41957 Canola nucleus 47.57 41.51
Bra011879.1-P Field mustard nucleus 50.81 39.33
CDY42602 Canola nucleus 49.19 38.89
GSMUA_Achr11P... Banana nucleus 52.97 37.4
AT4G39070.1 Thale cress cytosol 48.65 37.19
CDY12117 Canola nucleus 48.65 37.19
CDX90306 Canola nucleus 48.11 36.93
Bra010713.1-P Field mustard nucleus 48.11 36.93
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 35.68 36.46
GSMUA_AchrUn_... Banana nucleus 54.59 36.33
GSMUA_Achr11P... Banana nucleus 38.38 35.86
KRH51476 Soybean nucleus 44.32 35.19
KRH51757 Soybean nucleus 46.49 35.1
GSMUA_Achr3P16700_001 Banana nucleus 36.76 34.87
HORVU7Hr1G091180.1 Barley nucleus 51.35 34.55
PGSC0003DMT400079507 Potato nucleus 45.95 33.73
KRH61078 Soybean nucleus 48.11 33.46
VIT_18s0001g13520.t01 Wine grape nucleus 53.51 32.67
TraesCS7D01G379900.1 Wheat nucleus 50.27 32.63
KRH17384 Soybean nucleus 47.57 31.88
Zm00001d036418_P001 Maize nucleus 45.95 31.6
Os06t0713000-01 Rice nucleus 51.89 31.17
CDY39040 Canola nucleus 48.65 30.61
TraesCS7B01G286300.1 Wheat nucleus 50.81 30.23
PGSC0003DMT400009514 Potato nucleus 48.11 29.87
VIT_03s0038g00340.t01 Wine grape nucleus 48.65 29.8
Solyc04g081020.2.1 Tomato nucleus 48.11 29.77
TraesCS7A01G383400.3 Wheat nucleus 50.27 29.71
Bra008204.1-P Field mustard nucleus 48.11 29.47
PGSC0003DMT400075652 Potato nucleus 51.35 28.79
CDY13564 Canola nucleus 47.03 28.71
EER90373 Sorghum cytosol 47.03 28.52
Solyc12g089240.1.1 Tomato nucleus 50.27 28.27
GSMUA_Achr9P02360_001 Banana cytosol 36.22 28.15
CDX73178 Canola nucleus 48.65 27.95
KRH29378 Soybean nucleus 43.24 27.78
CDY47514 Canola nucleus 48.11 27.73
Bra015835.1-P Field mustard nucleus 48.11 27.73
CDX85903 Canola nucleus 47.03 27.27
CDX68124 Canola nucleus 47.03 27.27
KRH05902 Soybean nucleus 48.11 27.22
GSMUA_Achr6P21320_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 37.3 27.17
Bra003748.1-P Field mustard nucleus 46.49 26.96
AT1G75540.1 Thale cress nucleus 47.57 26.59
Zm00001d014765_P001 Maize cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 50.81 26.48
GSMUA_Achr1P07740_001 Banana nucleus 55.14 26.02
KRH60788 Soybean nucleus 44.32 25.71
GSMUA_Achr4P04990_001 Banana extracellular, golgi 52.43 25.33
KRH24393 Soybean nucleus 27.57 24.88
GSMUA_Achr6P21590_001 Banana nucleus 37.84 23.33
GSMUA_Achr10P... Banana cytosol 25.41 22.6
GSMUA_Achr6P14750_001 Banana nucleus 36.22 22.19
GSMUA_Achr1P07770_001 Banana cytosol 25.95 19.83
GSMUA_Achr6P17960_001 Banana cytosol 16.22 14.02
Protein Annotations
EnsemblPlants:GSMUA_Achr11P21780_001EnsemblPlants:GSMUA_Achr11T21780_001EnsemblPlantsGene:GSMUA_Achr11G21780_001Gene3D:3.30.40.200GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0008270GO:GO:0046872InterPro:IPR000315
InterPro:Znf_B-boxPANTHER:PTHR31832PANTHER:PTHR31832:SF10PFAM:PF00643PFscan:PS50119SEG:seg
SMART:SM00336UniParc:UPI000294D6D3UniProt:M0RUA8MapMan:15.5.1.1::
Description
Putative Probable salt tolerance-like protein At1g75540 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21780_001]
Coordinates
chr11:-:22256319..22256952
Molecular Weight (calculated)
19869.7 Da
IEP (calculated)
6.484
GRAVY (calculated)
-0.072
Length
185 amino acids
Sequence
(BLAST)
001: MKVQCEVCTA EAASVFCCAD EAALCDSCDR RVHGANRLAG KHRRFSLLHP SSSAQPPPLC DVCKEKTGFL FCQEDRAILC RDCDLPIHSA SALTMKHSRF
101: LLTGIRLSAA PKLDAEAVTS MHGHCDIKTD SSGSGGGGGS MVATTNSSSI SEYLMNMLPG WHVDDFLMDD VTAQAFCKVN SQFSC
Best Arabidopsis Sequence Match ( AT1G75540.1 )
(BLAST)
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.