Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH60788 | Soybean | nucleus | 83.69 | 61.13 |
Solyc01g110180.2.1 | Tomato | nucleus | 45.06 | 51.72 |
Zm00001d017412_P001 | Maize | nucleus | 30.47 | 50.0 |
CDY41957 | Canola | nucleus | 45.06 | 49.53 |
CDY42602 | Canola | nucleus | 48.07 | 47.86 |
GSMUA_Achr9P20930_001 | Banana | cytosol | 37.34 | 46.77 |
GSMUA_Achr11P... | Banana | cytosol | 39.48 | 46.46 |
CDY12117 | Canola | nucleus | 48.07 | 46.28 |
CDX90306 | Canola | nucleus | 47.64 | 46.06 |
Bra010713.1-P | Field mustard | nucleus | 47.64 | 46.06 |
Bra011879.1-P | Field mustard | nucleus | 47.21 | 46.03 |
AT4G39070.1 | Thale cress | cytosol | 47.64 | 45.87 |
GSMUA_Achr4P05180_001 | Banana | cytosol | 39.48 | 45.32 |
GSMUA_Achr11P... | Banana | nucleus | 35.19 | 44.32 |
PGSC0003DMT400079507 | Potato | nucleus | 45.49 | 42.06 |
KRH17384 | Soybean | nucleus | 47.64 | 40.22 |
KRH51757 | Soybean | nucleus | 42.06 | 40.0 |
TraesCS6A01G239300.1 | Wheat | nucleus | 39.06 | 38.56 |
TraesCS6D01G221700.1 | Wheat | nucleus | 39.06 | 38.24 |
TraesCS6B01G285200.1 | Wheat | nucleus | 39.06 | 38.24 |
KRH29378 | Soybean | nucleus | 47.21 | 38.19 |
Zm00001d025957_P001 | Maize | nucleus | 40.77 | 37.11 |
KRH61078 | Soybean | nucleus | 41.63 | 36.47 |
Zm00001d002806_P001 | Maize | nucleus | 40.34 | 36.43 |
OQU82040 | Sorghum | nucleus | 40.77 | 35.85 |
TraesCS2A01G388500.1 | Wheat | nucleus | 39.48 | 35.66 |
TraesCS2D01G386300.1 | Wheat | nucleus | 39.91 | 35.5 |
KRH24393 | Soybean | nucleus | 30.9 | 35.12 |
Os04t0540200-01 | Rice | nucleus | 37.34 | 34.8 |
KRH05902 | Soybean | nucleus | 48.5 | 34.56 |
Os02t0646200-01 | Rice | nucleus | 39.48 | 34.2 |
VIT_03s0038g00340.t01 | Wine grape | nucleus | 44.21 | 34.11 |
TraesCS2B01G406600.2 | Wheat | nucleus | 38.63 | 33.96 |
GSMUA_Achr11P... | Banana | nucleus | 36.48 | 32.44 |
GSMUA_AchrUn_... | Banana | nucleus | 38.63 | 32.37 |
Zm00001d051309_P001 | Maize | nucleus | 38.2 | 32.13 |
EES07539 | Sorghum | nucleus | 39.91 | 31.53 |
HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 38.2 | 31.23 |
HORVU7Hr1G091180.1 | Barley | nucleus | 34.76 | 29.45 |
Zm00001d036418_P001 | Maize | nucleus | 33.91 | 29.37 |
TraesCS7D01G379900.1 | Wheat | nucleus | 35.19 | 28.77 |
KRH29616 | Soybean | nucleus | 28.76 | 28.15 |
KRH24617 | Soybean | nucleus | 28.76 | 28.15 |
EER90373 | Sorghum | cytosol | 36.05 | 27.54 |
Os06t0713000-01 | Rice | nucleus | 36.05 | 27.27 |
TraesCS7A01G383400.3 | Wheat | nucleus | 36.05 | 26.84 |
KRH23214 | Soybean | nucleus | 27.47 | 26.78 |
TraesCS7B01G286300.1 | Wheat | nucleus | 35.62 | 26.69 |
KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 21.03 | 25.39 |
GSMUA_Achr4P04990_001 | Banana | extracellular, golgi | 40.77 | 24.8 |
KRH37922 | Soybean | nucleus | 30.9 | 24.66 |
Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 37.34 | 24.51 |
KRH24373 | Soybean | nucleus | 21.89 | 24.06 |
KRH21881 | Soybean | nucleus | 30.04 | 23.89 |
KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 21.03 | 23.33 |
KRH29344 | Soybean | nucleus | 21.03 | 23.11 |
GSMUA_Achr1P07740_001 | Banana | nucleus | 37.34 | 22.19 |
KRH27404 | Soybean | extracellular, vacuole | 30.04 | 18.72 |
KRH10122 | Soybean | nucleus | 27.9 | 16.58 |
Protein Annotations
EntrezGene:100786372 | MapMan:15.5.1.1 | Gene3D:3.30.40.200 | UniProt:A0A0R0JI42 | EMBL:ACUP02003377 | EnsemblPlantsGene:GLYMA_06G009100 |
GO:GO:0000989 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 | GO:GO:0009791 | GO:GO:0009987 |
GO:GO:0046872 | InterPro:IPR000315 | EnsemblPlants:KRH51476 | ProteinID:KRH51476 | ProteinID:KRH51476.1 | PFAM:PF00643 |
PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF18 | SMART:SM00336 | UniParc:UPI000189D242 | InterPro:Znf_B-box |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:715829..717010
Molecular Weight (calculated)
26124.5 Da
IEP (calculated)
6.946
GRAVY (calculated)
-0.574
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIQCDVCDK VEASVFCPAD EAALCHSCDR TIHRANKLAT KHARFSLHYP TSKDFPLCDI CQERRAYLFC QEDRALLCRE CDVPIHRANE HTQKHNRFLL
101: TGVKLSGTCL DPASSSTNYT NNNRVTGSEG RNDARSRMNR PRSSVSNEEN ASNSSCKVED NVASDTGSIS TSSISEYLIE TIPGYCFEDL LDASFAPNGF
201: CKKQNFDHPW AFQDQKRTSG DTMAVPFLKL VIH
101: TGVKLSGTCL DPASSSTNYT NNNRVTGSEG RNDARSRMNR PRSSVSNEEN ASNSSCKVED NVASDTGSIS TSSISEYLIE TIPGYCFEDL LDASFAPNGF
201: CKKQNFDHPW AFQDQKRTSG DTMAVPFLKL VIH
001: MKIWCAVCDK EEASVFCCAD EAALCNGCDR HVHFANKLAG KHLRFSLTSP TFKDAPLCDI CGERRALLFC QEDRAILCRE CDIPIHQANE HTKKHNRFLL
101: TGVKISASPS AYPRASNSNS AAAFGRAKTR PKSVSSEVPS SASNEVFTSS SSTTTSNCYY GIEENYHHVS DSGSGSGCTG SISEYLMETL PGWRVEDLLE
201: HPSCVSYEDN IITNNNNSES YRVYDGSSQF HHQGFWDHKP FS
101: TGVKISASPS AYPRASNSNS AAAFGRAKTR PKSVSSEVPS SASNEVFTSS SSTTTSNCYY GIEENYHHVS DSGSGSGCTG SISEYLMETL PGWRVEDLLE
201: HPSCVSYEDN IITNNNNSES YRVYDGSSQF HHQGFWDHKP FS
Arabidopsis Description
BBX20B-box zinc finger protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q0IGM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.