Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24373 | Soybean | nucleus | 95.28 | 95.28 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 71.23 | 71.9 |
| PGSC0003DMT400008044 | Potato | cytosol | 66.04 | 66.04 |
| Bra010718.1-P | Field mustard | cytosol | 55.66 | 65.56 |
| CDX90301 | Canola | cytosol | 55.19 | 65.0 |
| CDX82018 | Canola | cytosol | 57.08 | 64.71 |
| CDY12111 | Canola | cytosol | 54.72 | 64.44 |
| Bra031180.1-P | Field mustard | cytosol | 57.08 | 64.36 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 58.49 | 64.25 |
| CDX72726 | Canola | cytosol | 54.25 | 64.25 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 51.89 | 63.95 |
| Bra033588.1-P | Field mustard | cytosol | 53.77 | 62.64 |
| Os09t0527900-01 | Rice | cytosol | 60.85 | 61.14 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 59.43 | 60.0 |
| Zm00001d021278_P001 | Maize | cytosol | 57.55 | 59.22 |
| EER97079 | Sorghum | cytosol | 58.02 | 58.29 |
| Solyc01g110370.2.1 | Tomato | cytosol | 65.57 | 57.68 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 57.08 | 57.35 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 56.6 | 56.87 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 56.6 | 56.87 |
| CDY22402 | Canola | plastid | 42.92 | 56.52 |
| AT4G38960.3 | Thale cress | cytosol | 55.66 | 52.21 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 55.66 | 42.91 |
| Zm00001d006198_P001 | Maize | cytosol | 47.64 | 39.76 |
| GSMUA_Achr6P17960_001 | Banana | cytosol | 35.38 | 35.05 |
| KRH23214 | Soybean | nucleus | 26.42 | 23.43 |
| KRH29616 | Soybean | nucleus | 25.47 | 22.69 |
| KRH24617 | Soybean | nucleus | 25.47 | 22.69 |
| KRH37922 | Soybean | nucleus | 30.66 | 22.26 |
| KRH51757 | Soybean | nucleus | 25.0 | 21.63 |
| KRH21881 | Soybean | nucleus | 29.25 | 21.16 |
| KRH51476 | Soybean | nucleus | 23.11 | 21.03 |
| KRH24393 | Soybean | nucleus | 19.81 | 20.49 |
| KRH61078 | Soybean | nucleus | 25.0 | 19.92 |
| KRH29378 | Soybean | nucleus | 26.42 | 19.44 |
| KRH17384 | Soybean | nucleus | 24.53 | 18.84 |
| KRH27404 | Soybean | extracellular, vacuole | 28.77 | 16.31 |
| KRH60788 | Soybean | nucleus | 24.06 | 15.99 |
| KRH05902 | Soybean | nucleus | 24.06 | 15.6 |
| KRH10122 | Soybean | nucleus | 25.94 | 14.03 |
Protein Annotations
| EntrezGene:100527369 | MapMan:15.5.1.1 | Gene3D:3.30.40.200 | EMBL:ACUP02006798 | EMBL:BT092206 | UniProt:C6T445 |
| EnsemblPlantsGene:GLYMA_11G110900 | GO:GO:0000989 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 | GO:GO:0009791 |
| GO:GO:0009987 | InterPro:IPR000315 | ProteinID:KRH29343.1 | EnsemblPlants:KRH29344 | ProteinID:KRH29344 | ProteinID:KRH29344.1 |
| PFAM:PF00643 | PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF17 | SMART:SM00336 | UniParc:UPI0001B157E8 |
| InterPro:Znf_B-box | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:8475007..8478420
Molecular Weight (calculated)
23767.2 Da
IEP (calculated)
6.297
GRAVY (calculated)
-0.657
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTLCDVCES AAAILFCAAD EAALCSACDH KIHMCNKLAS RHVRVGLADP TDVPRCDICE NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR
101: AQFPGDKPAQ MEELELQPMD QNESRRDESQ SLKLKTRDSQ QNHSVSPFPR QENNIDGHGK MDKKLIDLNT RPLRLNGSAP NNQEQCMDIL RGNNHESASV
201: PPVESFKQES EK
101: AQFPGDKPAQ MEELELQPMD QNESRRDESQ SLKLKTRDSQ QNHSVSPFPR QENNIDGHGK MDKKLIDLNT RPLRLNGSAP NNQEQCMDIL RGNNHESASV
201: PPVESFKQES EK
001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLAEP SNAPCCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRFLLLRQR
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
Arabidopsis Description
B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.