Factsheet for Os01t0202500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G139300.1	Wheat	nucleus	67.51	68.48
TraesCS3B01G156900.1	Wheat	nucleus	66.38	67.34
TraesCS3D01G139600.1	Wheat	nucleus	66.38	67.34
EES02283	Sorghum	nucleus	66.38	66.76
HORVU3Hr1G026500.4	Barley	nucleus	65.54	66.48
Zm00001d039437_P001	Maize	nucleus	65.54	64.62
Os05t0204600-01	Rice	cytosol, nucleus, plastid	55.08	51.59
Os06t0152200-01	Rice	nucleus	40.11	39.44
Os12t0209200-01	Rice	cytosol	23.16	39.05
Os04t0540200-01	Rice	nucleus	23.16	32.8
Os02t0606200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	24.86	32.47
Os02t0646200-01	Rice	nucleus	23.45	30.86
Os09t0527900-01	Rice	cytosol	16.1	27.01
Os06t0713000-01	Rice	nucleus	22.88	26.3
Os04t0493000-01	Rice	cytosol	12.71	24.46

Protein Annotations

MapMan:15.5.1.1	Gene3D:3.30.40.200	UniProt:A0A0P0UZC2	ProteinID:BAS70919.1	GO:GO:0000989	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009628	GO:GO:0009640	GO:GO:0009791	GO:GO:0009987	InterPro:IPR000315	EnsemblPlantsGene:Os01g0202500
EnsemblPlants:Os01t0202500-01	PFAM:PF00643	PFscan:PS50119	PANTHER:PTHR31832	PANTHER:PTHR31832:SF13	SMART:SM00336
UniParc:UPI0003938E41	InterPro:Znf_B-box	SEG:seg	:	:	:

Description

B-box-containing protein 1, DOUBLE B-BOX zinc finger gene 3c, DOUBLE B-BOX 3cSimilar to B-box zinc finger family protein. (Os01t0202500-01)

Coordinates

chr1:+:5639835..5641475

Molecular Weight (calculated)

36733.4 Da

IEP (calculated)

6.259

GRAVY (calculated)

-0.298

Length

354 amino acids

Sequence
(BLAST)

001: LCSACEAAEA RVLCCADDAA LCARCDLHVH AANRLAGKHH RLPLLSSSSS SSSPSPPTCD ICQDAHAYFF CVEDRALLCR ACDVAVHTAN ALVSAHRRFL
101: LTGVHVGLDA AADDDDKHPP HPLSSSLPRN TAPPPQPPPK RSPSPIYSDD DVIDWATGGH DIGITGNLPD WSLVDEQFNT PALPPVVTKT PPKRASRGPV
201: TAGTAAAVFG NLAGGSPDWP LNEFFGFADF SSGFGFAENG TSKADSGKIG SMDGSPNGGR SSSSSSSSSA AAAGGGGGGQ DFFGQVPEVH WAVPELPSPP
301: TASGLHWQRD PRYGGGATDA SAVFVPDISS PENPFRCFAA AAAGDHTMKR RRRC

Best Arabidopsis Sequence Match ( AT1G78600.2 )
(BLAST)

001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF

Arabidopsis Description

LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.