Factsheet for PGSC0003DMT400069498

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400036075
PGSC0003DMT400038368
PGSC0003DMT400043197

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06040.1	PGSC0003DMT400038368	AT1G32230.1	11018516
AT1G06040.1	PGSC0003DMT400043197	AT1G32230.1	11018516
AT1G06040.1	PGSC0003DMT400038368	AT1G32230.1	19548978
AT1G06040.1	PGSC0003DMT400043197	AT1G32230.1	19548978
AT1G06040.1	PGSC0003DMT400036075	AT2G32950.1	11226162
AT2G31380.1	PGSC0003DMT400036075	AT2G32950.1	11226162

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g073180.2.1	Tomato	nucleus	97.0	97.0
VIT_05s0102g00750.t01	Wine grape	nucleus	73.82	71.97
KRH23214	Soybean	nucleus	69.1	67.36
KRH29616	Soybean	nucleus	68.24	66.81
KRH24617	Soybean	nucleus	67.38	65.97
Bra032441.1-P	Field mustard	nucleus	62.23	61.97
CDY06194	Canola	nucleus	62.23	61.97
CDY09992	Canola	nucleus	62.23	61.7
CDX86539	Canola	nucleus	62.23	60.17
Bra015469.1-P	Field mustard	nucleus	62.66	60.08
AT1G06040.1	Thale cress	nucleus	63.09	59.27
Bra030635.1-P	Field mustard	nucleus	60.94	58.92
AT2G31380.1	Thale cress	nucleus	60.09	58.82
CDY15558	Canola	nucleus	60.09	58.33
GSMUA_Achr9P02360_001	Banana	cytosol	59.23	57.98
CDY19093	Canola	nucleus	59.23	57.74
Bra021734.1-P	Field mustard	nucleus	59.23	57.5
CDY56613	Canola	nucleus	59.66	57.2
CDY10800	Canola	nucleus	59.66	57.2
CDY15382	Canola	nucleus	58.8	56.61
Bra018249.1-P	Field mustard	nucleus	58.8	56.38
GSMUA_Achr6P21320_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	60.94	55.91
Zm00001d051018_P002	Maize	extracellular	55.79	51.38
TraesCS6A01G216400.1	Wheat	extracellular	56.22	51.17
EES07119	Sorghum	nucleus	57.51	50.95
TraesCS2A01G348900.1	Wheat	nucleus	54.94	50.39
TraesCS6B01G246500.1	Wheat	extracellular	56.22	50.38
TraesCS6D01G199200.1	Wheat	extracellular	55.36	49.62
EES12431	Sorghum	nucleus	56.65	49.25
TraesCS2D01G347300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.51	49.22
TraesCS2B01G367300.2	Wheat	nucleus	54.08	48.84
TraesCS2A01G366100.2	Wheat	nucleus	54.51	48.29
Os02t0606200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	54.94	47.23
Os04t0493000-01	Rice	cytosol	33.05	41.85
KRH10122	Soybean	nucleus	67.38	40.05
PGSC0003DMT400018196	Potato	nucleus	38.2	29.87
PGSC0003DMT400079507	Potato	nucleus	31.76	29.37
PGSC0003DMT400048964	Potato	nucleus	35.62	27.76
PGSC0003DMT400009328	Potato	cytosol	21.03	26.92
PGSC0003DMT400009514	Potato	nucleus	33.48	26.17
PGSC0003DMT400008044	Potato	cytosol	21.89	24.06
PGSC0003DMT400075652	Potato	nucleus	33.91	23.94

Protein Annotations

EntrezGene:102601030	MapMan:15.5.1.1	Gene3D:3.30.40.200	ProteinID:ABA40448	ProteinID:ABA40448.1	EMBL:DQ191647
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR000315	EMBL:KX576530	UniProt:M1CKJ8	PFAM:PF00643	EnsemblPlantsGene:PGSC0003DMG400027017
PGSC:PGSC0003DMG400027017	EnsemblPlants:PGSC0003DMT400069498	PFscan:PS50119	PANTHER:PTHR31832	PANTHER:PTHR31832:SF8	SMART:SM00336
UniParc:UPI000294846F	RefSeq:XP_006347303.1	RefSeq:XP_006347304.1	RefSeq:XP_015164250.1	InterPro:Znf_B-box	SEG:seg

Description

Fructokinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400027017]

Coordinates

chr6:+:53746105..53749420

Molecular Weight (calculated)

25917.7 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.399

Length

233 amino acids

Sequence
(BLAST)

001: MKIQCDVCEK AQATVICCAD EAALCAKCDI EVHAANKLAS KHQRLHLQCL SNKLPPCDIC QDKAAFIFCV EDRALFCKDC DEAIHSASSL AKNHQRFLAT
101: GIRVALSSSC NKEAVKNQLE PQPPQQNSQQ VGLKMPTQQL SGITSPSWPV DDLLGFPDYE SSDKKDLLEL GEFEWLGGID LFGEQTAAEV PELSVPQSSN
201: TNIYRTTKYQ MPYKKPRFEI PDEDEYFTVP DLG

Best Arabidopsis Sequence Match ( AT1G06040.1 )
(BLAST)

001: MKIQCDVCEK APATVICCAD EAALCPQCDI EIHAANKLAS KHQRLHLNSL STKFPRCDIC QEKAAFIFCV EDRALLCRDC DESIHVANSR SANHQRFLAT
101: GIKVALTSTI CSKEIEKNQP EPSNNQQKAN QIPAKSTSQQ QQQPSSATPL PWAVDDFFHF SDIESTDKKG QLDLGAGELD WFSDMGFFGD QINDKALPAA
201: EVPELSVSHL GHVHSYKPMK SNVSHKKPRF ETRYDDDDEE HFIVPDLG

Arabidopsis Description

BBX24B-box zinc finger protein 24 [Source:UniProtKB/Swiss-Prot;Acc:Q96288]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.