Factsheet for Os04t0435700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0771100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63860.1	Os02t0771100-01	AT2G32950.1	19165148

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10837	Sorghum	cytosol	89.62	91.65
HORVU2Hr1G076180.1	Barley	cytosol, endoplasmic reticulum	88.3	90.7
TraesCS2B01G323100.1	Wheat	unclear	88.08	90.27
Zm00001d003632_P003	Maize	extracellular	88.08	90.07
TraesCS2A01G306400.3	Wheat	cytosol	87.86	89.84
TraesCS2D01G304900.2	Wheat	cytosol	87.64	89.62
Os02t0554100-01	Rice	cytosol, plasma membrane	79.69	79.69
GSMUA_Achr6P17690_001	Banana	cytosol	75.94	78.36
GSMUA_Achr3P19000_001	Banana	nucleus	77.26	77.95
VIT_07s0031g02560.t01	Wine grape	cytosol	74.61	75.96
Solyc05g018620.2.1	Tomato	cytosol	50.99	75.24
CDY43762	Canola	cytosol	70.64	74.77
Bra024242.1-P	Field mustard	cytosol	67.77	74.7
Bra037755.1-P	Field mustard	cytosol	68.21	74.28
Bra029198.1-P	Field mustard	cytosol	67.55	74.27
AT5G63860.1	Thale cress	cytosol	71.96	74.09
CDX81201	Canola	cytosol	71.3	73.41
CDY31347	Canola	cytosol	70.42	73.17
CDY60046	Canola	cytosol	72.19	72.99
CDX84451	Canola	cytosol	70.86	71.97
CDY39843	Canola	cytosol	63.58	71.29
KRH59606	Soybean	cytosol	64.02	66.36
KRH53944	Soybean	plastid	68.65	65.61
KRH63996	Soybean	nucleus	68.43	64.32
KRH40960	Soybean	cytosol	44.37	59.47
Os08t0430700-02	Rice	cytosol	23.84	27.34
Os11t0545800-01	Rice	mitochondrion	24.28	25.88
Os04t0226400-01	Rice	plastid	12.14	25.35
Os03t0599600-01	Rice	mitochondrion	10.38	24.74
Os09t0560450-01	Rice	mitochondrion	23.84	24.71
Os01t0777800-01	Rice	cytosol	20.53	23.19
Os01t0964800-01	Rice	mitochondrion	29.36	22.97
Os12t0284000-01	Rice	cytosol	23.84	20.22
Os02t0597000-01	Rice	cytosol	23.4	19.74
Os05t0384800-01	Rice	cytosol	35.76	14.92
Os05t0106700-00	Rice	mitochondrion	30.46	14.68
Os01t0952300-00	Rice	cytosol	35.32	14.0
Os05t0545200-00	Rice	cytosol	30.46	13.61
Os01t0700200-01	Rice	cytosol	31.13	13.51
Os04t0686200-01	Rice	plasma membrane	30.91	13.24
Os04t0583700-00	Rice	cytosol	27.81	12.19
Os08t0430600-01	Rice	plastid	1.1	3.14
Os02t0684900-01	Rice	cytosol	2.43	2.55
Os09t0560500-01	Rice	mitochondrion, plastid	0.44	0.96

Protein Annotations

Gene3D:2.130.10.30	MapMan:26.1.3.1	EntrezGene:4335903	EMBL:AK100857	ProteinID:BAF14763.1	ProteinID:BAS89304.1
ProteinID:CAE02741.1	ProteinID:EAZ30816.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009628	GO:GO:0009881	GO:GO:0009987
GO:GO:0010224	GO:GO:0038023	GO:GO:0042803	InterPro:IPR000408	InterPro:IPR009091	EnsemblPlantsGene:Os04g0435700
EnsemblPlants:Os04t0435700-01	PFAM:PF00415	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870
PANTHER:PTHR22870:SF317	UniProt:Q7XRB6	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SUPFAM:SSF50985	UniParc:UPI00001B1587
InterPro:UVR8	RefSeq:XP_015636973.1	SEG:seg	:	:	:

Description

Similar to UVB-resistance protein UVR8. (Os04t0435700-01)

Coordinates

chr4:+:21682613..21688122

Molecular Weight (calculated)

48175.3 Da

IEP (calculated)

5.397

GRAVY (calculated)

-0.334

Length

453 amino acids

Sequence
(BLAST)

001: MDAVMSAADD AGAASGREDP PPAVVLVSAG ASHSVALLAG NVLCSWGRGE DGQLGHGDAE DRLVPTVLSG FDAAAPGITS VICGADHTTA YSEDEQQVYS
101: WGWGDFGRLG HGNSSDVFTP QPVKALQGIK IKQIACGDSH CLAVTMAGEV QSWGRNQNGQ LGLGTTEDSL LPQKIQSFEG VCVKMIAAGA EHTAAVTEDG
201: DLYGWGWGRY GNLGLGDRND RLVPEKVSSV EGEKMVLIAC GWRHTITVSS SGSLYTYGWS KYGQLGHGDF EDHLVPHKLE ALKDSSISQI SGGWRHTMAL
301: TSDGKLYGWG WNKFGQVGVG DTDDHCFPVQ VKFPEDQKVA QVACGWRHTL AFTEKKNVFS WGRGTSGQLG HGEIVDRNKP VMIDALSPDG PGCKKLEPST
401: AVPFAAKVWV SPSERYAIVP DEKVPNSGEG TARGNGADAN VPENDVKRMR VHS

Best Arabidopsis Sequence Match ( AT5G63860.1 )
(BLAST)

001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI

Arabidopsis Description

UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.