Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G63860.1 | KRH14801 | AT2G32950.1 | 19165148 |
AT5G63860.1 | KRH73341 | AT2G32950.1 | 19165148 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53944 | Soybean | plastid | 88.59 | 90.08 |
KRH59606 | Soybean | cytosol | 68.26 | 75.29 |
VIT_07s0031g02560.t01 | Wine grape | cytosol | 69.5 | 75.28 |
AT5G63860.1 | Thale cress | cytosol | 68.67 | 75.23 |
Bra029198.1-P | Field mustard | cytosol | 64.11 | 75.0 |
Bra037755.1-P | Field mustard | cytosol | 64.73 | 75.0 |
CDY31347 | Canola | cytosol | 67.84 | 75.0 |
CDX81201 | Canola | cytosol | 68.26 | 74.77 |
CDY43762 | Canola | cytosol | 65.98 | 74.3 |
Bra024242.1-P | Field mustard | cytosol | 63.28 | 74.21 |
CDY60046 | Canola | cytosol | 68.88 | 74.11 |
CDY39843 | Canola | cytosol | 60.79 | 72.52 |
CDX84451 | Canola | cytosol | 66.6 | 71.97 |
Solyc05g018620.2.1 | Tomato | cytosol | 45.64 | 71.66 |
KRH40960 | Soybean | cytosol | 49.79 | 71.01 |
GSMUA_Achr6P17690_001 | Banana | cytosol | 64.52 | 70.84 |
GSMUA_Achr3P19000_001 | Banana | nucleus | 64.94 | 69.71 |
EES10837 | Sorghum | cytosol | 63.9 | 69.53 |
Os02t0554100-01 | Rice | cytosol, plasma membrane | 64.94 | 69.09 |
Zm00001d003632_P003 | Maize | extracellular | 63.49 | 69.07 |
HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 62.66 | 68.48 |
Os04t0435700-01 | Rice | plasma membrane | 64.32 | 68.43 |
TraesCS2B01G323100.1 | Wheat | unclear | 62.66 | 68.33 |
TraesCS2D01G304900.2 | Wheat | cytosol | 62.66 | 68.17 |
TraesCS2A01G306400.3 | Wheat | cytosol | 62.45 | 67.95 |
TraesCS6B01G180900.1 | Wheat | cytosol | 56.43 | 67.16 |
TraesCS6D01G142500.1 | Wheat | golgi | 61.0 | 66.82 |
HORVU6Hr1G030600.2 | Barley | plasma membrane | 61.0 | 66.52 |
TraesCS6A01G153100.1 | Wheat | golgi | 61.83 | 63.4 |
KRH63955 | Soybean | mitochondrion | 23.03 | 26.62 |
KRH53977 | Soybean | cytosol, mitochondrion, nucleus | 17.22 | 25.94 |
KRG93861 | Soybean | nucleus | 20.95 | 25.57 |
KRH49501 | Soybean | cytosol | 8.09 | 22.54 |
KRH46563 | Soybean | mitochondrion | 20.54 | 22.3 |
KRH45102 | Soybean | cytosol, nucleus, peroxisome | 21.78 | 22.15 |
KRH01383 | Soybean | cytosol | 21.78 | 22.15 |
KRH22127 | Soybean | cytosol | 21.37 | 21.24 |
KRH08750 | Soybean | cytosol | 28.01 | 21.19 |
KRH27216 | Soybean | cytosol | 21.37 | 20.4 |
KRH30228 | Soybean | cytosol | 17.01 | 20.15 |
KRG97505 | Soybean | cytosol | 21.58 | 19.44 |
KRH31377 | Soybean | cytosol | 21.16 | 19.21 |
KRH69375 | Soybean | nucleus | 23.44 | 19.12 |
KRH74759 | Soybean | nucleus | 22.2 | 19.01 |
KRH59226 | Soybean | cytosol | 19.5 | 17.6 |
KRH45886 | Soybean | nucleus | 29.46 | 14.92 |
KRG99112 | Soybean | cytosol | 29.88 | 14.69 |
KRH73555 | Soybean | nucleus | 32.16 | 13.99 |
KRH40796 | Soybean | cytosol | 21.58 | 13.87 |
KRH14571 | Soybean | nucleus | 31.74 | 13.82 |
KRG99075 | Soybean | nucleus | 31.54 | 13.74 |
KRH45937 | Soybean | nucleus | 31.54 | 13.71 |
KRH00393 | Soybean | cytosol | 29.67 | 13.38 |
KRG91629 | Soybean | cytosol | 30.29 | 13.3 |
KRH70333 | Soybean | cytosol | 30.71 | 13.21 |
KRG98005 | Soybean | cytosol | 28.84 | 12.99 |
KRH35179 | Soybean | cytosol | 30.08 | 12.95 |
KRH69117 | Soybean | cytosol | 28.42 | 12.71 |
KRH30884 | Soybean | cytosol | 28.22 | 12.66 |
KRH31700 | Soybean | cytosol | 28.01 | 12.52 |
KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 26.14 | 12.05 |
KRH08736 | Soybean | endoplasmic reticulum | 15.35 | 10.62 |
KRH30227 | Soybean | cytosol | 6.43 | 6.87 |
Protein Annotations
EntrezGene:100818229 | Gene3D:2.130.10.30 | MapMan:26.1.3.1 | EMBL:ACUP02002734 | EnsemblPlantsGene:GLYMA_04G209600 | GO:GO:0003674 |
GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
GO:GO:0009628 | GO:GO:0009881 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0038023 | GO:GO:0042803 |
UniProt:I1JXY7 | InterPro:IPR000408 | InterPro:IPR009091 | EnsemblPlants:KRH63996 | ProteinID:KRH63996 | ProteinID:KRH63996.1 |
PFAM:PF00415 | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF317 |
InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SUPFAM:SSF50985 | UniParc:UPI000296170D | InterPro:UVR8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:48160270..48168508
Molecular Weight (calculated)
52093.1 Da
IEP (calculated)
5.984
GRAVY (calculated)
-0.325
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCYFDGQYR IRCEKTTEKS NSFIINDINS LLLLTHSFTP NMMELEATAA TSPPSRVLLI SAGASHTVAL LSGNVVCSWG RGEDGQLGHG DTDDRPLPTQ
101: LSALDAQHID SIACGADHTL AYSESRNELY SWGWGDFGRL GHGNSSDLLI PQPIIALQGL RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGNTEDS
201: LVPQKIQAFK GVPIKMVAAG AEHSVAITEN GELYGWGWGR YGNLGLGDRN DRWNPEKVSS VDCDKMVMVA CGWRHTISVS SSGGIYTYGW SKYGQLGHGN
301: FEDSLVPQKL QALSDKLISQ VSGGWRHSMA LTSTGLLFGW GWNKFGQVGV GDNLDHCSPV QVKFPQDQRV VQISCGWRHT IAVTEKENVF SWGRGTNGQL
401: GHGDTIDRNS PKIIEALSVD GSAGPHIESS NTDLLSGKSG VSLSERYAVV PDETVSGQTA SSSSGDRLEI SVPESDVKRL RV
101: LSALDAQHID SIACGADHTL AYSESRNELY SWGWGDFGRL GHGNSSDLLI PQPIIALQGL RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGNTEDS
201: LVPQKIQAFK GVPIKMVAAG AEHSVAITEN GELYGWGWGR YGNLGLGDRN DRWNPEKVSS VDCDKMVMVA CGWRHTISVS SSGGIYTYGW SKYGQLGHGN
301: FEDSLVPQKL QALSDKLISQ VSGGWRHSMA LTSTGLLFGW GWNKFGQVGV GDNLDHCSPV QVKFPQDQRV VQISCGWRHT IAVTEKENVF SWGRGTNGQL
401: GHGDTIDRNS PKIIEALSVD GSAGPHIESS NTDLLSGKSG VSLSERYAVV PDETVSGQTA SSSSGDRLEI SVPESDVKRL RV
001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI
Arabidopsis Description
UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.