Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31700 | Soybean | cytosol | 92.02 | 92.02 |
| CDY66504 | Canola | cytosol | 48.52 | 63.39 |
| KRH00393 | Soybean | cytosol | 61.97 | 62.49 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 61.5 | 62.49 |
| KRH40796 | Soybean | cytosol | 42.86 | 61.6 |
| KRH08750 | Soybean | cytosol | 34.97 | 59.18 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 57.79 | 58.17 |
| PGSC0003DMT400034994 | Potato | cytosol | 55.57 | 57.87 |
| AT3G23270.2 | Thale cress | cytosol | 56.31 | 57.59 |
| CDY12764 | Canola | cytosol | 55.94 | 57.54 |
| CDX85076 | Canola | cytosol | 55.01 | 57.13 |
| Bra023740.1-P | Field mustard | cytosol | 55.19 | 55.82 |
| AT4G14368.1 | Thale cress | cytosol | 55.38 | 53.98 |
| Zm00001d011660_P003 | Maize | cytosol | 52.32 | 53.36 |
| CDX77534 | Canola | cytosol | 54.92 | 53.29 |
| CDY49416 | Canola | cytosol | 55.29 | 53.26 |
| Os05t0545200-00 | Rice | cytosol | 50.09 | 53.25 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 51.39 | 53.07 |
| Os01t0700200-01 | Rice | cytosol | 51.3 | 52.97 |
| EES01332 | Sorghum | cytosol | 51.58 | 52.65 |
| EES19890 | Sorghum | cytosol | 49.81 | 52.65 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 51.11 | 52.53 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 51.02 | 52.33 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 51.11 | 52.33 |
| Zm00001d038882_P002 | Maize | cytosol | 49.91 | 51.0 |
| KRG91629 | Soybean | cytosol | 50.93 | 50.0 |
| KRH30228 | Soybean | cytosol | 18.83 | 49.88 |
| KRH35179 | Soybean | cytosol | 51.02 | 49.11 |
| KRH70333 | Soybean | cytosol | 50.56 | 48.66 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 45.83 | 47.23 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.62 | 45.51 |
| KRH14571 | Soybean | nucleus | 46.2 | 44.99 |
| KRG99075 | Soybean | nucleus | 45.36 | 44.21 |
| KRH73555 | Soybean | nucleus | 45.27 | 44.04 |
| KRH45937 | Soybean | nucleus | 44.9 | 43.64 |
| KRH08736 | Soybean | endoplasmic reticulum | 27.83 | 43.04 |
| KRH45886 | Soybean | nucleus | 37.76 | 42.75 |
| KRG99112 | Soybean | cytosol | 37.57 | 41.33 |
| KRH30227 | Soybean | cytosol | 16.6 | 39.69 |
| KRH30884 | Soybean | cytosol | 34.88 | 35.01 |
| KRG98005 | Soybean | cytosol | 34.6 | 34.86 |
| KRH59606 | Soybean | cytosol | 12.52 | 30.89 |
| KRH40960 | Soybean | cytosol | 9.55 | 30.47 |
| KRH53944 | Soybean | plastid | 12.8 | 29.11 |
| KRH63996 | Soybean | nucleus | 12.71 | 28.42 |
| KRH63955 | Soybean | mitochondrion | 10.58 | 27.34 |
| KRH22127 | Soybean | cytosol | 12.24 | 27.22 |
| KRH46563 | Soybean | mitochondrion | 11.04 | 26.8 |
| KRH53977 | Soybean | cytosol, mitochondrion, nucleus | 7.88 | 26.56 |
| KRH27216 | Soybean | cytosol | 12.43 | 26.53 |
| KRG93861 | Soybean | nucleus | 9.55 | 26.08 |
| KRG97505 | Soybean | cytosol | 12.71 | 25.61 |
| KRH31377 | Soybean | cytosol | 12.43 | 25.24 |
| KRH59226 | Soybean | cytosol | 12.15 | 24.53 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 10.76 | 24.47 |
| KRH01383 | Soybean | cytosol | 10.39 | 23.63 |
| KRH74759 | Soybean | nucleus | 12.15 | 23.27 |
| KRH69375 | Soybean | nucleus | 12.34 | 22.5 |
| KRH49501 | Soybean | cytosol | 3.34 | 20.81 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A0R0KPM3 | EMBL:ACUP02000689 |
| InterPro:BRX_N | InterPro:Brevis_radix_dom | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G005300 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 |
| InterPro:IPR013591 | InterPro:IPR017455 | EnsemblPlants:KRH69117 | ProteinID:KRH69117 | ProteinID:KRH69117.1 | PFAM:PF00415 |
| PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16457 | InterPro:PH-like_dom_sf | InterPro:PH_domain |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF87 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 |
| SUPFAM:SSF57903 | UniParc:UPI0003DE7DD9 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:583829..591684
Molecular Weight (calculated)
117909.0 Da
IEP (calculated)
7.578
GRAVY (calculated)
-0.508
Length
1078 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLASFGSH ERDVEQAFIT LKKGTQLVKY SRKGKPKLCT FRLSSDETKL IWISHGREKN LKLSSVSHII PGQRTAVFRR YLRPEKDYLS FSLIYKKGER
0101: SLDLICKDQA EVEVWFSSLK ALISRGERIR RGKSDLSNES VDLIPNDRPN AGTLEFASSI ARGRFSFESV SHESTSSCSR SDTNMPVRTS CGDGSRVSVS
0201: SVSHSSSVGS GLDDIESLGD VYIWGEVWVD GNSSDGLGSL ASCKTDVLTP KPLESDVVLD VHQIGPGDRH IALVTRQGEV FTWGEDSGGR LGHGFEKDFG
0301: RPHLVESLAI TNVTFVACGE YHSCAVSSSG DLFTWGDGTH GAGLLGHGTD VSYWIPKRVS GPLEGLQVVS VACGTWHSAL ATSNGKLFTI GDGRFGVLGH
0401: GDRDSVAYPK EVQLLSGHKA IKVACGVWHS AAIIEVMGPS GSNTSAKRLF TWGDGDQYRL GHVNKETYLE PTCVAAVAEY NFHQVACGYT MTVALTTSGH
0501: VFTMGGTAYG QLGNPNSDGK VPILVRGKLV GEFVEEISCG ANHVAVLTSR SELYTWGRGA NGRLGHGDTD DQKSPTMVEA LKDRHIKNIS CGSTFTSCIC
0601: LHKWVSGVDQ SVCSDCRQPF GFTRKRRNCY HCGLVYCHPC SSKKASKAAL APTPSKPHRV CDACYAKLKG SDSASNFNRD ISRPSSSIYG RESFHRGEVR
0701: SSRVLLPPTI EPVKYLEIRT NKPGSTHDSI VRAAQVPTSL QLKDVSFPIS LSSVQNVYKP VIQPSQPPTP PTSATPIPMS PYARRPPSPP RSTSPGFSRS
0801: LIDNLRKKND HLNQEVTKWQ NKNQNLEQKS DMQDMKIQEL QKNIEEAMSQ FGEESSKLRE AKEFIKSLAD KLREVTEKLP PEIPDKETLR TMHAQAEEFL
0901: HEEKDFESSS SPQSLESEQQ SAPDVPASDS DSSKLQQQRV EGNDDASGVV PSIDGENILE ESSNSSVSSL VVIPPSSGNG SKLHDSGIPV KEGEKSVIEQ
1001: FEHGVYGTLV VLPSGYKVFK RIRFSKRRFN EQQAEEWWNQ NKDKVLSKYS PPATKNSKTG SSITPPHAEE NSEALPSS
0101: SLDLICKDQA EVEVWFSSLK ALISRGERIR RGKSDLSNES VDLIPNDRPN AGTLEFASSI ARGRFSFESV SHESTSSCSR SDTNMPVRTS CGDGSRVSVS
0201: SVSHSSSVGS GLDDIESLGD VYIWGEVWVD GNSSDGLGSL ASCKTDVLTP KPLESDVVLD VHQIGPGDRH IALVTRQGEV FTWGEDSGGR LGHGFEKDFG
0301: RPHLVESLAI TNVTFVACGE YHSCAVSSSG DLFTWGDGTH GAGLLGHGTD VSYWIPKRVS GPLEGLQVVS VACGTWHSAL ATSNGKLFTI GDGRFGVLGH
0401: GDRDSVAYPK EVQLLSGHKA IKVACGVWHS AAIIEVMGPS GSNTSAKRLF TWGDGDQYRL GHVNKETYLE PTCVAAVAEY NFHQVACGYT MTVALTTSGH
0501: VFTMGGTAYG QLGNPNSDGK VPILVRGKLV GEFVEEISCG ANHVAVLTSR SELYTWGRGA NGRLGHGDTD DQKSPTMVEA LKDRHIKNIS CGSTFTSCIC
0601: LHKWVSGVDQ SVCSDCRQPF GFTRKRRNCY HCGLVYCHPC SSKKASKAAL APTPSKPHRV CDACYAKLKG SDSASNFNRD ISRPSSSIYG RESFHRGEVR
0701: SSRVLLPPTI EPVKYLEIRT NKPGSTHDSI VRAAQVPTSL QLKDVSFPIS LSSVQNVYKP VIQPSQPPTP PTSATPIPMS PYARRPPSPP RSTSPGFSRS
0801: LIDNLRKKND HLNQEVTKWQ NKNQNLEQKS DMQDMKIQEL QKNIEEAMSQ FGEESSKLRE AKEFIKSLAD KLREVTEKLP PEIPDKETLR TMHAQAEEFL
0901: HEEKDFESSS SPQSLESEQQ SAPDVPASDS DSSKLQQQRV EGNDDASGVV PSIDGENILE ESSNSSVSSL VVIPPSSGNG SKLHDSGIPV KEGEKSVIEQ
1001: FEHGVYGTLV VLPSGYKVFK RIRFSKRRFN EQQAEEWWNQ NKDKVLSKYS PPATKNSKTG SSITPPHAEE NSEALPSS
0001: MKTDGMADPS SYVNHDRDID QALVSLKKGT QLLKYSRKGR PKFRSFRLSP DETTLFWLSH GEEKGLKLAT VSRILPGQRT AVFRRYLRPE KDYLSFSLIY
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:F4JVE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.