CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30884	Soybean	cytosol	94.49	94.13
VIT_04s0079g00290.t01	Wine grape	cytosol	55.51	59.1
Solyc02g036390.1.1	Tomato	cytosol	39.81	54.27
PGSC0003DMT400043094	Potato	nucleus	52.52	52.23
CDX87986	Canola	cytosol	10.0	51.94
CDY31624	Canola	cytosol	46.54	50.66
AT1G65920.1	Thale cress	cytosol	47.48	50.5
Bra038181.1-P	Field mustard	cytosol	46.82	50.0
CDX87989	Canola	cytosol	46.73	49.9
GSMUA_Achr1P02140_001	Banana	cytosol	40.75	48.82
GSMUA_Achr5P11650_001	Banana	cytosol	41.78	46.08
Zm00001d017641_P004	Maize	cytosol	36.54	45.41
KRH08750	Soybean	cytosol	26.07	43.8
TraesCS6A01G261000.1	Wheat	cytosol	36.82	43.15
TraesCS2B01G478900.1	Wheat	cytosol, nucleus, peroxisome	40.0	41.51
TraesCS6D01G241800.1	Wheat	cytosol	40.93	41.28
TraesCS2D01G457000.1	Wheat	cytosol, nucleus, peroxisome	39.25	41.06
TraesCS6B01G288400.1	Wheat	cytosol	40.84	40.96
HORVU6Hr1G066460.5	Barley	cytosol	40.47	40.58
TraesCS2A01G456700.1	Wheat	cytosol, nucleus, peroxisome	39.53	40.21
Zm00001d051479_P005	Maize	nucleus	40.28	40.06
KXG26989	Sorghum	cytosol	39.91	40.02
KRH73555	Soybean	nucleus	41.31	39.89
KRG99075	Soybean	nucleus	41.12	39.78
Os04t0583700-00	Rice	cytosol	38.13	39.46
OQU85620	Sorghum	cytosol, mitochondrion, nucleus	39.53	39.42
KRH14571	Soybean	nucleus	40.75	39.39
KRH45937	Soybean	nucleus	40.75	39.31
Zm00001d002544_P004	Maize	cytosol, endoplasmic reticulum, nucleus	40.37	38.92
KRH45886	Soybean	nucleus	34.02	38.24
KRH30228	Soybean	cytosol	14.39	37.84
KRG99112	Soybean	cytosol	33.55	36.63
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	39.53	36.62
KRG91629	Soybean	cytosol	36.73	35.79
KRH35179	Soybean	cytosol	36.92	35.27
KRH70333	Soybean	cytosol	36.26	34.64
KRH69117	Soybean	cytosol	34.86	34.6
KRH31700	Soybean	cytosol	33.93	33.67
KRH00393	Soybean	cytosol	32.9	32.93
KRH08736	Soybean	endoplasmic reticulum	20.84	31.99
KRH40796	Soybean	cytosol	22.34	31.87
KRH59606	Soybean	cytosol	12.71	31.12
KRH53944	Soybean	plastid	12.8	28.9
KRH63996	Soybean	nucleus	12.99	28.84
KRH40960	Soybean	cytosol	9.07	28.7
KRH63955	Soybean	mitochondrion	11.12	28.54
KRH53977	Soybean	cytosol, mitochondrion, nucleus	8.41	28.12
KRH30227	Soybean	cytosol	11.31	26.83
Solyc02g081250.1.1	Tomato	cytosol	52.15	26.74
KRH49501	Soybean	cytosol	4.3	26.59
KRH65503	Soybean	cytosol, mitochondrion, nucleus	25.42	26.0
KRH22127	Soybean	cytosol	11.78	25.98
KRH46563	Soybean	mitochondrion	10.75	25.9
KRG93861	Soybean	nucleus	9.35	25.32
KRH27216	Soybean	cytosol	11.87	25.15
KRH45102	Soybean	cytosol, nucleus, peroxisome	11.12	25.11
KRH01383	Soybean	cytosol	10.93	24.68
KRH31377	Soybean	cytosol	11.87	23.92
KRG97505	Soybean	cytosol	11.87	23.74
KRH59226	Soybean	cytosol	11.5	23.03
KRH74759	Soybean	nucleus	11.31	21.49
KRH69375	Soybean	nucleus	11.12	20.14

Protein Annotations

EntrezGene:100797223	Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02010833
InterPro:Brevis_radix_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G044000	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR000408	InterPro:IPR001849	InterPro:IPR009091	InterPro:IPR011993	InterPro:IPR013083	InterPro:IPR013591
InterPro:IPR017455	UniProt:K7MPW4	ProteinID:KRG98004.1	EnsemblPlants:KRG98005	ProteinID:KRG98005	ProteinID:KRG98005.1
PFAM:PF00415	PFAM:PF01363	PFAM:PF08381	PFAM:PF16457	InterPro:PH-like_dom_sf	InterPro:PH_domain
PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50178	PFscan:PS51514	PANTHER:PTHR22870
PANTHER:PTHR22870:SF177	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SMART:SM00064	SUPFAM:SSF50729	SUPFAM:SSF50985
SUPFAM:SSF57903	UniParc:UPI000295510F	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:3777421..3789101

Molecular Weight (calculated)

118349.0 Da

IEP (calculated)

8.657

GRAVY (calculated)

-0.463

Length

1070 amino acids

Sequence
(BLAST)

0001: MTMEEESLAA VPFDRAIEQA IVSIKKGAYL LKCRRRGKPK LCPFRLSQDE RNLIWYSGQQ EKHLRLSVVT KIVQGQEHIR SQKQNESEKE CHSFSLIYAN
0101: GERSLDLICK DKAQAASWFV GLKAVISRCQ HPRAFSSLRS CKGVQSCASS PAGILRRKKN LGLLDDTSQF TQVHSVCASP TLSLSERCFS DGLSCTSDNF
0201: YSSSSFLSNT HGVTDNSVPS SPYIDPDNHS NIESTRIDKE HKKNLSYRYL MHSTSPHVGK NNVLKDVMIW GGGIGCLVGI VNERFVQPRI YSLVPKLLES
0301: TAMLDVHNIA LGGKHAALAT KQGEVFCWGH GKWGRLGQKI DMDISSPKIV DSLNGLHVKN VACGEYHTCA LTDSGEVYTW GNDVCCADLL IEGRTRSQWI
0401: PQKLGGSLDG ISISSVACGE WHTAIVSSCG RLFTYGDGTF GVLGHGDLRS YSSPKEVESL SGLRVRSAAC GSWHTAAIVE VMFDRFRYNS ASGKLFTWGD
0501: GDEGRLGHVD NGSKLVPTRV TQLVDYDFVQ VSCGRMLTVA LTNMGKVFAM GSAKYGQLGN PHARDKAVMV EGQLKQEFVK VISTGSYHVA VLTSGGSVYT
0601: WGRGENGQLG LGDTEDRYTP CFVEALRDRQ VNTITCGPSF TAAISLHKPI SISDQSTCTG CRLPFGFTRK KHNCYSCGLL FCRACSSKKI TNAPLAPSKS
0701: KAFRVCDQCF DKRQGGTHPV MASKSRNHNS QQLLKHQHKI ADVTEDRGET TVTQGPLLSL GQSCYRKSMP SGRKDWKSNQ ESQQDVEDSS PMLGGMPQWG
0801: QVPCPAIFKI NSTENPVAHV SSSKNKLATV SPFNVESTTY NFSNVETDAT KSDKVLLEEV HRLRAEAKRL EEQCELKNHK IQECQQKIEE SWFVAREEAA
0901: KCKAAKEVIK ALALRLHTIS GKDNVGQEGK AGPNEFVPNV APIHTEMKSP RDVNVDSLSN SPIVFSDTLK SKFGRSLFPK IDNSNRAESQ QDNIDGLKAE
1001: WVEQYEPGVY ITFTTLQCGK KGLKRVRFSR KRFSEKEAEK WWEENQGTVY HKYGIEGYIN NNTSQSQVKG

Best Arabidopsis Sequence Match ( AT1G65920.1 )
(BLAST)

0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI

Arabidopsis Description

F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.