Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017641_P004 | Maize | cytosol | 70.36 | 87.69 |
| Zm00001d051479_P005 | Maize | nucleus | 86.39 | 86.15 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 61.04 | 71.74 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 69.34 | 70.12 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 68.97 | 69.35 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 68.87 | 69.26 |
| KXG26989 | Sorghum | cytosol | 54.52 | 54.83 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 41.57 | 49.94 |
| CDX87986 | Canola | cytosol | 9.41 | 49.03 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 43.15 | 47.73 |
| Solyc02g036390.1.1 | Tomato | cytosol | 31.31 | 42.8 |
| AT1G65920.1 | Thale cress | cytosol | 37.56 | 40.06 |
| CDY31624 | Canola | cytosol | 36.25 | 39.57 |
| KRG98005 | Soybean | cytosol | 39.42 | 39.53 |
| KRH30884 | Soybean | cytosol | 39.42 | 39.39 |
| Bra038181.1-P | Field mustard | cytosol | 36.35 | 38.92 |
| CDX87989 | Canola | cytosol | 36.35 | 38.92 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 36.35 | 38.81 |
| PGSC0003DMT400043094 | Potato | nucleus | 38.3 | 38.2 |
| EES19890 | Sorghum | cytosol | 32.06 | 33.73 |
| EES13137 | Sorghum | cytosol | 33.08 | 33.36 |
| KXG34192 | Sorghum | cytosol | 28.05 | 33.0 |
| EES18851 | Sorghum | cytosol, plastid | 27.96 | 32.75 |
| KXG34127 | Sorghum | cytosol | 28.05 | 32.65 |
| EES01332 | Sorghum | cytosol | 31.59 | 32.1 |
| EES10837 | Sorghum | cytosol | 12.3 | 29.8 |
| EES09892 | Sorghum | mitochondrion | 9.88 | 25.36 |
| KXG25196 | Sorghum | cytosol | 9.04 | 24.81 |
| OQU91404 | Sorghum | cytosol | 11.18 | 24.79 |
| OQU87663 | Sorghum | cytosol | 9.23 | 24.5 |
| EER97183 | Sorghum | mitochondrion | 9.69 | 24.07 |
| KXG35074 | Sorghum | cytosol | 10.72 | 23.81 |
| EES12399 | Sorghum | cytosol, plastid | 10.25 | 20.79 |
| EES07101 | Sorghum | cytosol, plastid | 10.34 | 20.75 |
| KXG26580 | Sorghum | cytosol | 10.34 | 20.67 |
| Solyc02g081250.1.1 | Tomato | cytosol | 38.68 | 19.89 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1Z5RPD2 | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | EnsemblPlants:OQU85620 |
| ProteinID:OQU85620 | ProteinID:OQU85620.1 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF16457 |
| InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 |
| PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 |
| EnsemblPlantsGene:SORBI_3004G279400 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | unigene:Sbi.20718 | UniParc:UPI000B8BAE7F |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:62209048..62215980
Molecular Weight (calculated)
118641.0 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.471
Length
1073 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGGLEWRSS AATTRGVEQA IITLKKGSHL LKCGKRGKPK FCTVRLSYDE RALIWYSKER EKRLSLNSVS SVVLGQKTTK LLRLHWPEKE SHSLSVIYKN
0101: GESSLDLVCK DRDQAECWYL GLTALISVSC TPLLLVNSTN SRRINSCTNS PPSYIQQRNR LFAVHDGRNF TKVHSLYGSP RLIQNKYLHS NLDCSEPFFS
0201: PRQKAWSELD SYLEKISPEL VNRVKNNLRD IRSAETIKDQ RIIQMPKLKQ SEGSNAATDS LKDIFVWGDV LGRMSDHGHV PATNISLPRL LKSSQILNVQ
0301: SIACGEKHAA IVTKQGQVFS WGEENGGRLG HKTSDSVSDP KIIDSLASTP VKTIAFGAKY TCAVSVSGEL YEWGEGIHSL GFGKNQCQRS PWFPHKLIST
0401: SDGISVLKIA CGQWHTAIIS SLGKLYTYGY GTFGVLGHGD THSVVHPKEV ESLRGSRAKS VACGPWHTAA IVETSGTLKS SAPGGKLFTW GDAGGGKLGH
0501: TNKKSKLVPT RVESLIDCDF TQVSCGMSLT AVLTITGVVF TIGSKEHGQL GNSRSDNTSI CMVEGPLKTE FVKDISCGSS HVAVLTMNGK VFTWGKGTEG
0601: QLGLGDYVDR SSPTLVEALE DKQVDSIACS SNFTAVTCVH REISSKDQSV CSSCRLAFRF TRKKHNCYNC GSMFCNSCSS NKVQRAALAP DKSKRCRVCD
0701: ACFNELNKTA QHGKMSCGSK TQKEESSLTE TRTYTPKLSR MLKEANFIME KMGSAQSPNQ RNQESATLNQ MQRQRWGQVE CPDQFKCARD NIPHWLTSKK
0801: QTIDVLCIGR MTDPVSQKTT APLPQATNDR RKEQDLMEKI LLEEVKQLQA QVTTLAEECR HRSLKVQLYK RKLEETWLIV KDEATKCKAA KEIIKILTNQ
0901: RNALSNKLLD DLELDDSSIV PDPPDKTHVT GKIPPLNSIR DQHNNNIEEV DMQSTTSSNT AVVDNSAVHQ NGRRASNSST GWYDGGTDST IAPTDSNGVI
1001: EQIERGVYIT VVTSPSGNKG IKRIRFSRKH FGEAEAQKWW EDNESKINCI LGSITIQLYT NWGLSLTGTG WSL
0101: GESSLDLVCK DRDQAECWYL GLTALISVSC TPLLLVNSTN SRRINSCTNS PPSYIQQRNR LFAVHDGRNF TKVHSLYGSP RLIQNKYLHS NLDCSEPFFS
0201: PRQKAWSELD SYLEKISPEL VNRVKNNLRD IRSAETIKDQ RIIQMPKLKQ SEGSNAATDS LKDIFVWGDV LGRMSDHGHV PATNISLPRL LKSSQILNVQ
0301: SIACGEKHAA IVTKQGQVFS WGEENGGRLG HKTSDSVSDP KIIDSLASTP VKTIAFGAKY TCAVSVSGEL YEWGEGIHSL GFGKNQCQRS PWFPHKLIST
0401: SDGISVLKIA CGQWHTAIIS SLGKLYTYGY GTFGVLGHGD THSVVHPKEV ESLRGSRAKS VACGPWHTAA IVETSGTLKS SAPGGKLFTW GDAGGGKLGH
0501: TNKKSKLVPT RVESLIDCDF TQVSCGMSLT AVLTITGVVF TIGSKEHGQL GNSRSDNTSI CMVEGPLKTE FVKDISCGSS HVAVLTMNGK VFTWGKGTEG
0601: QLGLGDYVDR SSPTLVEALE DKQVDSIACS SNFTAVTCVH REISSKDQSV CSSCRLAFRF TRKKHNCYNC GSMFCNSCSS NKVQRAALAP DKSKRCRVCD
0701: ACFNELNKTA QHGKMSCGSK TQKEESSLTE TRTYTPKLSR MLKEANFIME KMGSAQSPNQ RNQESATLNQ MQRQRWGQVE CPDQFKCARD NIPHWLTSKK
0801: QTIDVLCIGR MTDPVSQKTT APLPQATNDR RKEQDLMEKI LLEEVKQLQA QVTTLAEECR HRSLKVQLYK RKLEETWLIV KDEATKCKAA KEIIKILTNQ
0901: RNALSNKLLD DLELDDSSIV PDPPDKTHVT GKIPPLNSIR DQHNNNIEEV DMQSTTSSNT AVVDNSAVHQ NGRRASNSST GWYDGGTDST IAPTDSNGVI
1001: EQIERGVYIT VVTSPSGNKG IKRIRFSRKH FGEAEAQKWW EDNESKINCI LGSITIQLYT NWGLSLTGTG WSL
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.