CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002544_P004	Maize	cytosol, endoplasmic reticulum, nucleus	90.72	87.21
TraesCS2D01G457000.1	Wheat	cytosol, nucleus, peroxisome	65.98	68.82
TraesCS2B01G478900.1	Wheat	cytosol, nucleus, peroxisome	66.07	68.38
TraesCS2A01G456700.1	Wheat	cytosol, nucleus, peroxisome	66.07	67.02
Os04t0583700-00	Rice	cytosol	64.01	66.05
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	65.98	60.95
OQU85620	Sorghum	cytosol, mitochondrion, nucleus	54.83	54.52
GSMUA_Achr1P02140_001	Banana	cytosol	41.42	49.5
GSMUA_Achr5P11650_001	Banana	cytosol	43.02	47.32
CDX87986	Canola	cytosol	8.81	45.63
Solyc02g036390.1.1	Tomato	cytosol	31.49	42.8
AT1G65920.1	Thale cress	cytosol	38.52	40.85
CDY31624	Canola	cytosol	37.02	40.18
KRH30884	Soybean	cytosol	40.21	39.94
KRG98005	Soybean	cytosol	40.02	39.91
Bra038181.1-P	Field mustard	cytosol	37.3	39.72
CDX87989	Canola	cytosol	37.11	39.52
VIT_04s0079g00290.t01	Wine grape	cytosol	36.74	39.01
PGSC0003DMT400043094	Potato	nucleus	39.18	38.85
EES13137	Sorghum	cytosol	33.55	33.65
EES19890	Sorghum	cytosol	31.86	33.33
KXG34127	Sorghum	cytosol	28.68	33.19
KXG34192	Sorghum	cytosol	28.21	33.0
EES01332	Sorghum	cytosol	32.43	32.77
EES18851	Sorghum	cytosol, plastid	28.12	32.75
EES10837	Sorghum	cytosol	12.37	29.8
EER97183	Sorghum	mitochondrion	10.87	26.85
EES09892	Sorghum	mitochondrion	10.5	26.79
OQU87663	Sorghum	cytosol	9.37	24.75
KXG35074	Sorghum	cytosol	10.97	24.22
KXG25196	Sorghum	cytosol	8.72	23.79
OQU91404	Sorghum	cytosol	10.22	22.52
KXG26580	Sorghum	cytosol	11.15	22.16
EES12399	Sorghum	cytosol, plastid	10.97	22.12
EES07101	Sorghum	cytosol, plastid	10.31	20.56
Solyc02g081250.1.1	Tomato	cytosol	39.18	20.03

Protein Annotations

Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1B6PMV0	InterPro:Brevis_radix_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR000408	InterPro:IPR001849
InterPro:IPR009091	InterPro:IPR011993	InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455	EnsemblPlants:KXG26989
ProteinID:KXG26989	ProteinID:KXG26989.1	PFAM:PF00415	PFAM:PF01363	PFAM:PF08381	PFAM:PF16457
InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50178
PFscan:PS51514	PANTHER:PTHR22870	PANTHER:PTHR22870:SF177	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SMART:SM00064
EnsemblPlantsGene:SORBI_3006G191900	SUPFAM:SSF50729	SUPFAM:SSF50985	SUPFAM:SSF57903	UniParc:UPI00081AD4F2	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:54596778..54602763

Molecular Weight (calculated)

118163.0 Da

IEP (calculated)

8.952

GRAVY (calculated)

-0.427

Length

1067 amino acids

Sequence
(BLAST)

0001: MAGSFDGRTP TRGVEQAIVA LKKGAHILKC GKRGKPKFCA FRLSSDETTL IWYSKGREKH LSLSSVSAVV LGQKTIKFLR QRCPEKESHS FSLIYKNGER
0101: SLDLICSDRD QAEYWYLGLR ALLPTPCSPC SSIGSRSSRQ MDSCTNTPSS YVQLKSRLPS AHGTPRHIQV YSSHRNPKKA TFFGGSADCS EALFYPRQRT
0201: FSDIDTYLGK LTRKMSNPEI HGLQDIMVGN REKEEKITQT PKLKTFEGPR AACRLDSLKD VFFWGDAFGS ILDYDDTSKS LPMLVDSTNM LDVQSIACGE
0301: THAAIITKQG EVYSWGNESS GGIGNQVNIK VSRPKLVESV ASLHVKAVAY GSKHACAVTV SGELFEWGEG PHMGQLDCYA NNLWFPHKLF SPLDGISVVK
0401: IACGPWHTAI ITSSGQLYTY GDGTFGVLGH GDTQGTTRPK EVEYLKGSRV KCVACGPWHT AAIVEVLSDF KSNSPRSKLF TWGDADRGKL GHADKKMKLI
0501: PTCVDSLTDY DFIQVSCGMA LTVVLSITGV VFTIGSSMHG QLGNPHADGR TVCAVEGLLK TEFVRHISSG SSHVAVLTTN GKVFTWGKGK EGQLGLGDYL
0601: NRSTPTLVDA LEGRQVESIS CGYNYTAAVC LHKIISRKDL SVCSGCKMAF GFTRKKHNCY HCGSMFCNSC SSNKVARAAL APDKIRRYRV CDGCFSQLLR
0701: VVDSAKVKSE LKISKGAEII RSYTPKLSRI FRDANLPVEK VALVQRPNQR NEVPATPVQA KSQRWGQVEC PAQFLPGEDS FRYQSISKNH MCSASVSERM
0801: HDLTVLKSGR SLQQPNDDQR KDLNTTETLL TEEVKQLRSQ VTLLVEQYHQ KALQVELYKQ KLDETWLIVR DEAAKCKAAK DIIKVLTDQC KALSEKLLVG
0901: QQYEYLETKS NISQGQTLSA DLQHYPCEKL ARGKLGQLNN TKNHETSTEG DEEYTPSSSD VQVEGSRSHL NGSRTFDGNA CVTQGNSLVA RVTSNGVIEQ
1001: IERGVYVTFA VSPSGKKDIK RVRFSRKHFG EKEAQHWWEE NKGSVYAKYS TEKVRHQLEV TIQSVQE

Best Arabidopsis Sequence Match ( AT1G65920.1 )
(BLAST)

0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI

Arabidopsis Description

F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.