Factsheet for Solyc02g036390.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87986	Canola	cytosol	12.48	47.57
VIT_04s0079g00290.t01	Wine grape	cytosol	54.52	42.59
KRG98005	Soybean	cytosol	54.27	39.81
KRH30884	Soybean	cytosol	54.39	39.76
AT1G65920.1	Thale cress	cytosol	49.81	38.87
TraesCS6A01G261000.1	Wheat	cytosol	44.71	38.44
GSMUA_Achr1P02140_001	Banana	cytosol	43.57	38.3
CDY31624	Canola	cytosol	47.01	37.54
Bra038181.1-P	Field mustard	cytosol	47.77	37.43
CDX87989	Canola	cytosol	47.52	37.23
GSMUA_Achr5P11650_001	Banana	cytosol	44.33	35.88
Zm00001d017641_P004	Maize	cytosol	39.11	35.66
TraesCS2D01G457000.1	Wheat	cytosol, nucleus, peroxisome	45.35	34.8
TraesCS2B01G478900.1	Wheat	cytosol, nucleus, peroxisome	45.48	34.63
TraesCS2A01G456700.1	Wheat	cytosol, nucleus, peroxisome	45.35	33.84
TraesCS6D01G241800.1	Wheat	cytosol	44.71	33.08
Solyc03g116360.1.1	Tomato	cytosol	39.75	32.98
TraesCS6B01G288400.1	Wheat	cytosol	44.71	32.9
HORVU6Hr1G066460.5	Barley	cytosol	43.95	32.33
Os04t0583700-00	Rice	cytosol	42.29	32.11
Solyc05g007290.1.1	Tomato	endoplasmic reticulum	40.76	31.71
Zm00001d051479_P005	Maize	nucleus	43.18	31.51
KXG26989	Sorghum	cytosol	42.8	31.49
OQU85620	Sorghum	cytosol, mitochondrion, nucleus	42.8	31.31
Solyc11g065120.1.1	Tomato	cytosol	44.46	30.91
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	45.22	30.74
Zm00001d002544_P004	Maize	cytosol, endoplasmic reticulum, nucleus	43.06	30.45
Solyc07g042980.2.1	Tomato	cytosol	9.3	30.04
Solyc12g099740.1.1	Tomato	nucleus	38.34	29.37
Solyc03g005590.1.1	Tomato	cytosol, plastid	39.36	28.85
Solyc04g071040.2.1	Tomato	cytosol	39.62	27.62
Solyc05g006940.2.1	Tomato	cytosol	13.38	26.65
Solyc05g056590.2.1	Tomato	cytosol	9.3	26.55
Solyc02g081250.1.1	Tomato	cytosol	70.19	26.4
Solyc05g018620.2.1	Tomato	cytosol	10.32	26.38
Solyc02g085780.2.1	Tomato	cytosol	12.23	24.62
Solyc07g042970.2.1	Tomato	mitochondrion	7.52	24.48
Solyc07g063300.2.1	Tomato	plasma membrane	14.78	23.87
Solyc05g014030.2.1	Tomato	cytosol	14.39	21.2
Solyc02g089220.2.1	Tomato	mitochondrion	8.79	20.91
Solyc05g007280.2.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR000408	InterPro:IPR001849	InterPro:IPR009091	InterPro:IPR011993	InterPro:IPR013083
InterPro:IPR017455	UniProt:K4B5T2	PFAM:PF00415	PFAM:PF01363	PFAM:PF16457	InterPro:PH-like_dom_sf
InterPro:PH_domain	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50178	PANTHER:PTHR22870
PANTHER:PTHR22870:SF177	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SMART:SM00064	SUPFAM:SSF50729	SUPFAM:SSF50985
SUPFAM:SSF57903	EnsemblPlantsGene:Solyc02g036390.1	EnsemblPlants:Solyc02g036390.1.1	UniParc:UPI0002767739	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:30690305..30694216

Molecular Weight (calculated)

86216.5 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.405

Length

785 amino acids

Sequence
(BLAST)

001: MSEEHLAIVP SDRAVEQAII ALKKGALLKY GRRGKPKFCP LRLSADEKFL IWYSGEKENK LSLSAVTNII RGQNTVNQQK QLKAEMDSQC ISLIYGNDDH
101: SLDLICKDKV QAATWFLGLR AVISRSRHGL VDHMKNKRGV QSCISSPVGY LRRKHNLGFS LKKSRSSQVR SFSRSPTRSF SDKCNADGGL SCSSDIFLPL
201: SSVHNGMDNV IANSSSDDPR QKRATCVDTA IQYVLRDVFI WGEGGCFGDA GEVKMDALLP KLMESTTTLD VQTISIGSGH AALVTKQGEV FCWGEGKNGR
301: LGHKVDIDIS CPKIVDSLNG VHVKSVSCGE YHTCALTTSG ELYTWGDNLV VERKTRSYWL PSRVCGSSDG VKISHVACGV WHTGLVSTSG QLFTYGDGTF
401: GALGHGNCKS MAHPKEVESL RGLCVKSVAC GLRHTAALVE ISVHDHLKSN HCSVKLFTWG DGDNGNLGHS DNEMKLLPTR VSQLDDHDFI QVTCASTLTV
501: GLSNTGEVYT MGSLVDRQAK DKSLVAVQEK LKDKFVTQIS SGSNHVAVLT SKGNVYTWGK GSNGQLGLGD TKNRNFPALV EGLRDRQVEH IACGSNSTAA
601: ICLHKSISSS DQSVCRGCGT TFRITRKKHN CYNCGHSFCH ACCRKKTTNA SLSSDKTKTF RVCDPCFCQL RRASKKEKHS PRQAIDNSQE SNSISSRMMS
701: TRKYSSENNQ CLDPIESLLD DFPRWGQVPC PEFLRRGTEH SRNSSPSPTA RIMQDKLSES NKFLLEQVSK LRTQVHFPFS GFLKS

Best Arabidopsis Sequence Match ( AT1G65920.1 )
(BLAST)

0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI

Arabidopsis Description

F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.