Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g065120.1.1 | Tomato | cytosol | 88.2 | 80.07 |
| VIT_06s0009g03550.t01 | Wine grape | nucleus | 83.51 | 77.33 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 29.37 | 76.4 |
| KRH73555 | Soybean | nucleus | 82.05 | 75.9 |
| KRH14571 | Soybean | nucleus | 81.76 | 75.7 |
| KRG99075 | Soybean | nucleus | 80.0 | 74.14 |
| KRH45937 | Soybean | nucleus | 79.51 | 73.49 |
| KXG34127 | Sorghum | cytosol | 66.05 | 73.43 |
| AT5G12350.1 | Thale cress | nucleus | 74.73 | 71.26 |
| CDX85690 | Canola | nucleus | 73.27 | 70.19 |
| Bra008895.1-P | Field mustard | nucleus | 72.59 | 69.92 |
| CDX91165 | Canola | nucleus | 73.17 | 69.9 |
| CDX97187 | Canola | nucleus | 72.1 | 69.85 |
| CDX69686 | Canola | nucleus | 72.88 | 69.81 |
| Bra006504.1-P | Field mustard | cytosol | 75.12 | 69.81 |
| GSMUA_Achr8P00080_001 | Banana | endoplasmic reticulum | 63.61 | 69.73 |
| GSMUA_Achr5P08220_001 | Banana | cytosol | 74.24 | 69.18 |
| AT5G19420.2 | Thale cress | mitochondrion | 76.59 | 68.92 |
| CDY13998 | Canola | nucleus | 75.02 | 68.91 |
| CDX92532 | Canola | nucleus | 74.73 | 68.76 |
| Zm00001d042074_P001 | Maize | cytosol | 72.49 | 68.1 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 75.22 | 67.93 |
| Os05t0384800-01 | Rice | cytosol | 71.8 | 67.77 |
| Bra023374.1-P | Field mustard | nucleus | 73.46 | 67.72 |
| CDX70876 | Canola | cytosol | 73.37 | 67.44 |
| Bra002235.1-P | Field mustard | nucleus | 73.17 | 67.33 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 71.61 | 67.15 |
| TraesCS1B01G252700.2 | Wheat | cytosol | 71.71 | 67.12 |
| TraesCS1A01G240600.2 | Wheat | cytosol | 71.71 | 67.0 |
| Zm00001d011851_P001 | Maize | cytosol | 72.59 | 66.55 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 70.05 | 65.93 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 69.85 | 65.75 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 71.9 | 65.51 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 69.95 | 65.24 |
| Os01t0952300-00 | Rice | cytosol | 70.15 | 62.9 |
| Solyc05g007280.2.1 | Tomato | cytosol | 3.22 | 55.93 |
| Solyc05g007290.1.1 | Tomato | endoplasmic reticulum | 45.85 | 46.58 |
| Solyc03g116360.1.1 | Tomato | cytosol | 42.93 | 46.51 |
| Solyc04g071040.2.1 | Tomato | cytosol | 50.34 | 45.83 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 44.78 | 42.86 |
| Solyc02g036390.1.1 | Tomato | cytosol | 29.37 | 38.34 |
| Solyc05g018620.2.1 | Tomato | cytosol | 10.63 | 35.5 |
| Solyc05g006940.2.1 | Tomato | cytosol | 11.51 | 29.95 |
| Solyc05g056590.2.1 | Tomato | cytosol | 7.8 | 29.09 |
| Solyc07g042980.2.1 | Tomato | cytosol | 6.83 | 28.81 |
| Solyc02g085780.2.1 | Tomato | cytosol | 10.63 | 27.95 |
| Solyc07g042970.2.1 | Tomato | mitochondrion | 6.05 | 25.73 |
| Solyc02g089220.2.1 | Tomato | mitochondrion | 8.0 | 24.85 |
| Solyc07g063300.2.1 | Tomato | plasma membrane | 11.51 | 24.28 |
| Solyc05g014030.2.1 | Tomato | cytosol | 12.2 | 23.45 |
| Solyc02g081250.1.1 | Tomato | cytosol | 39.22 | 19.26 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | UniProt:K4DHZ5 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16627 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50003 | PFscan:PS50012 | PFscan:PS50178 |
| PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF301 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 |
| SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc12g099740.1 | EnsemblPlants:Solyc12g099740.1.1 | UniParc:UPI000276A862 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chr12:-:66757589..66762359
Molecular Weight (calculated)
110668.0 Da
IEP (calculated)
8.990
GRAVY (calculated)
-0.495
Length
1025 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPIFQRHPRP EKEYQSFSLI YNDRSLDLIC KDKEEAEVWF SGLKALISRG HQRKWRTDSR SDGIPSGATS PRTYTRRSSP LHSPFGSGDS SQKDGGDQLR
0101: LHSPYGSPPK TGVNKAFSDV ILYAVPPKGF FPSDSASASI HSLSSGGSND IHGQMKAMGM DNFRVSLSSA VSSSSQGSGH DDGDALGDVF MWGEGTGDGV
0201: LGGGPHRIDS CNGVKVDSLL PKALESAVVL DVQNLACSGK HAALVTKQGE MFSWGEESGG RLGHGVDSDV LHPKLIDSLS HTNIELVACG ENHSCAVTLS
0301: GELYTWGAGD FGLLGHGNEV SHWVPKRVNG PLEGIHVSYI SCGPWHTAVV TSAGQLFTFG DGTFGVLGHG DRKSISKPRE VESLKGLRTV RAACGVWHTA
0401: AVVEVMVGNS SSSNCSSGKL FTWGDGDKGR LGHGDKESKL VPTCVAALVE PNFCQVTCGH SLTVALTTSG HVYTMGSPVY GQLGHPQADG KLPCHVEGKL
0501: SKSFVEEIAC GAYHVAVLTS RTEVYTWGKG ANGRLGHGTT DDRNSPTLVE ALKDKQVKSI ACGTNFTAAI CLHKWASGVD QSMCSGCRLP FNFKRKRHNC
0601: YNCGLVFCHS CSSKKSLKTS MAPNPNKPYR VCDNCCNKLK KVIETDASSE ASMSRRGSLN QGLTDDIDKT TKLDIRSRPH LTRFSSMESF KQVETRSSKQ
0701: KKKFEFNSSR VSPIPSSNSQ LGALNSSKSS NQVFASSKKF FSASVPGSRI VSRATSPTSR RASPPRSTTP TPTLGGLTSP RIVVDDAKRT NGSLSQEVAK
0801: LRAQVETLTR KAQLQEVELE RTSKQLKEAI SIAGEETAKC KAAKEVIKSL TSQLKEMAER LQVGPGRNVK SPKSVSSESN ITSSDIPNGC IDQVHSQLTF
0901: QELETCVFNS HLLSNGSSNA SNRSAVHNRQ GNPEATTKNG GRTKECDSRN ENEWVEQDEP GVYITLTSLP GGVKDLKRVR FSRKRFSEKQ AEKWWAENRA
1001: RVYELYNVRV VDKASIGTAS VDLAH
0101: LHSPYGSPPK TGVNKAFSDV ILYAVPPKGF FPSDSASASI HSLSSGGSND IHGQMKAMGM DNFRVSLSSA VSSSSQGSGH DDGDALGDVF MWGEGTGDGV
0201: LGGGPHRIDS CNGVKVDSLL PKALESAVVL DVQNLACSGK HAALVTKQGE MFSWGEESGG RLGHGVDSDV LHPKLIDSLS HTNIELVACG ENHSCAVTLS
0301: GELYTWGAGD FGLLGHGNEV SHWVPKRVNG PLEGIHVSYI SCGPWHTAVV TSAGQLFTFG DGTFGVLGHG DRKSISKPRE VESLKGLRTV RAACGVWHTA
0401: AVVEVMVGNS SSSNCSSGKL FTWGDGDKGR LGHGDKESKL VPTCVAALVE PNFCQVTCGH SLTVALTTSG HVYTMGSPVY GQLGHPQADG KLPCHVEGKL
0501: SKSFVEEIAC GAYHVAVLTS RTEVYTWGKG ANGRLGHGTT DDRNSPTLVE ALKDKQVKSI ACGTNFTAAI CLHKWASGVD QSMCSGCRLP FNFKRKRHNC
0601: YNCGLVFCHS CSSKKSLKTS MAPNPNKPYR VCDNCCNKLK KVIETDASSE ASMSRRGSLN QGLTDDIDKT TKLDIRSRPH LTRFSSMESF KQVETRSSKQ
0701: KKKFEFNSSR VSPIPSSNSQ LGALNSSKSS NQVFASSKKF FSASVPGSRI VSRATSPTSR RASPPRSTTP TPTLGGLTSP RIVVDDAKRT NGSLSQEVAK
0801: LRAQVETLTR KAQLQEVELE RTSKQLKEAI SIAGEETAKC KAAKEVIKSL TSQLKEMAER LQVGPGRNVK SPKSVSSESN ITSSDIPNGC IDQVHSQLTF
0901: QELETCVFNS HLLSNGSSNA SNRSAVHNRQ GNPEATTKNG GRTKECDSRN ENEWVEQDEP GVYITLTSLP GGVKDLKRVR FSRKRFSEKQ AEKWWAENRA
1001: RVYELYNVRV VDKASIGTAS VDLAH
0001: MWSGFRDCTR NGRMTPSDLS RAGPVTRDIE QLKIELYSTF GVSKLDSSYI LENKNALHAI TALKKGAYLL KYGRRGKPKF CPFRLSNDES VLIWFSGKEE
0101: KHLKLSHVSR IISGQRTPIF QRYPRPEKEY QSFSLIYDER SLDLICKDKD EAEVWFSGLK ALISRCHQRK WRTESRSDGT PSEANSPRTY TRRSSPLHSP
0201: FSSNESFQKE GSNHLRLHSP YESPPKNGVD KAFSDMSLYA VPPKGFFPPG SATMSVHSLS SGGSDTLHGH MKGMGMDAFR VSLSSAISSS SHGSGHDDGD
0301: TLGDVFMWGE GIGEGVLGGG NHRVGSSLEI KMDSLLPKAL ESTIVLDVQN IACGGQHAVL VTKQGESFSW GEESEGRLGH GVDSNVQHPK LIDALNTTNI
0401: ELVACGEYHS CAVTLSGDLY TWGKGDFGIL GHGNEVSHWV PKRVNFLMEG IHVSSIACGP YHTAVVTSAG QLFTFGDGTF GVLGHGDRKS VFIPREVDSL
0501: KGLRTVRAAC GVWHTAAVVE VMVGSSSSSN CSSGKLFTWG DGDKSRLGHG DKEPKLVPTC VAALVEPNFC QVACGHSLTV ALTTSGHVYT MGSPVYGQLG
0601: NPHADGKVPT RVDGKLHKSF VEEIACGAYH VAVLTSRTEV YTWGKGSNGR LGHGDADDRN SPTLVESLKD KQVKSIACGS NFTAAVCLHK WASGMDQSMC
0701: SGCRQPFNFK RKRHNCYNCG LVFCHSCSNK KSLKACMAPN PNKPYRVCDR CFNKLKKAME TDPSSHSSLS RRESVNQGSD AIDRDEKLDT RSDGQLARFS
0801: LLEPMRQVDS RSKKNKKYEF NSSRVSPIPS GGSHRGSLNI TKSFNPTFGS SKKFFSASVP GSRIASRATS PISRRPSPPR STTPTPTLSG LTTPKIVVDD
0901: TKRSNDNLSQ EVVMLRSQVE NLTRKAQLQE VELERTTKQL KEALAIASEE SARCKAAKEV IKSLTAQLKD MAERLPVGSA RTVKSPSLNS FGSSPDYAAP
1001: SSNTLNRPNS RETDSDSLTT VPMFSNGTST PVFDSGSYRQ QANHAAEAIN RISTRSKESE PRNENEWVEQ DEPGVYITLT ALAGGARDLK RVRFSRKRFS
1101: EKQAEEWWAE NRGRVYEQYN VRIVVDKSSV GVGSEDLGH
0101: KHLKLSHVSR IISGQRTPIF QRYPRPEKEY QSFSLIYDER SLDLICKDKD EAEVWFSGLK ALISRCHQRK WRTESRSDGT PSEANSPRTY TRRSSPLHSP
0201: FSSNESFQKE GSNHLRLHSP YESPPKNGVD KAFSDMSLYA VPPKGFFPPG SATMSVHSLS SGGSDTLHGH MKGMGMDAFR VSLSSAISSS SHGSGHDDGD
0301: TLGDVFMWGE GIGEGVLGGG NHRVGSSLEI KMDSLLPKAL ESTIVLDVQN IACGGQHAVL VTKQGESFSW GEESEGRLGH GVDSNVQHPK LIDALNTTNI
0401: ELVACGEYHS CAVTLSGDLY TWGKGDFGIL GHGNEVSHWV PKRVNFLMEG IHVSSIACGP YHTAVVTSAG QLFTFGDGTF GVLGHGDRKS VFIPREVDSL
0501: KGLRTVRAAC GVWHTAAVVE VMVGSSSSSN CSSGKLFTWG DGDKSRLGHG DKEPKLVPTC VAALVEPNFC QVACGHSLTV ALTTSGHVYT MGSPVYGQLG
0601: NPHADGKVPT RVDGKLHKSF VEEIACGAYH VAVLTSRTEV YTWGKGSNGR LGHGDADDRN SPTLVESLKD KQVKSIACGS NFTAAVCLHK WASGMDQSMC
0701: SGCRQPFNFK RKRHNCYNCG LVFCHSCSNK KSLKACMAPN PNKPYRVCDR CFNKLKKAME TDPSSHSSLS RRESVNQGSD AIDRDEKLDT RSDGQLARFS
0801: LLEPMRQVDS RSKKNKKYEF NSSRVSPIPS GGSHRGSLNI TKSFNPTFGS SKKFFSASVP GSRIASRATS PISRRPSPPR STTPTPTLSG LTTPKIVVDD
0901: TKRSNDNLSQ EVVMLRSQVE NLTRKAQLQE VELERTTKQL KEALAIASEE SARCKAAKEV IKSLTAQLKD MAERLPVGSA RTVKSPSLNS FGSSPDYAAP
1001: SSNTLNRPNS RETDSDSLTT VPMFSNGTST PVFDSGSYRQ QANHAAEAIN RISTRSKESE PRNENEWVEQ DEPGVYITLT ALAGGARDLK RVRFSRKRFS
1101: EKQAEEWWAE NRGRVYEQYN VRIVVDKSSV GVGSEDLGH
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K148]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.