Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 4
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G543500.1 | Wheat | cytosol | 93.63 | 94.49 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 93.36 | 94.21 |
| KXG34127 | Sorghum | cytosol | 72.07 | 85.9 |
| Zm00001d042074_P001 | Maize | cytosol | 84.71 | 85.33 |
| Zm00001d011851_P001 | Maize | cytosol | 83.71 | 82.29 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 29.39 | 81.98 |
| Os01t0952300-00 | Rice | cytosol | 82.44 | 79.27 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 81.07 | 79.2 |
| GSMUA_Achr8P00080_001 | Banana | endoplasmic reticulum | 61.97 | 72.83 |
| GSMUA_Achr5P08220_001 | Banana | cytosol | 72.79 | 72.73 |
| KRH14571 | Soybean | nucleus | 72.16 | 71.64 |
| VIT_06s0009g03550.t01 | Wine grape | nucleus | 71.97 | 71.45 |
| KRH73555 | Soybean | nucleus | 71.97 | 71.39 |
| Solyc11g065120.1.1 | Tomato | cytosol | 73.07 | 71.12 |
| VIT_13s0067g03380.t01 | Wine grape | endoplasmic reticulum, extracellular | 70.61 | 70.67 |
| KRG99075 | Soybean | nucleus | 70.61 | 70.16 |
| Solyc12g099740.1.1 | Tomato | nucleus | 65.24 | 69.95 |
| KRH45937 | Soybean | nucleus | 70.25 | 69.61 |
| AT5G12350.1 | Thale cress | nucleus | 67.97 | 69.49 |
| Bra008895.1-P | Field mustard | nucleus | 66.88 | 69.08 |
| Bra006504.1-P | Field mustard | cytosol | 69.15 | 68.9 |
| CDX85690 | Canola | nucleus | 67.06 | 68.88 |
| CDX69686 | Canola | nucleus | 66.88 | 68.69 |
| CDX91165 | Canola | nucleus | 67.06 | 68.69 |
| CDX97187 | Canola | nucleus | 65.61 | 68.15 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 69.43 | 67.22 |
| CDX92532 | Canola | nucleus | 67.88 | 66.97 |
| CDX70876 | Canola | cytosol | 67.7 | 66.73 |
| AT5G19420.2 | Thale cress | mitochondrion | 69.15 | 66.73 |
| Bra023374.1-P | Field mustard | nucleus | 67.24 | 66.46 |
| CDY13998 | Canola | nucleus | 67.42 | 66.4 |
| Bra002235.1-P | Field mustard | nucleus | 66.52 | 65.62 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 43.95 | 51.22 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 39.22 | 47.52 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 37.22 | 45.04 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 6.82 | 44.91 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 43.13 | 44.05 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 41.77 | 43.67 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 35.67 | 36.74 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 14.65 | 36.51 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 14.19 | 35.29 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 35.67 | 33.94 |
| HORVU5Hr1G089510.1 | Barley | cytosol | 10.01 | 30.56 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 11.01 | 30.48 |
| HORVU7Hr1G062090.6 | Barley | cytosol | 10.01 | 26.57 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 11.01 | 25.21 |
| HORVU5Hr1G034530.6 | Barley | cytosol | 11.83 | 24.34 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 9.83 | 24.0 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 9.83 | 23.79 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A287MLI5 | InterPro:BRX_N |
| InterPro:Brevis_radix_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU3Hr1G107820 |
| EnsemblPlants:HORVU3Hr1G107820.4 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 |
| InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16627 |
| InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF212 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | SignalP:SignalP-noTM | UniParc:UPI000B4691A0 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:673603636..673609470
Molecular Weight (calculated)
118929.0 Da
IEP (calculated)
8.887
GRAVY (calculated)
-0.386
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFLISLLYIY IINILKCQTR SDTIFLLVDS GFWQAITALK KGAYLLKYGR RGKPKFCPFR LSNDESVLIW FSGKEEKHLR LSHVSRIMPG QRTAIFQRYP
0101: RPEKECQSFS LISHDRSLDI ICKDKDEAEV WFAGLKTLIS RSHQRKWRTG SRSDTISSAA TSPRIYTRQS SPLSSPFSSS DSLHKDFNEN YRLRSPYGSP
0201: PKNGLEKAFS DVVLYAAPPR SFLPSDSNAA SVHSMSSGQS DNTNGHSGGI PMDAFRISYS SAVSSSSHGS GYDDGDALGD VLIWGEGTGE GILGGGSSKI
0301: GSSSGAKIDC LVPKPLEFAV RLDVQNISCG GRHAALVSKQ GEIYSWGEES GGRLGHGVDC DVAHPKLIDA LTHMNIELVA CGEYHTCAVT LSGDLYTWGD
0401: GAFKFGLLGH GNDVSQWVPK KLHGPLEGIH VSSISCGPWH TAIVTSAGQL FTFGDGSFGV LGHGDRESLS VPKEVESLKG LRTVRAACGV WHTAAVVEVM
0501: VGNSSSSNCS SGKIFTWGDG DKGRLGHGDK ESRLVPTCVA ALVEPNFCQV ACGHSLTVAL TTSGNVYTMG SSVYGQLGNP QADGMLPVRV EGKLHKNFVE
0601: EISCGAYHVA VLTSRTEVYT WGKGANGRLG HGNTDDKNTP TLVEALKDKQ VRSVVCGTNF TAAICIHKWV SGVDQSMCSG CRQPFNLRRK RHNCYNCALV
0701: FCHSCSSKKS LKASLAPNQS KPYRVCDSCY SKLTKGTATD VYSSTKQGAA VQGFSDTVDE ELETRSNAKL SRISSMESFK HMDSRYSKKN KKFEFNSSRV
0801: SPVPNGGVSR SFNPVFGSSK KFLSASVPGS RIISRATSPV SRRSSPPRST TPTPTLRSLT SAGSVINGTK PTNDSRTEEV LSLKSQVDNL TRKSQHLEVE
0901: LERTTKQLKE AIAIAGEETA KCKAAKEVIK SLTVQLKGMA ERLPGGATKN GKLPPLPGIP IPSDISAIVT ESLGSPGSSG EQEQISDGSN GLLVPNGLSS
1001: VRNKAGHPEM TSNGSIPSDA ESQHEAEWVE QDEPGVYITL TALPGGARDL KRVRFSRKRF SETQAEEWWQ GNRARVYQQY NVHMVDKSIA AMDREIATH
0101: RPEKECQSFS LISHDRSLDI ICKDKDEAEV WFAGLKTLIS RSHQRKWRTG SRSDTISSAA TSPRIYTRQS SPLSSPFSSS DSLHKDFNEN YRLRSPYGSP
0201: PKNGLEKAFS DVVLYAAPPR SFLPSDSNAA SVHSMSSGQS DNTNGHSGGI PMDAFRISYS SAVSSSSHGS GYDDGDALGD VLIWGEGTGE GILGGGSSKI
0301: GSSSGAKIDC LVPKPLEFAV RLDVQNISCG GRHAALVSKQ GEIYSWGEES GGRLGHGVDC DVAHPKLIDA LTHMNIELVA CGEYHTCAVT LSGDLYTWGD
0401: GAFKFGLLGH GNDVSQWVPK KLHGPLEGIH VSSISCGPWH TAIVTSAGQL FTFGDGSFGV LGHGDRESLS VPKEVESLKG LRTVRAACGV WHTAAVVEVM
0501: VGNSSSSNCS SGKIFTWGDG DKGRLGHGDK ESRLVPTCVA ALVEPNFCQV ACGHSLTVAL TTSGNVYTMG SSVYGQLGNP QADGMLPVRV EGKLHKNFVE
0601: EISCGAYHVA VLTSRTEVYT WGKGANGRLG HGNTDDKNTP TLVEALKDKQ VRSVVCGTNF TAAICIHKWV SGVDQSMCSG CRQPFNLRRK RHNCYNCALV
0701: FCHSCSSKKS LKASLAPNQS KPYRVCDSCY SKLTKGTATD VYSSTKQGAA VQGFSDTVDE ELETRSNAKL SRISSMESFK HMDSRYSKKN KKFEFNSSRV
0801: SPVPNGGVSR SFNPVFGSSK KFLSASVPGS RIISRATSPV SRRSSPPRST TPTPTLRSLT SAGSVINGTK PTNDSRTEEV LSLKSQVDNL TRKSQHLEVE
0901: LERTTKQLKE AIAIAGEETA KCKAAKEVIK SLTVQLKGMA ERLPGGATKN GKLPPLPGIP IPSDISAIVT ESLGSPGSSG EQEQISDGSN GLLVPNGLSS
1001: VRNKAGHPEM TSNGSIPSDA ESQHEAEWVE QDEPGVYITL TALPGGARDL KRVRFSRKRF SETQAEEWWQ GNRARVYQQY NVHMVDKSIA AMDREIATH
0001: MWSGFRDCTR NGRMTPSDLS RAGPVTRDIE QLKIELYSTF GVSKLDSSYI LENKNALHAI TALKKGAYLL KYGRRGKPKF CPFRLSNDES VLIWFSGKEE
0101: KHLKLSHVSR IISGQRTPIF QRYPRPEKEY QSFSLIYDER SLDLICKDKD EAEVWFSGLK ALISRCHQRK WRTESRSDGT PSEANSPRTY TRRSSPLHSP
0201: FSSNESFQKE GSNHLRLHSP YESPPKNGVD KAFSDMSLYA VPPKGFFPPG SATMSVHSLS SGGSDTLHGH MKGMGMDAFR VSLSSAISSS SHGSGHDDGD
0301: TLGDVFMWGE GIGEGVLGGG NHRVGSSLEI KMDSLLPKAL ESTIVLDVQN IACGGQHAVL VTKQGESFSW GEESEGRLGH GVDSNVQHPK LIDALNTTNI
0401: ELVACGEYHS CAVTLSGDLY TWGKGDFGIL GHGNEVSHWV PKRVNFLMEG IHVSSIACGP YHTAVVTSAG QLFTFGDGTF GVLGHGDRKS VFIPREVDSL
0501: KGLRTVRAAC GVWHTAAVVE VMVGSSSSSN CSSGKLFTWG DGDKSRLGHG DKEPKLVPTC VAALVEPNFC QVACGHSLTV ALTTSGHVYT MGSPVYGQLG
0601: NPHADGKVPT RVDGKLHKSF VEEIACGAYH VAVLTSRTEV YTWGKGSNGR LGHGDADDRN SPTLVESLKD KQVKSIACGS NFTAAVCLHK WASGMDQSMC
0701: SGCRQPFNFK RKRHNCYNCG LVFCHSCSNK KSLKACMAPN PNKPYRVCDR CFNKLKKAME TDPSSHSSLS RRESVNQGSD AIDRDEKLDT RSDGQLARFS
0801: LLEPMRQVDS RSKKNKKYEF NSSRVSPIPS GGSHRGSLNI TKSFNPTFGS SKKFFSASVP GSRIASRATS PISRRPSPPR STTPTPTLSG LTTPKIVVDD
0901: TKRSNDNLSQ EVVMLRSQVE NLTRKAQLQE VELERTTKQL KEALAIASEE SARCKAAKEV IKSLTAQLKD MAERLPVGSA RTVKSPSLNS FGSSPDYAAP
1001: SSNTLNRPNS RETDSDSLTT VPMFSNGTST PVFDSGSYRQ QANHAAEAIN RISTRSKESE PRNENEWVEQ DEPGVYITLT ALAGGARDLK RVRFSRKRFS
1101: EKQAEEWWAE NRGRVYEQYN VRIVVDKSSV GVGSEDLGH
0101: KHLKLSHVSR IISGQRTPIF QRYPRPEKEY QSFSLIYDER SLDLICKDKD EAEVWFSGLK ALISRCHQRK WRTESRSDGT PSEANSPRTY TRRSSPLHSP
0201: FSSNESFQKE GSNHLRLHSP YESPPKNGVD KAFSDMSLYA VPPKGFFPPG SATMSVHSLS SGGSDTLHGH MKGMGMDAFR VSLSSAISSS SHGSGHDDGD
0301: TLGDVFMWGE GIGEGVLGGG NHRVGSSLEI KMDSLLPKAL ESTIVLDVQN IACGGQHAVL VTKQGESFSW GEESEGRLGH GVDSNVQHPK LIDALNTTNI
0401: ELVACGEYHS CAVTLSGDLY TWGKGDFGIL GHGNEVSHWV PKRVNFLMEG IHVSSIACGP YHTAVVTSAG QLFTFGDGTF GVLGHGDRKS VFIPREVDSL
0501: KGLRTVRAAC GVWHTAAVVE VMVGSSSSSN CSSGKLFTWG DGDKSRLGHG DKEPKLVPTC VAALVEPNFC QVACGHSLTV ALTTSGHVYT MGSPVYGQLG
0601: NPHADGKVPT RVDGKLHKSF VEEIACGAYH VAVLTSRTEV YTWGKGSNGR LGHGDADDRN SPTLVESLKD KQVKSIACGS NFTAAVCLHK WASGMDQSMC
0701: SGCRQPFNFK RKRHNCYNCG LVFCHSCSNK KSLKACMAPN PNKPYRVCDR CFNKLKKAME TDPSSHSSLS RRESVNQGSD AIDRDEKLDT RSDGQLARFS
0801: LLEPMRQVDS RSKKNKKYEF NSSRVSPIPS GGSHRGSLNI TKSFNPTFGS SKKFFSASVP GSRIASRATS PISRRPSPPR STTPTPTLSG LTTPKIVVDD
0901: TKRSNDNLSQ EVVMLRSQVE NLTRKAQLQE VELERTTKQL KEALAIASEE SARCKAAKEV IKSLTAQLKD MAERLPVGSA RTVKSPSLNS FGSSPDYAAP
1001: SSNTLNRPNS RETDSDSLTT VPMFSNGTST PVFDSGSYRQ QANHAAEAIN RISTRSKESE PRNENEWVEQ DEPGVYITLT ALAGGARDLK RVRFSRKRFS
1101: EKQAEEWWAE NRGRVYEQYN VRIVVDKSSV GVGSEDLGH
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K148]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.