Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 84.42 | 95.31 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 84.16 | 94.28 |
| TraesCS2A01G456700.1 | Wheat | cytosol, nucleus, peroxisome | 84.68 | 92.97 |
| Os04t0583700-00 | Rice | cytosol | 64.24 | 71.76 |
| KXG26989 | Sorghum | cytosol | 60.95 | 65.98 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 60.09 | 62.52 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 54.03 | 58.48 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 38.96 | 50.39 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 40.09 | 47.73 |
| CDX87986 | Canola | cytosol | 8.48 | 47.57 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 16.19 | 47.46 |
| Solyc02g036390.1.1 | Tomato | cytosol | 30.74 | 45.22 |
| AT1G65920.1 | Thale cress | cytosol | 36.1 | 41.45 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 35.84 | 41.19 |
| CDY31624 | Canola | cytosol | 34.81 | 40.9 |
| Bra038181.1-P | Field mustard | cytosol | 35.06 | 40.42 |
| PGSC0003DMT400043094 | Potato | nucleus | 37.32 | 40.06 |
| CDX87989 | Canola | cytosol | 34.63 | 39.92 |
| KRH30884 | Soybean | cytosol | 36.88 | 39.66 |
| KRG98005 | Soybean | cytosol | 36.62 | 39.53 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 34.81 | 35.73 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 33.94 | 35.67 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 5.02 | 34.73 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 31.52 | 33.83 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 26.32 | 33.52 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 30.13 | 33.11 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 25.89 | 32.93 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 26.41 | 32.34 |
| HORVU5Hr1G089510.1 | Barley | cytosol | 9.7 | 31.11 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 11.43 | 29.93 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 10.56 | 27.6 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 9.0 | 26.2 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 9.78 | 23.54 |
| HORVU7Hr1G062090.6 | Barley | cytosol | 8.4 | 23.43 |
| HORVU5Hr1G034530.6 | Barley | cytosol | 10.56 | 22.85 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 8.92 | 22.69 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 8.14 | 20.89 |
| Solyc02g081250.1.1 | Tomato | cytosol | 37.32 | 20.65 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A287JAD9 | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G104550 | EnsemblPlants:HORVU2Hr1G104550.10 |
| InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 |
| InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF16457 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI000B46B7F0 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:703976560..703982035
Molecular Weight (calculated)
127090.0 Da
IEP (calculated)
9.624
GRAVY (calculated)
-0.404
Length
1155 amino acids
Sequence
(BLAST)
(BLAST)
0001: LHVPKKTRTR LSSCVPDKKP NCRCRNASLS LSRFTFAAAP PATARGWRHS SPFSNHCPII SPPFLALFHS SSAPARPLSS QLHFHSPHCN LWHTTVHHLR
0101: ANASFRLSDD PTNPSSCHPS ACLICPHPAA MAGSFDGRMP TRGVEQAIVA LKKGAHLLKC GKRGKPKFCP FRLSSDEKTL VWYSRDREKH LSLNSVSIVV
0201: LGQKTTNFHR QRWPEKEHQS LSLVYRNGEC SLDLICRDRD QAECWHLGLT ALISGSSSPF SSVGSKSSRQ TTSCTTTPRS YIQRKSKLSA VHDTPRHKKV
0301: YPSYGSPKMT QKDLFGGYLD CSEALFYQRQ RTFSDVDSYL ERLSPKVANP VRHSLKDILV ANNKHKTPTI SRTPKVKAFE GPRAACRLDS LKDVFLWGDI
0401: VGSTLDSEDI PKALPRLVGS TKMLDVQSIA CGQNHAAIIT KQGEVFSWGK EGSGRLGHKV NDSAPCPKMV ESLASVHVKA VAFGSKHTCA VTVSGELFEW
0501: GEGAHSLGLL NNWHGRNQWL PHKLFGPMDN ISVSKIACGD WHTAIMTSSG QLFTYGDGTF GVLGHGNTQG IARPKEVESL KGLRVKSVAC GPWHTAAIVE
0601: GMSSFKCNAP IGNLFTWGDA DKGKLGHADK KMKLVPTCVD SLISHDFLQV SCGMALTVVL TSNGVVFTIG SSKHGKLGNP QADGESVCTV GGVLKNEFVT
0701: EISSGSSHVA VLTMNGKVFT WGKGADGQLG LGDYANRSSP TLVEALEGRQ VQSIACGSNF SAAICLHKGI SVKDQPICSR CQMVFNFTRK KHNCYNCGSM
0801: FCNSCSSNKT ANAALAPDRN RRYRVCDACF CQLEKVLYSG EVKPQPKISK GEMFKAEIMA YTPKLSRLFK EANLIVEKMA SVQGHNQRNM DSVDPVQVKT
0901: QRWGQVECPA KFLSAQDNFR HQLVPNNQMS GVSFSQRMHD AVGLKAGNSL RQSTDSQRDE MSMMERILTE EVKQLRSQVT ALAEQCQQKN LVVQVYKQRL
1001: DETWLLVRDE AAKCKAAKDI IKVLTNQCNA LSAKLSVGQQ PENLKITPNS IPEQAPSPGG SFSHRNIART FDRDGYTTEA DSVDTPVEGV IEQIERGVYV
1101: TLAVSSSGKK DIRRIRFSRK HFGEKAAQCW WEENKSRVYA NYSVEQAATP HPNRA
0101: ANASFRLSDD PTNPSSCHPS ACLICPHPAA MAGSFDGRMP TRGVEQAIVA LKKGAHLLKC GKRGKPKFCP FRLSSDEKTL VWYSRDREKH LSLNSVSIVV
0201: LGQKTTNFHR QRWPEKEHQS LSLVYRNGEC SLDLICRDRD QAECWHLGLT ALISGSSSPF SSVGSKSSRQ TTSCTTTPRS YIQRKSKLSA VHDTPRHKKV
0301: YPSYGSPKMT QKDLFGGYLD CSEALFYQRQ RTFSDVDSYL ERLSPKVANP VRHSLKDILV ANNKHKTPTI SRTPKVKAFE GPRAACRLDS LKDVFLWGDI
0401: VGSTLDSEDI PKALPRLVGS TKMLDVQSIA CGQNHAAIIT KQGEVFSWGK EGSGRLGHKV NDSAPCPKMV ESLASVHVKA VAFGSKHTCA VTVSGELFEW
0501: GEGAHSLGLL NNWHGRNQWL PHKLFGPMDN ISVSKIACGD WHTAIMTSSG QLFTYGDGTF GVLGHGNTQG IARPKEVESL KGLRVKSVAC GPWHTAAIVE
0601: GMSSFKCNAP IGNLFTWGDA DKGKLGHADK KMKLVPTCVD SLISHDFLQV SCGMALTVVL TSNGVVFTIG SSKHGKLGNP QADGESVCTV GGVLKNEFVT
0701: EISSGSSHVA VLTMNGKVFT WGKGADGQLG LGDYANRSSP TLVEALEGRQ VQSIACGSNF SAAICLHKGI SVKDQPICSR CQMVFNFTRK KHNCYNCGSM
0801: FCNSCSSNKT ANAALAPDRN RRYRVCDACF CQLEKVLYSG EVKPQPKISK GEMFKAEIMA YTPKLSRLFK EANLIVEKMA SVQGHNQRNM DSVDPVQVKT
0901: QRWGQVECPA KFLSAQDNFR HQLVPNNQMS GVSFSQRMHD AVGLKAGNSL RQSTDSQRDE MSMMERILTE EVKQLRSQVT ALAEQCQQKN LVVQVYKQRL
1001: DETWLLVRDE AAKCKAAKDI IKVLTNQCNA LSAKLSVGQQ PENLKITPNS IPEQAPSPGG SFSHRNIART FDRDGYTTEA DSVDTPVEGV IEQIERGVYV
1101: TLAVSSSGKK DIRRIRFSRK HFGEKAAQCW WEENKSRVYA NYSVEQAATP HPNRA
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.