Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 55.3 | 59.2 |
| CDX87986 | Canola | cytosol | 10.87 | 56.8 |
| KRG98005 | Soybean | cytosol | 52.23 | 52.52 |
| KRH30884 | Soybean | cytosol | 51.95 | 52.05 |
| AT1G65920.1 | Thale cress | cytosol | 47.4 | 50.7 |
| CDY31624 | Canola | cytosol | 45.54 | 49.85 |
| Bra038181.1-P | Field mustard | cytosol | 45.91 | 49.3 |
| Solyc02g081250.1.1 | Tomato | cytosol | 95.54 | 49.26 |
| CDX87989 | Canola | cytosol | 45.72 | 49.1 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 40.61 | 48.94 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 41.82 | 46.39 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 37.55 | 44.25 |
| Zm00001d017641_P004 | Maize | cytosol | 34.67 | 43.32 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 40.15 | 42.23 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 40.33 | 42.1 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 40.8 | 41.14 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 40.43 | 41.0 |
| TraesCS2A01G456700.1 | Wheat | cytosol, nucleus, peroxisome | 40.06 | 40.97 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 39.87 | 40.21 |
| Os04t0583700-00 | Rice | cytosol | 37.92 | 39.46 |
| KXG26989 | Sorghum | cytosol | 38.85 | 39.18 |
| Zm00001d051479_P005 | Maize | nucleus | 38.66 | 38.66 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 38.2 | 38.3 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 39.31 | 38.11 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 40.06 | 37.32 |
| PGSC0003DMT400059356 | Potato | cytosol | 35.04 | 36.57 |
| PGSC0003DMT400002081 | Potato | cytosol | 36.25 | 34.64 |
| PGSC0003DMT400034994 | Potato | cytosol | 33.09 | 34.4 |
| PGSC0003DMT400001620 | Potato | cytosol | 10.97 | 29.5 |
| PGSC0003DMT400003817 | Potato | cytosol | 9.85 | 27.75 |
| PGSC0003DMT400045467 | Potato | cytosol | 9.85 | 26.7 |
| PGSC0003DMT400003726 | Potato | cytosol | 11.34 | 26.18 |
| PGSC0003DMT400032346 | Potato | plasma membrane | 11.34 | 25.31 |
| PGSC0003DMT400032945 | Potato | extracellular | 9.11 | 25.06 |
| PGSC0003DMT400016865 | Potato | cytosol, extracellular, plastid | 3.81 | 23.7 |
| PGSC0003DMT400027900 | Potato | cytosol | 11.25 | 22.7 |
Protein Annotations
| EntrezGene:102586818 | Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N |
| InterPro:Brevis_radix_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0046872 |
| InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 |
| UniProt:M1BE28 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | EnsemblPlantsGene:PGSC0003DMG400016717 |
| PGSC:PGSC0003DMG400016717 | EnsemblPlants:PGSC0003DMT400043094 | InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 |
| PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF177 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI000295B74F | RefSeq:XP_006348176.1 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
Ran GTPase binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016717]
Coordinates
chr2:+:36899138..36906129
Molecular Weight (calculated)
119201.0 Da
IEP (calculated)
8.432
GRAVY (calculated)
-0.422
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEEHLTFDP SDRAVEQAIV ALKKGAHLLK YGRRGKPKFY PLRLSADEKF LIWYSGEKEN QLRLSSITNV IRGQSTVILQ PEMESQCISL IYGNGERTLD
0101: LICKDQMQAE TWFVGLRAVI SRTHHHRMVD SLKSKRGAHS CISSPAGYMR RKQNLGLSAK TIRLSQVRSL AGSPTQSFSE RCFTDGLSCT SESFFSESSL
0201: SNVMDNFTSC SSYFEPDDLS QTRASCAGTE IQTDMLAPLL PSSNESRPFG KNVLRDVFIW GEGAEGGCLG VGEVKLDGLS PKLLESTVML DVQAISIGRS
0301: HASIVTKQGE VFCWGEGKNG RLGHKHDMDT ARPKLVDSLN GVRVKSVSCG EYQTCALTFS GELYTWGDNS FCAELVGEEK KRSHWLPNRV CGSLDGVKIS
0401: YVACAEWHTA IVSTSGQLFT YGDGTFGVLG HGNLQSVAQP KEVESLRGLW VKCVACGPWH TAAVVEVIVD RLKFNNPGGK LFTWGDGDKG RLGHPGEETK
0501: LLPTCVAKLV EHDFIQVSCA STLTIALSST GKVYMMGSAV HGQLGNPEAK DKSLVLVQGK LREEFITEIS SGSYHVTVLT SRGSVYTWGK GANGQLGLGD
0601: TKDRSWPTLV ESLRDRQVEH IACGSSTTAA ICLHKSASST DQSSCKGCNM SFGITRKKQN CYNCGLLFCR TCCSKKTPNA SLAPDKTKAF RVCDPCFYQL
0701: QRIAQSSRSS KLENHSPRPL PITLKAVTCE KVERDEANTT SSRMMATRKY LTENNQCFDR RSANSLGESR QFSDPVTSLL DTFPRWGQVP CPKVFRRDYG
0801: QMRTQNAHAR NSLASASPTY FVEPKFVPSA GLNMEEDLKE SDKILLEEVC KLRTQVESLE RLCETRKEKI QECQQKVKEA WSVAKEEASK SKAAKEVIKA
0901: LTSRLQAMSE SFFAEAEANV QAIANVLQTT STYSDSQNHI GGHRIVVPLA NAQLEERNVD SLCGSPIVFS STLRSFYNKE NNVDSRSAEE SCREADHGQA
1001: GLRTSKVEWV EQYQLGVFIT LTVLPSGKKG LKRVRFSRKK FTEKEAKKWW EENQLSVYKK YDVEGYENVN QVLLKK
0101: LICKDQMQAE TWFVGLRAVI SRTHHHRMVD SLKSKRGAHS CISSPAGYMR RKQNLGLSAK TIRLSQVRSL AGSPTQSFSE RCFTDGLSCT SESFFSESSL
0201: SNVMDNFTSC SSYFEPDDLS QTRASCAGTE IQTDMLAPLL PSSNESRPFG KNVLRDVFIW GEGAEGGCLG VGEVKLDGLS PKLLESTVML DVQAISIGRS
0301: HASIVTKQGE VFCWGEGKNG RLGHKHDMDT ARPKLVDSLN GVRVKSVSCG EYQTCALTFS GELYTWGDNS FCAELVGEEK KRSHWLPNRV CGSLDGVKIS
0401: YVACAEWHTA IVSTSGQLFT YGDGTFGVLG HGNLQSVAQP KEVESLRGLW VKCVACGPWH TAAVVEVIVD RLKFNNPGGK LFTWGDGDKG RLGHPGEETK
0501: LLPTCVAKLV EHDFIQVSCA STLTIALSST GKVYMMGSAV HGQLGNPEAK DKSLVLVQGK LREEFITEIS SGSYHVTVLT SRGSVYTWGK GANGQLGLGD
0601: TKDRSWPTLV ESLRDRQVEH IACGSSTTAA ICLHKSASST DQSSCKGCNM SFGITRKKQN CYNCGLLFCR TCCSKKTPNA SLAPDKTKAF RVCDPCFYQL
0701: QRIAQSSRSS KLENHSPRPL PITLKAVTCE KVERDEANTT SSRMMATRKY LTENNQCFDR RSANSLGESR QFSDPVTSLL DTFPRWGQVP CPKVFRRDYG
0801: QMRTQNAHAR NSLASASPTY FVEPKFVPSA GLNMEEDLKE SDKILLEEVC KLRTQVESLE RLCETRKEKI QECQQKVKEA WSVAKEEASK SKAAKEVIKA
0901: LTSRLQAMSE SFFAEAEANV QAIANVLQTT STYSDSQNHI GGHRIVVPLA NAQLEERNVD SLCGSPIVFS STLRSFYNKE NNVDSRSAEE SCREADHGQA
1001: GLRTSKVEWV EQYQLGVFIT LTVLPSGKKG LKRVRFSRKK FTEKEAKKWW EENQLSVYKK YDVEGYENVN QVLLKK
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.