Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87989 | Canola | cytosol | 93.2 | 19.16 |
| CDY31624 | Canola | cytosol | 89.81 | 18.82 |
| AT1G65920.1 | Thale cress | cytosol | 82.04 | 16.8 |
| Solyc02g036390.1.1 | Tomato | cytosol | 47.57 | 12.48 |
| CDY66504 | Canola | cytosol | 48.54 | 12.12 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 50.0 | 11.53 |
| Zm00001d017641_P004 | Maize | cytosol | 47.57 | 11.38 |
| PGSC0003DMT400043094 | Potato | nucleus | 56.8 | 10.87 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 47.57 | 10.73 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 49.51 | 10.52 |
| KRH30884 | Soybean | cytosol | 52.91 | 10.15 |
| CDY48550 | Canola | cytosol | 48.06 | 10.1 |
| KRG98005 | Soybean | cytosol | 51.94 | 10.0 |
| CDX68076 | Canola | cytosol | 38.84 | 9.64 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 47.57 | 9.58 |
| CDX85076 | Canola | cytosol | 48.06 | 9.54 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 47.57 | 9.51 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 49.03 | 9.41 |
| CDY47138 | Canola | cytosol | 47.57 | 9.36 |
| CDX92532 | Canola | nucleus | 50.49 | 9.34 |
| CDX88324 | Canola | cytosol | 48.06 | 9.33 |
| TraesCS2A01G456700.1 | Wheat | cytosol, nucleus, peroxisome | 47.57 | 9.32 |
| Os04t0583700-00 | Rice | cytosol | 46.6 | 9.28 |
| CDY11586 | Canola | cytosol | 47.09 | 9.21 |
| Zm00001d051479_P005 | Maize | nucleus | 48.06 | 9.2 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 47.57 | 9.18 |
| CDX97187 | Canola | nucleus | 47.09 | 9.17 |
| CDX69686 | Canola | nucleus | 47.57 | 9.16 |
| CDX87557 | Canola | cytosol | 47.57 | 9.13 |
| CDX85690 | Canola | nucleus | 47.09 | 9.07 |
| CDY12764 | Canola | cytosol | 46.12 | 9.06 |
| CDY28580 | Canola | plasma membrane | 45.63 | 9.0 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 49.51 | 8.99 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 46.12 | 8.95 |
| CDX91165 | Canola | nucleus | 46.6 | 8.95 |
| CDY44086 | Canola | plasma membrane, vacuole | 45.63 | 8.94 |
| CDX77534 | Canola | cytosol | 48.06 | 8.91 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 46.12 | 8.9 |
| CDX70876 | Canola | cytosol | 48.06 | 8.88 |
| CDY13998 | Canola | nucleus | 48.06 | 8.87 |
| KXG26989 | Sorghum | cytosol | 45.63 | 8.81 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 41.75 | 8.56 |
| CDY49416 | Canola | cytosol | 46.12 | 8.49 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 47.57 | 8.48 |
| CDX77871 | Canola | cytosol | 38.84 | 8.43 |
| CDY21795 | Canola | cytosol | 38.84 | 8.36 |
| CDY34733 | Canola | cytosol | 13.59 | 8.36 |
| Zm00001d002544_P004 | Maize | cytosol, endoplasmic reticulum, nucleus | 44.66 | 8.29 |
| CDY46423 | Canola | cytosol | 13.59 | 7.39 |
| CDY16215 | Canola | cytosol | 13.59 | 7.25 |
| CDY02190 | Canola | mitochondrion | 15.05 | 7.0 |
| CDY51633 | Canola | mitochondrion | 15.05 | 6.98 |
| CDY39843 | Canola | cytosol | 13.59 | 6.93 |
| CDX69479 | Canola | cytosol | 13.11 | 6.8 |
| CDY26488 | Canola | cytosol | 13.11 | 6.78 |
| CDY44785 | Canola | mitochondrion | 14.08 | 6.7 |
| CDY40735 | Canola | mitochondrion | 14.08 | 6.64 |
| CDY43762 | Canola | cytosol | 13.59 | 6.54 |
| CDX84451 | Canola | cytosol | 14.08 | 6.5 |
| CDY60046 | Canola | cytosol | 14.08 | 6.47 |
| CDY31347 | Canola | cytosol | 13.59 | 6.42 |
| CDX81201 | Canola | cytosol | 13.59 | 6.36 |
| CDY57523 | Canola | cytosol | 14.08 | 6.16 |
| CDY43240 | Canola | cytosol | 14.08 | 6.14 |
| Solyc02g081250.1.1 | Tomato | cytosol | 57.28 | 5.65 |
| CDY56827 | Canola | cytosol | 10.19 | 4.4 |
| CDX97668 | Canola | cytosol | 10.19 | 4.4 |
| CDX99731 | Canola | cytosol, plastid | 10.68 | 4.11 |
| CDY04192 | Canola | cytosol | 9.71 | 4.07 |
| CDY39172 | Canola | cytosol | 9.71 | 4.07 |
| CDY01845 | Canola | plastid | 10.19 | 4.06 |
| CDX96062 | Canola | plastid | 10.19 | 4.05 |
| CDY14709 | Canola | nucleus | 13.11 | 3.91 |
| CDY56518 | Canola | cytosol, plastid | 9.22 | 3.65 |
| CDY28863 | Canola | cytosol | 9.22 | 3.65 |
| CDX83586 | Canola | cytosol, plastid | 9.22 | 3.59 |
| CDY13609 | Canola | cytosol | 9.22 | 3.59 |
| CDY40988 | Canola | cytosol, plastid | 8.74 | 3.28 |
| CDY69131 | Canola | cytosol | 4.85 | 3.12 |
| CDY20113 | Canola | endoplasmic reticulum, extracellular | 10.19 | 2.55 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 10.19 | 2.54 |
| CDY70949 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078DFE6 | EnsemblPlants:CDX87986 | ProteinID:CDX87986 |
| ProteinID:CDX87986.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00147361001 | InterPro:IPR000408 |
| InterPro:IPR009091 | InterPro:IPR013083 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFscan:PS50012 |
| PFscan:PS50178 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF177 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI0004EF4C47 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | : | : | : | : | : |
Description
BnaC03g54100D
Coordinates
chrLK031853:-:1460890..1461510
Molecular Weight (calculated)
22668.3 Da
IEP (calculated)
9.315
GRAVY (calculated)
-0.267
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSIHGQLG CPRAKDKSIN TVLGNLTRQF VKEIACGSHH VAVLTSFGNV YIWGKGANRL LGLGDVRDRN SPVLVESLGD RLVKTIACGL SLTAVICLHK
101: DISLTDQNAC SSCKSAFGFT RKKHNCYNCG PLFCNACSSK KAVNAFLAPN KGKLSRVCDS CFNHLWRITE FSNKVKMENR TPRMQLVTNA RRVSDERTET
201: ESEDQI
101: DISLTDQNAC SSCKSAFGFT RKKHNCYNCG PLFCNACSSK KAVNAFLAPN KGKLSRVCDS CFNHLWRITE FSNKVKMENR TPRMQLVTNA RRVSDERTET
201: ESEDQI
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.