Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021109.1-P | Field mustard | endoplasmic reticulum, extracellular | 97.82 | 98.18 |
| CDY21840 | Canola | endoplasmic reticulum, extracellular | 96.48 | 96.37 |
| CDY56827 | Canola | cytosol | 54.3 | 93.92 |
| CDX97668 | Canola | cytosol | 54.3 | 93.92 |
| AT3G15430.2 | Thale cress | cytosol | 53.58 | 90.57 |
| PGSC0003DMT400003817 | Potato | cytosol | 33.33 | 71.99 |
| KRH22127 | Soybean | cytosol | 41.7 | 70.93 |
| VIT_19s0014g03080.t01 | Wine grape | cytosol | 41.82 | 70.12 |
| PGSC0003DMT400032346 | Potato | plasma membrane | 40.0 | 68.46 |
| Solyc07g063300.2.1 | Tomato | plasma membrane | 40.24 | 68.31 |
| KRH27216 | Soybean | cytosol | 41.21 | 67.33 |
| GSMUA_Achr5P12060_001 | Banana | mitochondrion | 34.42 | 62.83 |
| Zm00001d019595_P001 | Maize | cytosol | 36.36 | 62.11 |
| KXG35074 | Sorghum | cytosol | 36.36 | 62.11 |
| GSMUA_Achr1P00100_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.97 | 61.99 |
| TraesCS2B01G254900.2 | Wheat | cytosol | 36.12 | 61.57 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 36.12 | 61.57 |
| Zm00001d005395_P001 | Maize | cytosol | 36.0 | 61.49 |
| TraesCS2A01G236300.4 | Wheat | cytosol | 35.88 | 60.29 |
| GSMUA_Achr2P10610_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.52 | 59.55 |
| KRH49501 | Soybean | cytosol | 11.76 | 56.07 |
| CDY04192 | Canola | cytosol | 15.88 | 26.63 |
| CDY39172 | Canola | cytosol | 15.76 | 26.42 |
| CDY43762 | Canola | cytosol | 13.7 | 26.4 |
| CDY69131 | Canola | cytosol | 10.18 | 26.17 |
| CDX84451 | Canola | cytosol | 13.82 | 25.56 |
| CDY60046 | Canola | cytosol | 13.82 | 25.45 |
| CDY28863 | Canola | cytosol | 16.0 | 25.38 |
| CDX81201 | Canola | cytosol | 13.45 | 25.23 |
| CDY56518 | Canola | cytosol, plastid | 15.76 | 25.0 |
| CDY31347 | Canola | cytosol | 13.21 | 25.0 |
| CDY01845 | Canola | plastid | 15.64 | 24.95 |
| CDX96062 | Canola | plastid | 15.64 | 24.9 |
| CDX83586 | Canola | cytosol, plastid | 15.88 | 24.76 |
| CDY13609 | Canola | cytosol | 15.76 | 24.57 |
| CDX99731 | Canola | cytosol, plastid | 15.88 | 24.49 |
| CDY34733 | Canola | cytosol | 9.7 | 23.88 |
| CDY46423 | Canola | cytosol | 10.91 | 23.75 |
| CDY40988 | Canola | cytosol, plastid | 15.64 | 23.5 |
| CDY39843 | Canola | cytosol | 11.39 | 23.27 |
| CDX69479 | Canola | cytosol | 10.91 | 22.67 |
| CDY26488 | Canola | cytosol | 10.79 | 22.36 |
| CDY16215 | Canola | cytosol | 10.42 | 22.28 |
| CDY44785 | Canola | mitochondrion | 11.03 | 21.02 |
| CDY40735 | Canola | mitochondrion | 11.03 | 20.82 |
| CDY02190 | Canola | mitochondrion | 10.55 | 19.64 |
| CDY51633 | Canola | mitochondrion | 10.55 | 19.59 |
| CDY57523 | Canola | cytosol | 11.15 | 19.53 |
| CDY43240 | Canola | cytosol | 11.15 | 19.49 |
| CDY70949 | Canola | cytosol | 7.03 | 16.38 |
| CDY66504 | Canola | cytosol | 15.15 | 15.15 |
| CDY14709 | Canola | nucleus | 11.88 | 14.18 |
| CDX69686 | Canola | nucleus | 15.88 | 12.24 |
| CDX85076 | Canola | cytosol | 15.39 | 12.24 |
| CDX77534 | Canola | cytosol | 16.24 | 12.06 |
| CDX91165 | Canola | nucleus | 15.64 | 12.02 |
| CDX97187 | Canola | nucleus | 15.39 | 12.0 |
| CDX88324 | Canola | cytosol | 15.39 | 11.97 |
| CDY47138 | Canola | cytosol | 15.15 | 11.94 |
| CDX87557 | Canola | cytosol | 15.52 | 11.93 |
| CDX85690 | Canola | nucleus | 15.39 | 11.87 |
| CDY28580 | Canola | plasma membrane | 14.91 | 11.78 |
| CDY11586 | Canola | cytosol | 15.03 | 11.78 |
| CDY12764 | Canola | cytosol | 14.91 | 11.74 |
| CDY21795 | Canola | cytosol | 13.58 | 11.7 |
| CDY31624 | Canola | cytosol | 13.94 | 11.7 |
| CDX77871 | Canola | cytosol | 13.45 | 11.7 |
| CDY48550 | Canola | cytosol | 13.82 | 11.63 |
| CDX92532 | Canola | nucleus | 15.64 | 11.58 |
| CDY44086 | Canola | plasma membrane, vacuole | 14.67 | 11.5 |
| CDY13998 | Canola | nucleus | 15.52 | 11.47 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 15.64 | 11.37 |
| CDX87989 | Canola | cytosol | 13.7 | 11.28 |
| CDY49416 | Canola | cytosol | 15.03 | 11.08 |
| CDX70876 | Canola | cytosol | 14.91 | 11.03 |
| CDX87986 | Canola | cytosol | 2.55 | 10.19 |
| CDX68076 | Canola | cytosol | 8.0 | 7.95 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:35.1 | UniProt:A0A078G662 | EnsemblPlants:CDY20113 | ProteinID:CDY20113 | ProteinID:CDY20113.1 |
| EnsemblPlantsGene:GSBRNA2T00009969001 | InterPro:IPR000408 | InterPro:IPR009091 | PFAM:PF00415 | PFAM:PF13540 | PRINTS:PR00633 |
| ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF302 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SUPFAM:SSF50985 | SignalP:SignalP-noTM | UniParc:UPI0004EF46E3 | SEG:seg | : | : |
Description
BnaA01g28890DBnaA01g28890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G662]
Coordinates
chrLK032103:-:233641..237989
Molecular Weight (calculated)
87698.9 Da
IEP (calculated)
7.076
GRAVY (calculated)
-0.266
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKGHQGKCF GFVLLLCFFS STFARRILKD LDHVVKPGKV SLREQDHGLF SLEPDHKVKP GHNPQSAWWG EPEEPEDKVK PDHKLQSMWR ELEEPDPEKK
101: HAHKVMPDYK ENLNDGGKEK IDDIEKPDHP DHVVKPNYKE KLNDKEKIDG IEKPDHTVKP MGYGYGVGYG SGGSGFGEGI GSSGGSGFGE GIGSSGGSGF
201: GEGIGSSGGS GFGEGIGYGD GSGVGIGEGR GSGYGQPNCG PVRGAPGTGF GEGIGRGSGS GEGIGIGRGG SGSTGVPSVV VPPITVPGTT IPPITVPGTH
301: IPGFTIPGVT VPGFGTGGGC QTGEFRWSLE TLFLKKMAER NWLVSLEDLP SHLILEVLTS GRLNAVDLLS LELTSKVFGG SSGLLYPLKF RSLADYAASQ
401: LCSVHPVYVG MGLTTQKELF ANCEGNWKRL LRFLQSVDQS SDMVQTSAGN MQVTTGRYHT LLINNSKVYS CGSSLSGVLA HGPETTQCVA FTPIEFPFSA
501: KVAQVSATQN HSAFVLQSGE VLTCGDNSSH CCGHLDTSRP IFRPKLVEAL KGTPCKQVAA GLHFSVFLSR EGRVFTCGSN THGQLGHGDT LDSPVPRAVE
601: FFQSVGPVVQ IATGPSYVLA VTQDGSVYSF GSGSSFCLGH GEQQDEHQPR VIQAFKRKGV HILRVSAGDE HAVALDSNGR VYTWGKGYCG ALGHGDENDK
701: ITPQVLVSLN NCLAVQVCAR KRKTFVLVEG GVLYGFGWMG FGSLGFPDRG VSDKVLRPRV LESLKPHRVS QVSTGLYHTI VVTEGGRIFG FGDNERAQLG
801: HDSLRTCLEP TEIFLHCGHS RSQVC
101: HAHKVMPDYK ENLNDGGKEK IDDIEKPDHP DHVVKPNYKE KLNDKEKIDG IEKPDHTVKP MGYGYGVGYG SGGSGFGEGI GSSGGSGFGE GIGSSGGSGF
201: GEGIGSSGGS GFGEGIGYGD GSGVGIGEGR GSGYGQPNCG PVRGAPGTGF GEGIGRGSGS GEGIGIGRGG SGSTGVPSVV VPPITVPGTT IPPITVPGTH
301: IPGFTIPGVT VPGFGTGGGC QTGEFRWSLE TLFLKKMAER NWLVSLEDLP SHLILEVLTS GRLNAVDLLS LELTSKVFGG SSGLLYPLKF RSLADYAASQ
401: LCSVHPVYVG MGLTTQKELF ANCEGNWKRL LRFLQSVDQS SDMVQTSAGN MQVTTGRYHT LLINNSKVYS CGSSLSGVLA HGPETTQCVA FTPIEFPFSA
501: KVAQVSATQN HSAFVLQSGE VLTCGDNSSH CCGHLDTSRP IFRPKLVEAL KGTPCKQVAA GLHFSVFLSR EGRVFTCGSN THGQLGHGDT LDSPVPRAVE
601: FFQSVGPVVQ IATGPSYVLA VTQDGSVYSF GSGSSFCLGH GEQQDEHQPR VIQAFKRKGV HILRVSAGDE HAVALDSNGR VYTWGKGYCG ALGHGDENDK
701: ITPQVLVSLN NCLAVQVCAR KRKTFVLVEG GVLYGFGWMG FGSLGFPDRG VSDKVLRPRV LESLKPHRVS QVSTGLYHTI VVTEGGRIFG FGDNERAQLG
801: HDSLRTCLEP TEIFLHCGHS RSQVC
001: MADRNCLISF EDLPSHLILE VLTSGRLSAV DLLSLELTSK VFGGSHGFYP LKFRSLADYA ASQLCSMHPV YVGMGLTTQK ELFANCEGNW KRLFSFLQSV
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
101: EQSSDMVETS QGKMQIATGK YHTLLINNSK VYSCGVSLSG VLAHGSETTQ CVAFTPIEFP FPAQVAQVSA TQNHSAFVLQ SGQVLTCGDN SSHCCGHLDT
201: SRPIFRPKLV EALKGTPCKQ VAAGLHFTVF LSREGHAYTC GSNTHGQLGH GDTLDRPVPK VVEFLKTIGP VVQIAAGPSY VLAVTQDGSV YSFGSGSNFC
301: LGHGEQQDEL QPRVIQAFKR KGIHILRVSA GDEHAVALDS NGRVYTWGKG YCGALGHGDE NDKITPQVLV NLNNCLAVQV CARKRKTFVL VEGGLLYGFG
401: WMGFGSLGFP DRGVSDKVLR PRVLECLKPH RVSQVSTGLY HTIVVTQRGR IFGFGDNERA QLGHDSLRGC LEPTEIFLHC GRSRSRLC
Arabidopsis Description
MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.