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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28580 Canola plasma membrane 97.05 97.8
Bra007876.1-P Field mustard cytosol, nucleus, plasma membrane 96.1 87.31
AT1G69710.1 Thale cress cytosol 79.75 80.6
VIT_12s0057g00540.t01 Wine grape cytosol, mitochondrion 10.36 58.6
KRH45886 Soybean nucleus 50.0 55.25
VIT_01s0026g02170.t01 Wine grape cytosol 46.48 53.85
KRG99112 Soybean cytosol 48.38 51.94
PGSC0003DMT400059356 Potato cytosol 49.24 50.24
GSMUA_Achr4P00510_001 Banana cytosol 43.92 48.07
CDX85690 Canola nucleus 48.29 47.48
CDX91165 Canola nucleus 48.19 47.25
CDX69686 Canola nucleus 47.53 46.73
CDX97187 Canola nucleus 46.67 46.41
CDX87986 Canola cytosol 8.94 45.63
CDX92532 Canola nucleus 48.19 45.51
CDY70949 Canola cytosol 15.11 44.92
CDY13998 Canola nucleus 47.53 44.8
CDX88891 Canola cytosol, mitochondrion, nucleus 48.1 44.58
CDX70876 Canola cytosol 47.05 44.39
CDY66504 Canola cytosol 34.6 44.12
TraesCS7A01G185400.1 Wheat cytosol 42.02 43.68
TraesCS7B01G090600.1 Wheat cytosol 42.11 43.43
TraesCS7D01G187100.3 Wheat cytosol 41.92 43.19
CDX77871 Canola cytosol 38.5 42.68
HORVU7Hr1G038070.12 Barley cytosol 38.02 42.42
CDY21795 Canola cytosol 38.31 42.11
CDY47138 Canola cytosol 41.73 41.93
CDX88324 Canola cytosol 41.92 41.56
CDY11586 Canola cytosol 41.54 41.5
CDX87557 Canola cytosol 41.83 41.01
CDY48550 Canola cytosol 36.6 39.29
CDX85076 Canola cytosol 37.74 38.25
CDY12764 Canola cytosol 37.36 37.5
CDX68076 Canola cytosol 28.61 36.27
CDX77534 Canola cytosol 37.45 35.46
CDY49416 Canola cytosol 37.17 34.94
CDY31624 Canola cytosol 32.6 34.89
CDX87989 Canola cytosol 32.6 34.23
CDY46423 Canola cytosol 11.79 32.72
CDY69131 Canola cytosol 9.89 32.4
GSMUA_Achr7P20980_001 Banana cytosol 43.73 31.66
CDY16215 Canola cytosol 11.5 31.35
CDY43762 Canola cytosol 12.45 30.61
CDY31347 Canola cytosol 12.55 30.28
CDX84451 Canola cytosol 12.83 30.27
CDY39843 Canola cytosol 11.6 30.2
CDX81201 Canola cytosol 12.55 30.0
CDY60046 Canola cytosol 12.55 29.46
CDY44785 Canola mitochondrion 11.98 29.1
CDY40735 Canola mitochondrion 11.88 28.6
CDY02190 Canola mitochondrion 11.69 27.77
CDY51633 Canola mitochondrion 11.69 27.7
CDY34733 Canola cytosol 8.46 26.57
CDY57523 Canola cytosol 11.79 26.33
CDY43240 Canola cytosol 11.79 26.27
CDX69479 Canola cytosol 9.89 26.2
CDY26488 Canola cytosol 9.89 26.13
CDY56827 Canola cytosol 11.41 25.16
CDX97668 Canola cytosol 11.31 24.95
CDX96062 Canola plastid 12.26 24.9
CDY01845 Canola plastid 12.07 24.56
CDY56518 Canola cytosol, plastid 11.79 23.85
CDY28863 Canola cytosol 11.79 23.85
CDY39172 Canola cytosol 11.12 23.78
CDY04192 Canola cytosol 11.12 23.78
CDY13609 Canola cytosol 11.79 23.44
CDX99731 Canola cytosol, plastid 11.79 23.18
CDX83586 Canola cytosol, plastid 11.6 23.06
CDY40988 Canola cytosol, plastid 11.6 22.22
CDY14709 Canola nucleus 11.98 18.23
CDY21840 Canola endoplasmic reticulum, extracellular 11.69 14.89
CDY20113 Canola endoplasmic reticulum, extracellular 11.5 14.67
Protein Annotations
Gene3D:2.130.10.30Gene3D:2.30.29.30Gene3D:3.30.40.10MapMan:35.1GO:A0A078I2R7UniProt:A0A078I2R7
InterPro:BRX_NInterPro:Brevis_radix_domEnsemblPlants:CDY44086ProteinID:CDY44086ProteinID:CDY44086.1ncoils:Coil
GO:GO:0003674GO:GO:0005488GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00079515001InterPro:IPR000408InterPro:IPR009091
InterPro:IPR011993InterPro:IPR013083InterPro:IPR013591InterPro:IPR017455PFAM:PF00415PFAM:PF01363
PFAM:PF08381PFAM:PF13713InterPro:PH-like_dom_sfPRINTS:PR00633ScanProsite:PS00626PFscan:PS50012
PFscan:PS50178PFscan:PS51514PANTHER:PTHR22870PANTHER:PTHR22870:SF183InterPro:RCC1/BLIP-IIInterPro:Reg_chr_condens
SMART:SM00064SUPFAM:SSF50729SUPFAM:SSF50985SUPFAM:SSF57903UniParc:UPI0004EE0E9AInterPro:Znf_FYVE
InterPro:Znf_FYVE-relInterPro:Znf_FYVE_PHDInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
BnaA02g14500DBnaA02g14500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2R7]
Coordinates
chrLK032578:+:200706..205403
Molecular Weight (calculated)
115660.0 Da
IEP (calculated)
8.571
GRAVY (calculated)
-0.419
Length
1052 amino acids
Sequence
(BLAST)
0001: MIETKIRIWT TSVHICLGCV LSFHQPVFLC ISHWKLILFD QIQQAITSLK KGSYLLKYGR RGKPKFCPFQ LTSDESTLVW YSGKEEKQIK LSQVLRIVPG
0101: QRTATFKRYP RPEKEYQSFS LICPDRSLDL ICKDKDEAEV WVVGLKALIT RVKISKWKNT IKPEITSPEC PTPQARRVSP FVSILDQVTQ PSTETSTPNR
0201: LGKVFSDIVS ITAPANNNQT EANTLNPNLY CPISPGNVEN PNSRFSTGGD LARLSLSSAV STSSHGSYHE EFDALGDVFL WGEAISDGVL SGTGKTLYST
0301: TEDALLPKAL ESTIVLDAQN IACGRCHAVL VTKQGEIFSW GEGTGGKLGH GLEKDTHQPK FISSVRGMNF KSLACGEFHT CAVTQSGDLY TWGDGTRNVD
0401: LLGHGSESSC WIPKRVTGVL QGMHVSYVAC GPWHTAVVAS SGQLFTFGDG CFGALGHGDR TSSSVPRVVE SLSEVRVMKV ACGFWHTAAV VEVTNEASDA
0501: ELYSSCGQLF TWGDGEKGQL GHGDNAEKLL PECVTSLADE KICQVACGHS LTVSLTSNGH VFTMGSPAYG QLGNPTAKEK VPSRVEGDIT ETCVEEIACG
0601: SHHVAVLTSK SEVYTWGKGL NGQLGHGTVE NKREPAVVGF LKEKQVKAIT CGSNFTAVIC LNKWVPGSEH SLCAGCRNPF NFRRKRHNCY NCGLIFCKVC
0701: SSRKSLRAAL APDMNKPYRV CYGCFTKLKR SRELSPPPPT PRTRNLLNMR KSTDVSEKTP KLLSPHSRIA SADSLVQYGE GRHSKRDVKP EVSNSNVFAL
0801: GSVQPAMSPL LRGSIAWPRI SKNMIVKVPG SRVSSRTASP VSVKSTSPRP SHEVTTDESK HIKDSFGQEI VGLKEHVEQL TSKTQQLEEE LEKTKRQLKV
0901: VTAMAADEAE ENRSAKEVIR SLTTQLKEMS GRVPQKDDTS TNLRHTEKET TLESQTQTSS QTHIRSMVPH DSQSENNLSK SFVNGHRRHN EKAERVVQDE
1001: PGVYLTLLSL PGGGNELKRV RFSRKQFTEE QAEKWWGENG GKACERHNIL VS
Best Arabidopsis Sequence Match ( AT1G69710.1 )
(BLAST)
0001: MCILELRLFA AASMADSLRT SFSERDVEQA ITSLKKGSYL LKYGRRGKPK FCPFQLTSDE SALVWYSGKE EKQIKLSQVL RIVPGQRTPT FKRYPRPEKE
0101: YQSFSLICPD RSLDLICKDK DEAEVWVVGL KSLITRVKVS KWKTTIKPEI TSAECPTPHA RRVSPFVTIL DQVIQPSNET STQTRLGKVF SDIVAITAPP
0201: SNNNQTEASG NLFCPFSPTP ANVENSNLRF STNDPFRLSL SSAVSTSSHG SYHEDFDALG DVFVWGESIS DGVLSGTGNS LNSTTEDALL PKALESTIVL
0301: DAQNIACGKC HAVLVTKQGE IFSWGEGKGG KLGHGLETDA QKPKFISSVR GLGFKSLACG DFHTCAITQS GDLYSWGDGT HNVDLLGHGN ESSCWIPKRV
0401: TGDLQGLYVS DVACGPWHTA VVASSGQLFT FGDGTFGALG HGDRRSTSVP REVESLIGLI VTKVACGVWH TAAVVEVTNE ASEAEVDSSR GQVFTWGDGE
0501: KGQLGHGDND TKLLPECVIS LTNENICQVA CGHSLTVSRT SRGHVYTMGS TAYGQLGNPT AKGNFPERVE GDIVEASVEE IACGSYHVAV LTSKSEIYTW
0601: GKGLNGQLGH GNVENKREPA VVGFLREKQV KAITCGSNFT AVICVHKWVP GSEHSLCAGC RNPFNFRRKR HNCYNCGLVF CKVCSSRKSL RAALAPDMNK
0701: PYRVCYGCFT KLKKSRESSP STPTSRTRKL LNMRKSTDVS ERDSLTQKFL SVNARLSSAD SSLHYSERRH HRRDLKPEVN NSNVFPSMNG SLQPVGSPFS
0801: KGSTALPKIP KNMMVKIPGS GMSSRTTSPV SVKSTSPRRS YEVAAAESKQ LKDSFNQDMA GLKEQVEQLA SKAHQLEEEL EKTKRQLKVV TAMAADEAEE
0901: NRSAKEVIRS LTTQLKEMAE KQSQKDSIST NSKHTDKEKS ETVTQTSNQT HIRSMVSQDS QNENNLTSKS FANGHRKQND KPEKVVQDEP GVYLTLLSLP
1001: GGGTELKRVR FSRKQFTEEQ AEKWWGENGA KVCERHNILV S
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I287]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.