Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G090600.1 | Wheat | cytosol | 96.77 | 96.86 |
| TraesCS7A01G185400.1 | Wheat | cytosol | 93.83 | 94.66 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 85.5 | 92.58 |
| VIT_12s0057g00540.t01 | Wine grape | cytosol, mitochondrion | 10.77 | 59.14 |
| VIT_01s0026g02170.t01 | Wine grape | cytosol | 46.03 | 51.76 |
| GSMUA_Achr4P00510_001 | Banana | cytosol | 47.5 | 50.47 |
| KRH45886 | Soybean | nucleus | 46.91 | 50.32 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 52.6 | 49.13 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 52.3 | 49.04 |
| VIT_17s0000g05980.t01 | Wine grape | endoplasmic reticulum | 32.71 | 48.34 |
| KRG99112 | Soybean | cytosol | 46.33 | 48.27 |
| Solyc03g116360.1.1 | Tomato | cytosol | 42.8 | 46.19 |
| PGSC0003DMT400059356 | Potato | cytosol | 45.94 | 45.49 |
| AT1G69710.1 | Thale cress | cytosol | 43.88 | 43.04 |
| CDY28580 | Canola | plasma membrane | 43.0 | 42.05 |
| CDY44086 | Canola | plasma membrane, vacuole | 43.19 | 41.92 |
| CDX77871 | Canola | cytosol | 37.71 | 40.57 |
| CDY21795 | Canola | cytosol | 37.81 | 40.33 |
| Bra019511.1-P | Field mustard | cytosol | 37.71 | 40.23 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 34.67 | 38.94 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 39.86 | 38.65 |
| PGSC0003DMT400001620 | Potato | cytosol | 15.08 | 38.5 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 32.71 | 38.44 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 40.16 | 38.32 |
| Bra007876.1-P | Field mustard | cytosol, nucleus, plasma membrane | 43.19 | 38.08 |
| AT3G47660.4 | Thale cress | cytosol | 35.85 | 36.97 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 33.99 | 33.92 |
| GSMUA_Achr7P20980_001 | Banana | cytosol | 47.7 | 33.52 |
| TraesCS6D01G142500.1 | Wheat | golgi | 14.2 | 32.95 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 33.2 | 31.95 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 13.81 | 31.83 |
| TraesCS1D01G078800.1 | Wheat | mitochondrion | 11.36 | 27.68 |
| TraesCS7D01G282600.1 | Wheat | cytosol | 10.19 | 27.59 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 12.83 | 27.07 |
| TraesCS5D01G373300.1 | Wheat | mitochondrion | 11.36 | 26.48 |
| TraesCS5D01G177900.1 | Wheat | cytosol | 11.75 | 25.0 |
| TraesCS5D01G123500.1 | Wheat | mitochondrion, plastid | 5.39 | 24.66 |
| TraesCS3D01G312300.1 | Wheat | cytosol | 9.7 | 24.32 |
| TraesCS2D01G340500.1 | Wheat | cytosol | 9.21 | 21.46 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 |
| InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 |
| PFAM:PF08381 | PFAM:PF13713 | InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 |
| PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF244 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
| SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS7D01G187100 | EnsemblPlants:TraesCS7D01G187100.3 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 | TIGR:cd13365 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:139832594..139839197
Molecular Weight (calculated)
111325.0 Da
IEP (calculated)
8.343
GRAVY (calculated)
-0.378
Length
1021 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAADYLKNDP FERNVEQAIT TLKKGTHLLK YGRRGKPKFC PFRLSNDEAM LIWHSGRMEK KLNLIQVSKI IPGQRTAIFL RHPRPDKEHQ SFSLIYGQRS
0101: LDLICKDKDE AEAWFVALKA IISRRNCKKL TTTETKNDKP SYCSINQMHG DLPLASSCYS TDVGKKVSKG VQQCATNHDA RPFANFGNIF SDVILYAGQE
0201: RSRVSTGSVS SSNSSISGSA DTSDGGIAVD NNLRVSYSSA VSSCSYGSGD DFDAMGDVLL WGKGVGDGTL AYSSHLSGNL YGPRIDASLP KALESTVLLD
0301: IHNIACGSKH SVLVTKQGEM YSWGEESGGR LGHGVDTNLT HPKLISTLSG INIESVACGE FHTCAVSFCG DLYTWGDGMH NFGLLGHGND TAHWIPKKVC
0401: GPLEGLHISS VSCGPSHTAV VTSAGQLFTF GDGVFGALGH GDRQSTNVAR EVSSLRGLRT VLAACGAWHT VAIVEVVDSL NSATSCKLFT WGDGNKGQLG
0501: HADRETRLIP AYVESLRKLS FCQVACGYDF TAALSTSGQV YTMGSNAFGQ LGNPTIDGKL PTVVKGSISS SCVEEIACGS HHVALLTSKA RVYTWGNGAN
0601: GRLGHGNNFD RNTPTPVEAL KDKQVKSVAC GTDFTAVICF HRCTSGLDQS LCSGCRLQFS FIRKRHNCYN CGLVYCKACS MRKSTKASLA PNSNKPYRVC
0701: DECCTKLNTA GDAKKLQNSK PLDGNPHPLF SEATDRENTV KSLRVRLSRF LTMESFKPEG KHSRNNSRFP LHHSGNLSFG SIGHSKELTS LCIPTSTALP
0801: LSCGPISPHP TNRLTTSVLT SPDSACAYPS NKNMTEEVAR LQSQVKELTR KSELLEAELD RTNNQLREAR TTAAEENLKC KAAKEVISSL TTQIRSITER
0901: TPEECPVNDT WTSQVSKLLG SHFCENHLND VSRAPASSAH LAHQSPCKEN SIVADVEWTE QVEHGVYITI FRSPAGHKYL RRVRFSKRHF TEQQAERWWA
1001: EHRPTLHEQY GILTGDSIIP S
0101: LDLICKDKDE AEAWFVALKA IISRRNCKKL TTTETKNDKP SYCSINQMHG DLPLASSCYS TDVGKKVSKG VQQCATNHDA RPFANFGNIF SDVILYAGQE
0201: RSRVSTGSVS SSNSSISGSA DTSDGGIAVD NNLRVSYSSA VSSCSYGSGD DFDAMGDVLL WGKGVGDGTL AYSSHLSGNL YGPRIDASLP KALESTVLLD
0301: IHNIACGSKH SVLVTKQGEM YSWGEESGGR LGHGVDTNLT HPKLISTLSG INIESVACGE FHTCAVSFCG DLYTWGDGMH NFGLLGHGND TAHWIPKKVC
0401: GPLEGLHISS VSCGPSHTAV VTSAGQLFTF GDGVFGALGH GDRQSTNVAR EVSSLRGLRT VLAACGAWHT VAIVEVVDSL NSATSCKLFT WGDGNKGQLG
0501: HADRETRLIP AYVESLRKLS FCQVACGYDF TAALSTSGQV YTMGSNAFGQ LGNPTIDGKL PTVVKGSISS SCVEEIACGS HHVALLTSKA RVYTWGNGAN
0601: GRLGHGNNFD RNTPTPVEAL KDKQVKSVAC GTDFTAVICF HRCTSGLDQS LCSGCRLQFS FIRKRHNCYN CGLVYCKACS MRKSTKASLA PNSNKPYRVC
0701: DECCTKLNTA GDAKKLQNSK PLDGNPHPLF SEATDRENTV KSLRVRLSRF LTMESFKPEG KHSRNNSRFP LHHSGNLSFG SIGHSKELTS LCIPTSTALP
0801: LSCGPISPHP TNRLTTSVLT SPDSACAYPS NKNMTEEVAR LQSQVKELTR KSELLEAELD RTNNQLREAR TTAAEENLKC KAAKEVISSL TTQIRSITER
0901: TPEECPVNDT WTSQVSKLLG SHFCENHLND VSRAPASSAH LAHQSPCKEN SIVADVEWTE QVEHGVYITI FRSPAGHKYL RRVRFSKRHF TEQQAERWWA
1001: EHRPTLHEQY GILTGDSIIP S
0001: MCILELRLFA AASMADSLRT SFSERDVEQA ITSLKKGSYL LKYGRRGKPK FCPFQLTSDE SALVWYSGKE EKQIKLSQVL RIVPGQRTPT FKRYPRPEKE
0101: YQSFSLICPD RSLDLICKDK DEAEVWVVGL KSLITRVKVS KWKTTIKPEI TSAECPTPHA RRVSPFVTIL DQVIQPSNET STQTRLGKVF SDIVAITAPP
0201: SNNNQTEASG NLFCPFSPTP ANVENSNLRF STNDPFRLSL SSAVSTSSHG SYHEDFDALG DVFVWGESIS DGVLSGTGNS LNSTTEDALL PKALESTIVL
0301: DAQNIACGKC HAVLVTKQGE IFSWGEGKGG KLGHGLETDA QKPKFISSVR GLGFKSLACG DFHTCAITQS GDLYSWGDGT HNVDLLGHGN ESSCWIPKRV
0401: TGDLQGLYVS DVACGPWHTA VVASSGQLFT FGDGTFGALG HGDRRSTSVP REVESLIGLI VTKVACGVWH TAAVVEVTNE ASEAEVDSSR GQVFTWGDGE
0501: KGQLGHGDND TKLLPECVIS LTNENICQVA CGHSLTVSRT SRGHVYTMGS TAYGQLGNPT AKGNFPERVE GDIVEASVEE IACGSYHVAV LTSKSEIYTW
0601: GKGLNGQLGH GNVENKREPA VVGFLREKQV KAITCGSNFT AVICVHKWVP GSEHSLCAGC RNPFNFRRKR HNCYNCGLVF CKVCSSRKSL RAALAPDMNK
0701: PYRVCYGCFT KLKKSRESSP STPTSRTRKL LNMRKSTDVS ERDSLTQKFL SVNARLSSAD SSLHYSERRH HRRDLKPEVN NSNVFPSMNG SLQPVGSPFS
0801: KGSTALPKIP KNMMVKIPGS GMSSRTTSPV SVKSTSPRRS YEVAAAESKQ LKDSFNQDMA GLKEQVEQLA SKAHQLEEEL EKTKRQLKVV TAMAADEAEE
0901: NRSAKEVIRS LTTQLKEMAE KQSQKDSIST NSKHTDKEKS ETVTQTSNQT HIRSMVSQDS QNENNLTSKS FANGHRKQND KPEKVVQDEP GVYLTLLSLP
1001: GGGTELKRVR FSRKQFTEEQ AEKWWGENGA KVCERHNILV S
0101: YQSFSLICPD RSLDLICKDK DEAEVWVVGL KSLITRVKVS KWKTTIKPEI TSAECPTPHA RRVSPFVTIL DQVIQPSNET STQTRLGKVF SDIVAITAPP
0201: SNNNQTEASG NLFCPFSPTP ANVENSNLRF STNDPFRLSL SSAVSTSSHG SYHEDFDALG DVFVWGESIS DGVLSGTGNS LNSTTEDALL PKALESTIVL
0301: DAQNIACGKC HAVLVTKQGE IFSWGEGKGG KLGHGLETDA QKPKFISSVR GLGFKSLACG DFHTCAITQS GDLYSWGDGT HNVDLLGHGN ESSCWIPKRV
0401: TGDLQGLYVS DVACGPWHTA VVASSGQLFT FGDGTFGALG HGDRRSTSVP REVESLIGLI VTKVACGVWH TAAVVEVTNE ASEAEVDSSR GQVFTWGDGE
0501: KGQLGHGDND TKLLPECVIS LTNENICQVA CGHSLTVSRT SRGHVYTMGS TAYGQLGNPT AKGNFPERVE GDIVEASVEE IACGSYHVAV LTSKSEIYTW
0601: GKGLNGQLGH GNVENKREPA VVGFLREKQV KAITCGSNFT AVICVHKWVP GSEHSLCAGC RNPFNFRRKR HNCYNCGLVF CKVCSSRKSL RAALAPDMNK
0701: PYRVCYGCFT KLKKSRESSP STPTSRTRKL LNMRKSTDVS ERDSLTQKFL SVNARLSSAD SSLHYSERRH HRRDLKPEVN NSNVFPSMNG SLQPVGSPFS
0801: KGSTALPKIP KNMMVKIPGS GMSSRTTSPV SVKSTSPRRS YEVAAAESKQ LKDSFNQDMA GLKEQVEQLA SKAHQLEEEL EKTKRQLKVV TAMAADEAEE
0901: NRSAKEVIRS LTTQLKEMAE KQSQKDSIST NSKHTDKEKS ETVTQTSNQT HIRSMVSQDS QNENNLTSKS FANGHRKQND KPEKVVQDEP GVYLTLLSLP
1001: GGGTELKRVR FSRKQFTEEQ AEKWWGENGA KVCERHNILV S
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I287]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.