Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G347100.2 | Wheat | cytosol | 93.86 | 93.86 |
| TraesCS3A01G319000.1 | Wheat | cytosol | 93.61 | 92.93 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 90.42 | 81.06 |
| Os01t0777800-01 | Rice | cytosol | 76.9 | 78.05 |
| OQU87663 | Sorghum | cytosol | 73.96 | 74.5 |
| Zm00001d043280_P001 | Maize | cytosol | 73.71 | 73.53 |
| GSMUA_Achr6P29750_001 | Banana | cytosol | 53.81 | 55.16 |
| CDY46423 | Canola | cytosol | 46.68 | 50.13 |
| VIT_01s0026g01520.t01 | Wine grape | cytosol | 48.16 | 49.49 |
| CDY16215 | Canola | cytosol | 46.93 | 49.48 |
| Bra016304.1-P | Field mustard | cytosol | 44.72 | 49.32 |
| Solyc05g006940.2.1 | Tomato | cytosol | 47.67 | 49.24 |
| PGSC0003DMT400045467 | Potato | cytosol | 47.67 | 48.87 |
| CDY69131 | Canola | cytosol | 38.33 | 48.6 |
| AT1G27060.1 | Thale cress | cytosol | 45.95 | 48.45 |
| Bra024664.1-P | Field mustard | cytosol | 42.26 | 47.91 |
| KRH74759 | Soybean | nucleus | 44.96 | 32.5 |
| KRH69375 | Soybean | nucleus | 45.45 | 31.3 |
| CDY14709 | Canola | nucleus | 46.93 | 27.64 |
| TraesCS7D01G282600.1 | Wheat | cytosol | 24.32 | 26.26 |
| TraesCS1D01G078800.1 | Wheat | mitochondrion | 26.54 | 25.78 |
| TraesCS6D01G142500.1 | Wheat | golgi | 22.36 | 20.68 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 21.38 | 19.64 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 22.85 | 19.21 |
| TraesCS5D01G373300.1 | Wheat | mitochondrion | 19.66 | 18.26 |
| TraesCS5D01G123500.1 | Wheat | mitochondrion, plastid | 9.83 | 17.94 |
| TraesCS5D01G177900.1 | Wheat | cytosol | 20.64 | 17.5 |
| TraesCS2D01G340500.1 | Wheat | cytosol | 15.97 | 14.84 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 24.57 | 11.51 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.83 | 10.67 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 25.55 | 9.88 |
| TraesCS7D01G187100.3 | Wheat | cytosol | 24.32 | 9.7 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 25.55 | 9.52 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 23.83 | 9.48 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 24.57 | 9.35 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 24.82 | 9.27 |
| TraesCS6D01G241800.1 | Wheat | cytosol | 22.6 | 8.67 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G312300.1 | EnsemblPlantsGene:TraesCS3D01G312300 | Gene3D:2.130.10.30 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | PFAM:PF00415 | PFscan:PS50012 | PRINTS:PR00633 | ScanProsite:PS00626 | SEG:seg |
| SUPFAM:SSF50985 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:426883147..426886588
Molecular Weight (calculated)
43256.3 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.293
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLPQGAME KAAAAAAEEE PEEAWAWTWG AGTDGQLGNG GFQDHHLPQA LLLPPRCRGR VSFVAGGGAH AIALTSDGEV FTWGRGTHGQ LGHGNIENIP
101: HPKSVKFFEN YTVTCVSTGW NHSGFATDSG QLFMCGDGSF GQLGTGDNQS RNLPFEATSF TTKHVEKLAF GMRHSLVLLK DNSVYGFGSA RRGQVGKFAS
201: KNQKFYNTPR LIDGFPNCKI MNLYANGDHS AALDESGQLH IWGRALVGEH DDDQPRAAFP SLSISQVALG WHHALVLSGG ELYAIGAYRH QKCDPTVSEN
301: AVAQQLNLTT ASSIHHEPSS ASNLAKVPSI HGQQVTQIAA GTEHSALVTE SGALFTWGWG EHGQLGLGDT CDQVVPQRVN LGDEGSRSYA SLGVYCGSGF
401: TVAVGQA
101: HPKSVKFFEN YTVTCVSTGW NHSGFATDSG QLFMCGDGSF GQLGTGDNQS RNLPFEATSF TTKHVEKLAF GMRHSLVLLK DNSVYGFGSA RRGQVGKFAS
201: KNQKFYNTPR LIDGFPNCKI MNLYANGDHS AALDESGQLH IWGRALVGEH DDDQPRAAFP SLSISQVALG WHHALVLSGG ELYAIGAYRH QKCDPTVSEN
301: AVAQQLNLTT ASSIHHEPSS ASNLAKVPSI HGQQVTQIAA GTEHSALVTE SGALFTWGWG EHGQLGLGDT CDQVVPQRVN LGDEGSRSYA SLGVYCGSGF
401: TVAVGQA
001: MAEHGETQAD EEEEEQVWSW GAGTDGQLGT TKLQDELLPQ LLSLTSLPSI SMLACGGAHV IALTSGGKVF TWGRGSSGQL GHGDILNITL PKLVSFFDDS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS
Arabidopsis Description
At1g27060 [Source:UniProtKB/TrEMBL;Acc:A2RVN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.