Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G288400.1 | Wheat | cytosol | 97.36 | 96.81 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 82.75 | 96.17 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 92.18 | 91.66 |
| Zm00001d017641_P004 | Maize | cytosol | 57.3 | 70.62 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 70.12 | 69.34 |
| Zm00001d051479_P005 | Maize | nucleus | 68.14 | 67.19 |
| TraesCS2D01G457000.1 | Wheat | cytosol, nucleus, peroxisome | 59.85 | 62.07 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 43.17 | 51.29 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 45.05 | 49.28 |
| CDX87986 | Canola | cytosol | 8.95 | 46.12 |
| Solyc02g036390.1.1 | Tomato | cytosol | 33.08 | 44.71 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 39.21 | 41.39 |
| AT1G65920.1 | Thale cress | cytosol | 38.83 | 40.95 |
| KRG98005 | Soybean | cytosol | 41.28 | 40.93 |
| KRH30884 | Soybean | cytosol | 41.38 | 40.88 |
| CDY31624 | Canola | cytosol | 37.61 | 40.59 |
| PGSC0003DMT400043094 | Potato | nucleus | 41.0 | 40.43 |
| Bra038181.1-P | Field mustard | cytosol | 37.7 | 39.92 |
| CDX87989 | Canola | cytosol | 37.23 | 39.42 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 37.42 | 36.46 |
| TraesCS1D01G240700.1 | Wheat | cytosol | 36.76 | 35.68 |
| TraesCS3D01G522600.2 | Wheat | cytosol | 27.71 | 33.83 |
| TraesCS1D01G019900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 28.65 | 33.44 |
| TraesCS2D01G589800.1 | Wheat | cytosol | 33.65 | 33.36 |
| TraesCS7D01G187100.3 | Wheat | cytosol | 31.95 | 33.2 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 32.52 | 32.76 |
| TraesCS2D01G304900.2 | Wheat | cytosol | 12.16 | 29.12 |
| TraesCS6D01G142500.1 | Wheat | golgi | 11.4 | 27.5 |
| TraesCS1D01G078800.1 | Wheat | mitochondrion | 9.9 | 25.06 |
| TraesCS5D01G373300.1 | Wheat | mitochondrion | 10.27 | 24.89 |
| TraesCS2D01G241400.2 | Wheat | cytosol | 11.12 | 24.38 |
| TraesCS3D01G312300.1 | Wheat | cytosol | 8.67 | 22.6 |
| TraesCS7D01G282600.1 | Wheat | cytosol | 8.01 | 22.55 |
| TraesCS5D01G123500.1 | Wheat | mitochondrion, plastid | 4.71 | 22.42 |
| TraesCS5D01G177900.1 | Wheat | cytosol | 10.08 | 22.29 |
| Solyc02g081250.1.1 | Tomato | cytosol | 41.38 | 21.04 |
| TraesCS2D01G340500.1 | Wheat | cytosol | 7.92 | 19.18 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 |
| InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 |
| PFAM:PF08381 | PFAM:PF16457 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 |
| PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS6D01G241800 |
| EnsemblPlants:TraesCS6D01G241800.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd13365 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:344170226..344175714
Molecular Weight (calculated)
116336.0 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.400
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGELEGRSS GTRGAEQAIV ALKKGAHLLK CGKRGKPRFC PFRLSCDEKL LIWYSKEREK SLSLSSVSSV VLGQKTTNLL RLHWPEKEHH SLSVIYKNGE
0101: YSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR RINSCTNSPP SYIQQRNRLF SVDDTRKFTQ VHSLYGSPRL IQNKVSKSSL DCSEAFVTPR
0201: QRTWSDLDFY LERITPEMVN RVKNSFMDIP VAAKIQEGIT QMPKLKASEG SHMACGIDSL KDIFAWGEVP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
0301: VACGEKHAAI VTKQGEVFSW GKESGGILGH KVSVSVSEPT IIKSLSSIPM KAIAFGAKHT CALAISGELY EWGEGTHSLG LWDDQCQRSQ WFPHKLFDPL
0401: DGVSVLKIAC GQWHTAIISS SGQLFTYGDG TFGVLGHGDT MSVARPKEVE SLKGLRAKAV ACGPWHTAAI VEILGTVKSN APSGKLFTWG DADKGKLGHA
0501: DKKSKLVPTC VKPLNDSDFA QVSCAKALTV VLTITGVVFT IGSTLGNRRL SDTSICSVEG PLKTEFVRDI SSGSSHVAVL TMNGKVYTWG KGTEGQLGLG
0601: DYTDRSSPTL VESLEDKQVD SIACGSNFTL AVCLHRSISG KDQSVCSSCQ LSFTFTRKKH NCYNCGSMFC NSCSSNKVSR AALGPDRSKR YRVCDVCFTQ
0701: LQKIEGHGTL SSQSAIQKEE AFPTEIRPYT PKLSRIFKEA NSIMEKMTTA QGSNQRNQDL AAPVQLKTQR WGQVECPSQF KCARNNIPCC SIPNKQTVDV
0801: SLTQRMPEPV PPKGTSSMPE TATNLKAELD STENILLGEV KQLQAQVTTL AEQCRHRSLK VQLYKRKVEE TWLIIMNEAA KCKAAKEIIK VLTNQKNTLS
0901: KKIDLAGGQS YNSITIPSHG QPVKAELPDP PDKNPVTGKF QQLSSIRDHH QQVDRERIQS SSAAVAKGSA THRNGRRAPS NSNTYAGEND ATIPPVDPNG
1001: TIEQIERGVY VTVVTSPGGN KGVKRIRFSR KHFGEKEAQK WWEANESKVF AKYSGTEQVT E
0101: YSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR RINSCTNSPP SYIQQRNRLF SVDDTRKFTQ VHSLYGSPRL IQNKVSKSSL DCSEAFVTPR
0201: QRTWSDLDFY LERITPEMVN RVKNSFMDIP VAAKIQEGIT QMPKLKASEG SHMACGIDSL KDIFAWGEVP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
0301: VACGEKHAAI VTKQGEVFSW GKESGGILGH KVSVSVSEPT IIKSLSSIPM KAIAFGAKHT CALAISGELY EWGEGTHSLG LWDDQCQRSQ WFPHKLFDPL
0401: DGVSVLKIAC GQWHTAIISS SGQLFTYGDG TFGVLGHGDT MSVARPKEVE SLKGLRAKAV ACGPWHTAAI VEILGTVKSN APSGKLFTWG DADKGKLGHA
0501: DKKSKLVPTC VKPLNDSDFA QVSCAKALTV VLTITGVVFT IGSTLGNRRL SDTSICSVEG PLKTEFVRDI SSGSSHVAVL TMNGKVYTWG KGTEGQLGLG
0601: DYTDRSSPTL VESLEDKQVD SIACGSNFTL AVCLHRSISG KDQSVCSSCQ LSFTFTRKKH NCYNCGSMFC NSCSSNKVSR AALGPDRSKR YRVCDVCFTQ
0701: LQKIEGHGTL SSQSAIQKEE AFPTEIRPYT PKLSRIFKEA NSIMEKMTTA QGSNQRNQDL AAPVQLKTQR WGQVECPSQF KCARNNIPCC SIPNKQTVDV
0801: SLTQRMPEPV PPKGTSSMPE TATNLKAELD STENILLGEV KQLQAQVTTL AEQCRHRSLK VQLYKRKVEE TWLIIMNEAA KCKAAKEIIK VLTNQKNTLS
0901: KKIDLAGGQS YNSITIPSHG QPVKAELPDP PDKNPVTGKF QQLSSIRDHH QQVDRERIQS SSAAVAKGSA THRNGRRAPS NSNTYAGEND ATIPPVDPNG
1001: TIEQIERGVY VTVVTSPGGN KGVKRIRFSR KHFGEKEAQK WWEANESKVF AKYSGTEQVT E
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.