Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G241800.1 | Wheat | cytosol | 91.66 | 92.18 |
| TraesCS6A01G261000.1 | Wheat | cytosol | 78.82 | 92.11 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 91.38 | 91.38 |
| Zm00001d017641_P004 | Maize | cytosol | 56.7 | 70.27 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 69.26 | 68.87 |
| Zm00001d051479_P005 | Maize | nucleus | 66.92 | 66.36 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 58.48 | 54.03 |
| GSMUA_Achr1P02140_001 | Banana | cytosol | 42.83 | 51.18 |
| GSMUA_Achr5P11650_001 | Banana | cytosol | 44.61 | 49.07 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 17.15 | 46.45 |
| CDX87986 | Canola | cytosol | 8.9 | 46.12 |
| Solyc02g036390.1.1 | Tomato | cytosol | 32.33 | 43.95 |
| KRH30884 | Soybean | cytosol | 40.77 | 40.5 |
| KRG98005 | Soybean | cytosol | 40.58 | 40.47 |
| AT1G65920.1 | Thale cress | cytosol | 37.96 | 40.26 |
| CDY31624 | Canola | cytosol | 36.83 | 39.98 |
| VIT_04s0079g00290.t01 | Wine grape | cytosol | 37.58 | 39.9 |
| PGSC0003DMT400043094 | Potato | nucleus | 40.21 | 39.87 |
| Bra038181.1-P | Field mustard | cytosol | 36.83 | 39.22 |
| CDX87989 | Canola | cytosol | 36.55 | 38.92 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 36.74 | 35.67 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 36.83 | 34.93 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 28.49 | 33.48 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 28.3 | 33.3 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 33.36 | 33.09 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 32.33 | 32.83 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 27.65 | 31.28 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 4.87 | 31.14 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 11.9 | 28.8 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 11.53 | 27.83 |
| HORVU5Hr1G089510.1 | Barley | cytosol | 9.09 | 26.94 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 9.37 | 25.19 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 10.4 | 23.12 |
| HORVU7Hr1G062090.6 | Barley | cytosol | 8.25 | 21.26 |
| HORVU5Hr1G034530.6 | Barley | cytosol | 10.59 | 21.16 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 8.81 | 20.7 |
| Solyc02g081250.1.1 | Tomato | cytosol | 40.49 | 20.7 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 8.15 | 19.33 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU6Hr1G066460 | EnsemblPlants:HORVU6Hr1G066460.5 | InterPro:IPR000408 |
| InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 |
| UniProt:M0UNT9 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF16457 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF311 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI0002960A42 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:460086821..460095691
Molecular Weight (calculated)
116781.0 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.424
Length
1067 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGGLEGRSS GTKGAEQAIA ALKKGAHLLK CGKRGKPRFC PFRLSYDENL LIWYSKEREK SLSLSSVSSV VLGQKTTNLL RLHWPEKEPH SLSVIYKNGE
0101: CSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR RINSCTNSPP SYIQQRSRLF SVHDTRKFTQ VHSQYGSPRL IQNKVSKSSL DCSEAFASPR
0201: QRTWSGLDFY LERITPEMVN RVKNSFMDIP VAEKNQEGIT QMPKLKPSEG SHVACGTDLL KDIFVWGEVP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
0301: VACGENHAAI VTKQGEVFSW GKESGGILGH KVGASVSQPK IIESLASTPM KAIAFGAKHT CALAISGEIY EWGEGIHSLG RWDDHQCQRS QWFPHKLFDP
0401: VDGVSVLKIA CGQWHTAIIS SSGQLFTYGD GTFGVLGHGD TLSVARPKEV ESLKGLRAKA VACGPWHTAA IVEILGTVKS NAPSGKLFTW GDADRGKLGH
0501: ADKKSKLVPT CVKPLTESDF AQVSCAKALT VALTITGVVF TIGSTERGQL GNRRLSDTSI CSVEGPLKTE FVRDISSGSS HVAVLTMNGK VYTWGKGTEG
0601: QLGLGDYTDR SSPTLVESLE DKQVDNIACG SNFTVAVCLH RSVSGKDQSV CSSCQLSFTF TRKKHNCYNC GSMFCNSCSS NKVSRAALGP DRSKRYRVCD
0701: VCFTQLQKIE GHGTLSSRLA IQKDEAFPTE IRAYTPKLSR IFKEANSIME KMTTAQGSNQ RNQDLTATVQ LKTQRWGQVE CPSQFKCARN NIPFCSISNK
0801: QTAGASLTQR MPGPVAPKGT SSMPEAATNL KAELDSTENI LLGEVKHLQA QVTTLAEQCR HRSLKIQLYK RKVEETWLII MTEAAKCKAA KEIIKVLTNQ
0901: RNTLSKKILA GEQPYNSTRT PSCTTDGQPV KAELSDPPDK NPVTGKFQQL RSIKDHHQQQ VERERIQSSS AAMASGSIAH RDGRRAPSNS NIYAGETDAT
1001: VPPTDPNGAI EQIERGVYVT VVTSPGGNKG VKRIRFSRKH FGEKEAQKWW EANESKVFAK YSSTEQA
0101: CSLDLICKDK DQADCWYLGL TALVSALYSP LLLVDSTSSR RINSCTNSPP SYIQQRSRLF SVHDTRKFTQ VHSQYGSPRL IQNKVSKSSL DCSEAFASPR
0201: QRTWSGLDFY LERITPEMVN RVKNSFMDIP VAEKNQEGIT QMPKLKPSEG SHVACGTDLL KDIFVWGEVP GSVLENGDAP KDNVSLPRLL KPTQILDVQN
0301: VACGENHAAI VTKQGEVFSW GKESGGILGH KVGASVSQPK IIESLASTPM KAIAFGAKHT CALAISGEIY EWGEGIHSLG RWDDHQCQRS QWFPHKLFDP
0401: VDGVSVLKIA CGQWHTAIIS SSGQLFTYGD GTFGVLGHGD TLSVARPKEV ESLKGLRAKA VACGPWHTAA IVEILGTVKS NAPSGKLFTW GDADRGKLGH
0501: ADKKSKLVPT CVKPLTESDF AQVSCAKALT VALTITGVVF TIGSTERGQL GNRRLSDTSI CSVEGPLKTE FVRDISSGSS HVAVLTMNGK VYTWGKGTEG
0601: QLGLGDYTDR SSPTLVESLE DKQVDNIACG SNFTVAVCLH RSVSGKDQSV CSSCQLSFTF TRKKHNCYNC GSMFCNSCSS NKVSRAALGP DRSKRYRVCD
0701: VCFTQLQKIE GHGTLSSRLA IQKDEAFPTE IRAYTPKLSR IFKEANSIME KMTTAQGSNQ RNQDLTATVQ LKTQRWGQVE CPSQFKCARN NIPFCSISNK
0801: QTAGASLTQR MPGPVAPKGT SSMPEAATNL KAELDSTENI LLGEVKHLQA QVTTLAEQCR HRSLKIQLYK RKVEETWLII MTEAAKCKAA KEIIKVLTNQ
0901: RNTLSKKILA GEQPYNSTRT PSCTTDGQPV KAELSDPPDK NPVTGKFQQL RSIKDHHQQQ VERERIQSSS AAMASGSIAH RDGRRAPSNS NIYAGETDAT
1001: VPPTDPNGAI EQIERGVYVT VVTSPGGNKG VKRIRFSRKH FGEKEAQKWW EANESKVFAK YSSTEQA
0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI
Arabidopsis Description
F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.