Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G366800.1 | Wheat | cytosol | 95.43 | 96.07 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 95.81 | 95.63 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 95.15 | 95.33 |
| Os05t0545200-00 | Rice | cytosol | 75.64 | 78.4 |
| EES19890 | Sorghum | cytosol | 74.6 | 76.86 |
| Zm00001d038882_P002 | Maize | cytosol | 73.83 | 73.55 |
| CDY66504 | Canola | cytosol | 46.53 | 59.27 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 56.23 | 55.7 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 20.55 | 54.82 |
| CDY12764 | Canola | cytosol | 52.81 | 52.96 |
| PGSC0003DMT400034994 | Potato | cytosol | 52.14 | 52.95 |
| CDX85076 | Canola | cytosol | 52.24 | 52.89 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 53.85 | 52.85 |
| AT3G23270.2 | Thale cress | cytosol | 52.33 | 52.18 |
| Bra023740.1-P | Field mustard | cytosol | 52.05 | 51.31 |
| KRH31700 | Soybean | cytosol | 52.52 | 51.21 |
| KRH69117 | Soybean | cytosol | 52.33 | 51.02 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 8.09 | 50.9 |
| KRH00393 | Soybean | cytosol | 51.28 | 50.42 |
| AT4G14368.1 | Thale cress | cytosol | 52.14 | 49.55 |
| CDY49416 | Canola | cytosol | 52.71 | 49.51 |
| CDX77534 | Canola | cytosol | 52.05 | 49.23 |
| KRH40796 | Soybean | cytosol | 35.11 | 49.2 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 39.96 | 46.31 |
| HORVU2Hr1G124270.22 | Barley | cytosol, mitochondrion, nucleus | 46.24 | 45.17 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 38.44 | 44.49 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 43.67 | 41.77 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 50.14 | 41.5 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 43.39 | 40.53 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 39.3 | 39.48 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 34.73 | 38.71 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 32.83 | 32.33 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 12.84 | 30.61 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 33.11 | 30.13 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 12.65 | 30.09 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 10.94 | 28.97 |
| HORVU5Hr1G089510.1 | Barley | cytosol | 9.9 | 28.89 |
| HORVU7Hr1G062090.6 | Barley | cytosol | 10.56 | 26.81 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 10.56 | 24.45 |
| HORVU5Hr1G034530.6 | Barley | cytosol | 11.8 | 23.22 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 9.9 | 23.11 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 10.37 | 22.71 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU1Hr1G078890 | EnsemblPlants:HORVU1Hr1G078890.1 | InterPro:IPR000408 |
| InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | UniProt:M0UDR4 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 |
| PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF238 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI00029691D5 |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:-:521293226..521299732
Molecular Weight (calculated)
114377.0 Da
IEP (calculated)
8.631
GRAVY (calculated)
-0.422
Length
1051 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTPDDNALIT LKKGSKLIKY SRKGKPKIRE FRLSSDETAL VWYSHNKEKC LRLSSVSKII PGQRTAVFRR FLRPEKDYLS FSLIYKNGQR SLDLVCKDQA
0101: EVEVWFSTLE TLITSCRINF STDCQSDRIS FSDEVSQYQD VYDARLDIAS SINRTYYSAG YGAANSLNSS RADVRTNRAN MLRVSTGDSS RISISSSVPS
0201: SSSQGSGPDD IESLGDVYVW GEVWTDVLPP EGSSNFLCSK TDFLIPKPLE SDVVLDVQQI SCGSRHIALT TRQGEVFTWG EELGGRLGHG TFEDISRPKL
0301: VESLAVSNVE YIACGEFHTC AVTASGDLYN WGDGSYNAGL LGHGLGASHW LPKRVSGPLE GLQVLSVACG SWHSALAMSS GKVFTFGDGT FGALGHGNRE
0401: SVAYPKEVES LSGFRTMKVA CGVWHSAAIV ETNTGMNVVA RKLFTWGDGD KNRLGHGDKE ARLVPTVVQA LVDNNFHQVA CGHTMTVALA TSGHVFTMGS
0501: SNNGQLGNPK ADGKLPCQVQ DKLNSELVEE ISCGSYHVAV LTSRSEVFTW GMGANGRLGH GGIEDKKKPT IVDALKDRHV KSIACGSNFT TCICIHKWVS
0601: GADQSVCSGC RQPFGFTRKR HNCYNCGLVH CHACSSRKVL KAALAPTPGK PHRVCDSCFM KLKAADSGTS SPYNNKKSVM TRRSVDIKDK SERPDIRPSR
0701: LATAATAEPV KYADAKSVRS EIKPDPSSNA RAPQGPATAL AVPTTFVKPM GMGGMGGMGG MGGMGGMGGM GGMGGMGMGM GMGMNMAPMG MGMPMVSQSH
0801: KKPSPSPAMS SALSVKSDTK DIDNLKKTNE TLNQDISKLQ SQVNKLKQKC EVQDEQLQKS ERRAKSAASL AAEESTRRNS MLDFIRFLDT ELKGIVDKVP
0901: AEFSDSIKDL QSQSEKYLSG QCSHPPEAIS GNEQSRLPIG GMHEITHHIR SASMGTLDGS SLTSESPCHR IMESNGRAPG DFAPKYGTHG EVQLIEQFEP
1001: GVYVTLIQLR DGTKVFKRVR FSKRRFAEQQ AEEWWRENQE RVFRKYNHAP T
0101: EVEVWFSTLE TLITSCRINF STDCQSDRIS FSDEVSQYQD VYDARLDIAS SINRTYYSAG YGAANSLNSS RADVRTNRAN MLRVSTGDSS RISISSSVPS
0201: SSSQGSGPDD IESLGDVYVW GEVWTDVLPP EGSSNFLCSK TDFLIPKPLE SDVVLDVQQI SCGSRHIALT TRQGEVFTWG EELGGRLGHG TFEDISRPKL
0301: VESLAVSNVE YIACGEFHTC AVTASGDLYN WGDGSYNAGL LGHGLGASHW LPKRVSGPLE GLQVLSVACG SWHSALAMSS GKVFTFGDGT FGALGHGNRE
0401: SVAYPKEVES LSGFRTMKVA CGVWHSAAIV ETNTGMNVVA RKLFTWGDGD KNRLGHGDKE ARLVPTVVQA LVDNNFHQVA CGHTMTVALA TSGHVFTMGS
0501: SNNGQLGNPK ADGKLPCQVQ DKLNSELVEE ISCGSYHVAV LTSRSEVFTW GMGANGRLGH GGIEDKKKPT IVDALKDRHV KSIACGSNFT TCICIHKWVS
0601: GADQSVCSGC RQPFGFTRKR HNCYNCGLVH CHACSSRKVL KAALAPTPGK PHRVCDSCFM KLKAADSGTS SPYNNKKSVM TRRSVDIKDK SERPDIRPSR
0701: LATAATAEPV KYADAKSVRS EIKPDPSSNA RAPQGPATAL AVPTTFVKPM GMGGMGGMGG MGGMGGMGGM GGMGGMGMGM GMGMNMAPMG MGMPMVSQSH
0801: KKPSPSPAMS SALSVKSDTK DIDNLKKTNE TLNQDISKLQ SQVNKLKQKC EVQDEQLQKS ERRAKSAASL AAEESTRRNS MLDFIRFLDT ELKGIVDKVP
0901: AEFSDSIKDL QSQSEKYLSG QCSHPPEAIS GNEQSRLPIG GMHEITHHIR SASMGTLDGS SLTSESPCHR IMESNGRAPG DFAPKYGTHG EVQLIEQFEP
1001: GVYVTLIQLR DGTKVFKRVR FSKRRFAEQQ AEEWWRENQE RVFRKYNHAP T
0001: MADPASCYIY HERDVDQALV VLKKGTQLLK YSRKGKPKFR AFRLSPDEKT LIWFSRGEEK GLKLFEVSRI VPGQRTRFLR PEKDHLSFSL LYNNRERSLD
0101: LICKDKAETE VWFAALKFLI EKSRNRRARS EIPEIHDSDT FSVGRQSIDF VPSNIPRGRT SIDLGYQNNS DVGYERGNML RPSTDGFRIS VSSTPSCSSG
0201: GSGPDDIESL GDVYVWGEVW TEGILPDGTA SNETVKTDVL TPRPLESNVV LDVHQIVCGV RHVALVTRQG EVFTWGEEVG GRLGHGIQVD ISRPKLVEFL
0301: ALTNIDFVAC GEYHTCVVST SGDLFSWGDG IHNVGLLGHG SDISHWIPKR VSGPLEGLQV LSVACGTWHS ALATANGKLF TFGDGAFGVL GHGNRESVSY
0401: PKEVQSLNGL KTVKVACSIW HTAAIVEVMG QTATSMSSRK LFTWGDGDKN RLGHGNKETY LLPTCVSSLI DYNFHKIACG HTFTVALTTS GHVFTMGGTA
0501: HGQLGNSISD GKLPCLVQDR LVGEFVEEIA CGAHHVAVLT SRSEVFTWGK GANGRLGHGD TEDKRTPTLV EALRDRHVKS LSCGSNFTSS ICIHKWVSGA
0601: DQSICSGCRQ AFGFTRKRHN CYNCGLVHCH ACSSKKALKA ALAPTPGKPH RVCDACYSKL KAAESGYSSN VNRNVATPGR SIDGSVRTDR ETTRSSKVLL
0701: SANKNSVMSS SRPGFTPESS NARASQVPSL QQLKDIAFPS SLSAIQNAFK PVVAPTTTPP RTLVIGPSSP SPPPPPRSSS PYARRPSPPR TSGFSRSVID
0801: SLRKTNEVMN QEMTKLHSQQ RCNNQGTEIE RFQKAAKDAS ELAARQSSKH KAATEALKSV AEQLKELKEK LPPEVSESEA FESINSQAEA YLNANKVSET
0901: SPLTTSGQEQ ETYQKTEEQV PSNSSITETS SSSRAPSTEA SSSRISGKES KEQFEPGVYV TYEVDMNGNK IFRRVRFSKK RFDEHQAEDW WTKNKDRLLK
1001: CYSSNSSSSS SSSNPTASDS PVAPQPPSDP SVPEQSNEKE PDSET
0101: LICKDKAETE VWFAALKFLI EKSRNRRARS EIPEIHDSDT FSVGRQSIDF VPSNIPRGRT SIDLGYQNNS DVGYERGNML RPSTDGFRIS VSSTPSCSSG
0201: GSGPDDIESL GDVYVWGEVW TEGILPDGTA SNETVKTDVL TPRPLESNVV LDVHQIVCGV RHVALVTRQG EVFTWGEEVG GRLGHGIQVD ISRPKLVEFL
0301: ALTNIDFVAC GEYHTCVVST SGDLFSWGDG IHNVGLLGHG SDISHWIPKR VSGPLEGLQV LSVACGTWHS ALATANGKLF TFGDGAFGVL GHGNRESVSY
0401: PKEVQSLNGL KTVKVACSIW HTAAIVEVMG QTATSMSSRK LFTWGDGDKN RLGHGNKETY LLPTCVSSLI DYNFHKIACG HTFTVALTTS GHVFTMGGTA
0501: HGQLGNSISD GKLPCLVQDR LVGEFVEEIA CGAHHVAVLT SRSEVFTWGK GANGRLGHGD TEDKRTPTLV EALRDRHVKS LSCGSNFTSS ICIHKWVSGA
0601: DQSICSGCRQ AFGFTRKRHN CYNCGLVHCH ACSSKKALKA ALAPTPGKPH RVCDACYSKL KAAESGYSSN VNRNVATPGR SIDGSVRTDR ETTRSSKVLL
0701: SANKNSVMSS SRPGFTPESS NARASQVPSL QQLKDIAFPS SLSAIQNAFK PVVAPTTTPP RTLVIGPSSP SPPPPPRSSS PYARRPSPPR TSGFSRSVID
0801: SLRKTNEVMN QEMTKLHSQQ RCNNQGTEIE RFQKAAKDAS ELAARQSSKH KAATEALKSV AEQLKELKEK LPPEVSESEA FESINSQAEA YLNANKVSET
0901: SPLTTSGQEQ ETYQKTEEQV PSNSSITETS SSSRAPSTEA SSSRISGKES KEQFEPGVYV TYEVDMNGNK IFRRVRFSKK RFDEHQAEDW WTKNKDRLLK
1001: CYSSNSSSSS SSSNPTASDS PVAPQPPSDP SVPEQSNEKE PDSET
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.