Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G372300.1 | Wheat | cytosol | 97.9 | 97.53 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 95.71 | 96.17 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 95.33 | 95.15 |
| Os05t0545200-00 | Rice | cytosol | 74.93 | 77.51 |
| EES19890 | Sorghum | cytosol | 74.45 | 76.57 |
| Zm00001d038882_P002 | Maize | cytosol | 73.88 | 73.46 |
| CDY66504 | Canola | cytosol | 46.52 | 59.15 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 56.24 | 55.61 |
| CDX85076 | Canola | cytosol | 52.53 | 53.08 |
| PGSC0003DMT400034994 | Potato | cytosol | 52.34 | 53.04 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 54.05 | 52.94 |
| CDY12764 | Canola | cytosol | 52.43 | 52.48 |
| AT3G23270.2 | Thale cress | cytosol | 52.34 | 52.09 |
| Bra023740.1-P | Field mustard | cytosol | 52.24 | 51.41 |
| KRH31700 | Soybean | cytosol | 52.53 | 51.11 |
| KRH69117 | Soybean | cytosol | 52.53 | 51.11 |
| KRH00393 | Soybean | cytosol | 51.29 | 50.33 |
| CDX77534 | Canola | cytosol | 52.34 | 49.41 |
| AT4G14368.1 | Thale cress | cytosol | 52.05 | 49.37 |
| CDY49416 | Canola | cytosol | 52.62 | 49.33 |
| KRH40796 | Soybean | cytosol | 34.99 | 48.93 |
| TraesCS1B01G024400.1 | Wheat | cytosol, mitochondrion, nucleus | 39.28 | 45.42 |
| TraesCS2B01G609200.1 | Wheat | cytosol | 46.14 | 45.23 |
| TraesCS3B01G581600.2 | Wheat | cytosol | 38.42 | 44.19 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 43.57 | 41.97 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 50.43 | 41.65 |
| TraesCS1B01G252700.2 | Wheat | cytosol | 43.37 | 41.55 |
| TraesCS7B01G090600.1 | Wheat | cytosol | 38.99 | 40.1 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 39.37 | 39.48 |
| TraesCS2B01G478900.1 | Wheat | cytosol, nucleus, peroxisome | 33.37 | 33.95 |
| TraesCS6B01G288400.1 | Wheat | cytosol | 33.84 | 33.27 |
| TraesCS6B01G180900.1 | Wheat | cytosol | 11.92 | 30.86 |
| TraesCS2B01G323100.1 | Wheat | unclear | 12.77 | 30.32 |
| TraesCS7B01G200200.1 | Wheat | cytosol | 10.39 | 28.02 |
| TraesCS5B01G366300.1 | Wheat | mitochondrion | 11.25 | 26.94 |
| TraesCS3B01G347100.2 | Wheat | cytosol | 10.2 | 26.29 |
| TraesCS2B01G254900.2 | Wheat | cytosol | 11.63 | 25.21 |
| TraesCS5B01G170800.1 | Wheat | cytosol | 10.39 | 22.71 |
| TraesCS2B01G360200.1 | Wheat | cytosol | 11.53 | 22.24 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:Brevis_radix_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 |
| InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 |
| InterPro:PH-like_dom_sf | PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF238 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS1B01G384600 | EnsemblPlants:TraesCS1B01G384600.1 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00065 | TIGR:cd13365 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:-:617823969..617830653
Molecular Weight (calculated)
114037.0 Da
IEP (calculated)
8.525
GRAVY (calculated)
-0.429
Length
1049 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTPDDNALIT LKKGSKLIKY SRKGKPKIRE FRLSGDETAL VWYSHSKEKC LRLSSVSKII PGQRTAVFRR FLRPEKDYLS FSLIYKNGQR SLDLVCKDQA
0101: EVEVWFSTLE TLITAYRVNF PTDSDRISFS DEVSQYQDAY DTRLDIASSI NRTYYSAGYG AAYSLNSSRA DVRSDRANML RVSTGDSSRI SISSSIPSSS
0201: SQASGPDDIE SLGDVYVWGE VWTDVLPPEG SSNFLCSKTD VLIPKPLESD VVLDVQQISC GSRHIALTTR QGEVFTWGEE LGGRLGHGTD EDISRPKLVE
0301: SLAVSNVEYI ACGEFHTCAV TASGDLYNWG DGSYNAGLLG DGIGASHWLP KRVSGPLEGL QVLSVACGSW HSALAMSSGK VFTFGDGTFG ALGHGNRDSV
0401: AYPKEVESLS GFRTMKVACG IWHSAAIVET NSQTGVNLVS RKLFTWGDGD KNRLGHGDKE ARLVPTVVQA LVDNNFHQVA CGHSMTVALA TSGHVFTMGS
0501: SSNGQLGNPK ADGKLPCQVQ DKLNSELVEE ISCGSNHVAV LTSRSEVYTW GMGANGRLGH GGIEDKKKPT IVDALKDRHV KSIACGSNFT TCICIHKWVS
0601: GADQSVCSGC RQPFGFTRKR HNCYNCGLVH CHACSSRKVL KAALAPTPGK PHRVCDSCFM KLKAADSGGT SSPFNNKKSV MTRRSVDIKD KSERPDIRPS
0701: RLATAATAEP VKYADAKSVR SDIKPDPVSN ARAPQGPATA LAVPTTFVKP MGMGGMGGMG GMGGMGGMGA MGGMAMGMGM GVNMAPMGMG MPVVSQSHKK
0801: PSPAPTMSSA LSVKSDTKDI DNLKKTNETL NQDISKLQTQ VNKLKQKCEV QDEQLQKSER RAKSAASLAA EESSRRNSML DFIRFLDTEL KGLVDKVPAE
0901: FSDSIKDLQS QSEKYLTGQC SHSPEAISGH EQSRLPIGGM HEITHHGRST SMGNLDGSSL TSESPCHRFM DSNGRAPGDF APKYGTHGEV QLIEQFEPGV
1001: YVTLIQLRDG TKVFKRVRFS KRRFAEQQAE EWWRENQERV FRKYNHAPT
0101: EVEVWFSTLE TLITAYRVNF PTDSDRISFS DEVSQYQDAY DTRLDIASSI NRTYYSAGYG AAYSLNSSRA DVRSDRANML RVSTGDSSRI SISSSIPSSS
0201: SQASGPDDIE SLGDVYVWGE VWTDVLPPEG SSNFLCSKTD VLIPKPLESD VVLDVQQISC GSRHIALTTR QGEVFTWGEE LGGRLGHGTD EDISRPKLVE
0301: SLAVSNVEYI ACGEFHTCAV TASGDLYNWG DGSYNAGLLG DGIGASHWLP KRVSGPLEGL QVLSVACGSW HSALAMSSGK VFTFGDGTFG ALGHGNRDSV
0401: AYPKEVESLS GFRTMKVACG IWHSAAIVET NSQTGVNLVS RKLFTWGDGD KNRLGHGDKE ARLVPTVVQA LVDNNFHQVA CGHSMTVALA TSGHVFTMGS
0501: SSNGQLGNPK ADGKLPCQVQ DKLNSELVEE ISCGSNHVAV LTSRSEVYTW GMGANGRLGH GGIEDKKKPT IVDALKDRHV KSIACGSNFT TCICIHKWVS
0601: GADQSVCSGC RQPFGFTRKR HNCYNCGLVH CHACSSRKVL KAALAPTPGK PHRVCDSCFM KLKAADSGGT SSPFNNKKSV MTRRSVDIKD KSERPDIRPS
0701: RLATAATAEP VKYADAKSVR SDIKPDPVSN ARAPQGPATA LAVPTTFVKP MGMGGMGGMG GMGGMGGMGA MGGMAMGMGM GVNMAPMGMG MPVVSQSHKK
0801: PSPAPTMSSA LSVKSDTKDI DNLKKTNETL NQDISKLQTQ VNKLKQKCEV QDEQLQKSER RAKSAASLAA EESSRRNSML DFIRFLDTEL KGLVDKVPAE
0901: FSDSIKDLQS QSEKYLTGQC SHSPEAISGH EQSRLPIGGM HEITHHGRST SMGNLDGSSL TSESPCHRFM DSNGRAPGDF APKYGTHGEV QLIEQFEPGV
1001: YVTLIQLRDG TKVFKRVRFS KRRFAEQQAE EWWRENQERV FRKYNHAPT
0001: MADPASCYIY HERDVDQALV VLKKGTQLLK YSRKGKPKFR AFRLSPDEKT LIWFSRGEEK GLKLFEVSRI VPGQRTAVFK RFLRPEKDHL SFSLLYNNRE
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
0101: RSLDLICKDK AETEVWFAAL KFLIEKSRNR RARSEIPEIH DSDTFSVGRQ SIDFVPSNIP RGRTSIDLGY QNNSDVGYER GNMLRPSTDG FRISVSSTPS
0201: CSSGGSGPDD IESLGDVYVW GEVWTEGILP DGTASNETVK TDVLTPRPLE SNVVLDVHQI VCGVRHVALV TRQGEVFTWG EEVGGRLGHG IQVDISRPKL
0301: VEFLALTNID FVACGEYHTC VVSTSGDLFS WGDGIHNVGL LGHGSDISHW IPKRVSGPLE GLQVLSVACG TWHSALATAN GKLFTFGDGA FGVLGHGNRE
0401: SVSYPKEVQS LNGLKTVKVA CSIWHTAAIV EVMGQTATSM SSRKLFTWGD GDKNRLGHGN KETYLLPTCV SSLIDYNFHK IACGHTFTVA LTTSGHVFTM
0501: GGTAHGQLGN SISDGKLPCL VQDRLVGEFV EEIACGAHHV AVLTSRSEVF TWGKGANGRL GHGDTEDKRT PTLVEALRDR HVKSLSCGSN FTSSICIHKW
0601: VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS
0701: KVLLSANKNS VMSSSRPGFT PESSNARASQ VPSLQQLKDI AFPSSLSAIQ NAFKPVVAPT TTPPRTLVIG PSSPSPPPPP RSSSPYARRP SPPRTSGFSR
0801: SVIDSLRKTN EVMNQEMTKL HSQVKNLKQR CNNQGTEIER FQKAAKDASE LAARQSSKHK AATEALKSVA EQLKELKEKL PPEVSESEAF ESINSQAEAY
0901: LNANKVSETS PLTTSGQEQE TYQKTEEQVP SNSSITETSS SSRAPSTEAS SSRISGKESK EQFEPGVYVT YEVDMNGNKI FRRVRFSKKR FDEHQAEDWW
1001: TKNKDRLLKC YSSNSSSSSS SSNPTASDSP VAPQPPSDPS VPEQSNEKEP DSET
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.