Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69117 | Soybean | cytosol | 92.02 | 92.02 |
| CDY66504 | Canola | cytosol | 48.05 | 62.79 |
| KRH00393 | Soybean | cytosol | 61.6 | 62.11 |
| VIT_05s0049g01140.t01 | Wine grape | cytosol | 61.13 | 62.11 |
| KRH40796 | Soybean | cytosol | 42.76 | 61.47 |
| KRH08750 | Soybean | cytosol | 34.97 | 59.18 |
| Solyc03g005590.1.1 | Tomato | cytosol, plastid | 57.24 | 57.61 |
| PGSC0003DMT400034994 | Potato | cytosol | 55.19 | 57.49 |
| CDY12764 | Canola | cytosol | 55.19 | 56.77 |
| AT3G23270.2 | Thale cress | cytosol | 55.29 | 56.55 |
| CDX85076 | Canola | cytosol | 54.17 | 56.26 |
| Bra023740.1-P | Field mustard | cytosol | 54.17 | 54.78 |
| AT4G14368.1 | Thale cress | cytosol | 54.73 | 53.35 |
| Os05t0545200-00 | Rice | cytosol | 50.09 | 53.25 |
| TraesCS1A01G366800.1 | Wheat | cytosol | 51.39 | 53.07 |
| EES19890 | Sorghum | cytosol | 50.09 | 52.94 |
| Zm00001d011660_P003 | Maize | cytosol | 51.86 | 52.89 |
| CDX77534 | Canola | cytosol | 54.17 | 52.57 |
| CDY49416 | Canola | cytosol | 54.55 | 52.55 |
| TraesCS1B01G384600.1 | Wheat | cytosol | 51.11 | 52.53 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 51.21 | 52.52 |
| Os01t0700200-01 | Rice | cytosol | 50.74 | 52.39 |
| TraesCS1D01G372300.1 | Wheat | cytosol | 51.11 | 52.33 |
| EES01332 | Sorghum | cytosol | 51.11 | 52.18 |
| Zm00001d038882_P002 | Maize | cytosol | 50.28 | 51.37 |
| KRG91629 | Soybean | cytosol | 50.93 | 50.0 |
| KRH35179 | Soybean | cytosol | 51.11 | 49.2 |
| KRH30228 | Soybean | cytosol | 18.46 | 48.89 |
| KRH70333 | Soybean | cytosol | 50.46 | 48.57 |
| KRH65503 | Soybean | cytosol, mitochondrion, nucleus | 45.64 | 47.04 |
| Bra014931.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 52.88 | 44.88 |
| KRH14571 | Soybean | nucleus | 45.64 | 44.44 |
| KRG99075 | Soybean | nucleus | 45.18 | 44.03 |
| KRH73555 | Soybean | nucleus | 44.9 | 43.68 |
| KRH45937 | Soybean | nucleus | 44.62 | 43.37 |
| KRH45886 | Soybean | nucleus | 37.94 | 42.96 |
| KRH08736 | Soybean | endoplasmic reticulum | 27.74 | 42.9 |
| KRG99112 | Soybean | cytosol | 37.48 | 41.22 |
| KRH30227 | Soybean | cytosol | 16.51 | 39.47 |
| KRH30884 | Soybean | cytosol | 33.95 | 34.08 |
| KRG98005 | Soybean | cytosol | 33.67 | 33.93 |
| KRH59606 | Soybean | cytosol | 12.52 | 30.89 |
| KRH40960 | Soybean | cytosol | 9.55 | 30.47 |
| KRH53944 | Soybean | plastid | 12.71 | 28.9 |
| KRH63996 | Soybean | nucleus | 12.52 | 28.01 |
| KRH22127 | Soybean | cytosol | 12.43 | 27.63 |
| KRH27216 | Soybean | cytosol | 12.71 | 27.13 |
| KRH63955 | Soybean | mitochondrion | 10.3 | 26.62 |
| KRH46563 | Soybean | mitochondrion | 10.95 | 26.58 |
| KRH53977 | Soybean | cytosol, mitochondrion, nucleus | 7.88 | 26.56 |
| KRG97505 | Soybean | cytosol | 12.71 | 25.61 |
| KRG93861 | Soybean | nucleus | 9.37 | 25.57 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 11.13 | 25.32 |
| KRH31377 | Soybean | cytosol | 12.43 | 25.24 |
| KRH01383 | Soybean | cytosol | 10.85 | 24.68 |
| KRH59226 | Soybean | cytosol | 12.15 | 24.53 |
| KRH74759 | Soybean | nucleus | 12.15 | 23.27 |
| KRH69375 | Soybean | nucleus | 12.24 | 22.34 |
| KRH49501 | Soybean | cytosol | 3.34 | 20.81 |
Protein Annotations
| EntrezGene:100812689 | Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02006076 |
| InterPro:BRX_N | InterPro:Brevis_radix_dom | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G006300 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | UniProt:I1L7H4 | InterPro:IPR000408 | InterPro:IPR001849 | InterPro:IPR009091 | InterPro:IPR011993 |
| InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | EnsemblPlants:KRH31700 | ProteinID:KRH31700 | ProteinID:KRH31700.1 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | InterPro:PH-like_dom_sf | InterPro:PH_domain |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50003 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 |
| PANTHER:PTHR22870 | PANTHER:PTHR22870:SF87 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 |
| SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI000233C36B | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:618040..626188
Molecular Weight (calculated)
118425.0 Da
IEP (calculated)
8.071
GRAVY (calculated)
-0.489
Length
1078 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLSSYGSH ERDIEQAFIT LKKGTQLVKY SRKGKPKLCT FRISSDETKL IWISHGREKN LKLSSVSRII PGQRTAVFRR YLRPEKDYLS FSLIYKKGER
0101: SLDLICKNQA EVEVWFSSLK ALISPGERIR RGTSDLSNDS VDLIPNDRPY AGTLEFASSI ARGRFSFESV SHESTSSWSR SETNMPVRTS CGDGSRVSVS
0201: SVSHSSSVGS GLDDIESLGD VYIWGEVWAD GNSFDGLGSQ LQAFCKTDVL TPKPLESDVV LDVHQIGPGD RHIALVTRQG EVFTWGEDSG GRLGHGFEKD
0301: FGRPHLVESL AITNVTFVAC GEYHSCAVST SGDLFTWGDG THGAGLLGHG TDVSYWIPKR VSGPLEGLQV VAVACGTWHS ALATSNGKLF TFGDGRFGVL
0401: GHGNRASVAY PKEVQLLSGY KAIKVACGVW HSAAIIDVMD LSGSKASAKR LFTWGDGDQY RLGHANKETY LEPTCVAAVA EYNFHQVACG YTMTVALTAS
0501: GHVFSMGGTT YGQLGNPNSD GKVPILVRDK LVGEFVEEIS CGANHVAVLT SRSELYTWGR GANGRLGHGD TDDKKSPTLV EALKDRHVKN ISCGSTFTSC
0601: ICLHKWVSGV DQSVCSDCRQ PFGFTRKRHN CYHCGLVYCH PCSSKKASKA ALAPTPSKPH RVCDACYAKL KGSDSASDFN REISRPSSSV YGRESFHRGE
0701: VRSSRVLLPP TTEPVKYLEI RTNKPGNMHD FSSIVRAAQV PTSLQLKDVA FPISLSSAQN VYKPVIQPTP PTPATPIPMS PYARRPPSPP RSTSPGFSRS
0801: LIDNLRKKND HLNQQVSKWQ NNNQNLKQKS DMQDMKIREL QKNIEEAVSR VGEESSKLRK AKELIKSLTD KLREVTEKLP LEIPDNETLR TMHAQAEEFL
0901: HEEKDFESSS SPQSLESEQQ SAPDVPASES DSSKLQEQRM EGNDDAFGVV PSIDGENILE ESSNSSVSGP VVTSPSSGNG SKLRDTGIPV TEGEKSVIEQ
1001: FEHGVYVTLV VLPRGYKVFK RIRFSKRRFN EKQAEEWWNQ NKDKVHSKYN LPITKNATTG SSIIPPQAEE KCEALPSS
0101: SLDLICKNQA EVEVWFSSLK ALISPGERIR RGTSDLSNDS VDLIPNDRPY AGTLEFASSI ARGRFSFESV SHESTSSWSR SETNMPVRTS CGDGSRVSVS
0201: SVSHSSSVGS GLDDIESLGD VYIWGEVWAD GNSFDGLGSQ LQAFCKTDVL TPKPLESDVV LDVHQIGPGD RHIALVTRQG EVFTWGEDSG GRLGHGFEKD
0301: FGRPHLVESL AITNVTFVAC GEYHSCAVST SGDLFTWGDG THGAGLLGHG TDVSYWIPKR VSGPLEGLQV VAVACGTWHS ALATSNGKLF TFGDGRFGVL
0401: GHGNRASVAY PKEVQLLSGY KAIKVACGVW HSAAIIDVMD LSGSKASAKR LFTWGDGDQY RLGHANKETY LEPTCVAAVA EYNFHQVACG YTMTVALTAS
0501: GHVFSMGGTT YGQLGNPNSD GKVPILVRDK LVGEFVEEIS CGANHVAVLT SRSELYTWGR GANGRLGHGD TDDKKSPTLV EALKDRHVKN ISCGSTFTSC
0601: ICLHKWVSGV DQSVCSDCRQ PFGFTRKRHN CYHCGLVYCH PCSSKKASKA ALAPTPSKPH RVCDACYAKL KGSDSASDFN REISRPSSSV YGRESFHRGE
0701: VRSSRVLLPP TTEPVKYLEI RTNKPGNMHD FSSIVRAAQV PTSLQLKDVA FPISLSSAQN VYKPVIQPTP PTPATPIPMS PYARRPPSPP RSTSPGFSRS
0801: LIDNLRKKND HLNQQVSKWQ NNNQNLKQKS DMQDMKIREL QKNIEEAVSR VGEESSKLRK AKELIKSLTD KLREVTEKLP LEIPDNETLR TMHAQAEEFL
0901: HEEKDFESSS SPQSLESEQQ SAPDVPASES DSSKLQEQRM EGNDDAFGVV PSIDGENILE ESSNSSVSGP VVTSPSSGNG SKLRDTGIPV TEGEKSVIEQ
1001: FEHGVYVTLV VLPRGYKVFK RIRFSKRRFN EKQAEEWWNQ NKDKVHSKYN LPITKNATTG SSIIPPQAEE KCEALPSS
0001: MKTDGMADPS SYVNHDRDID QALVSLKKGT QLLKYSRKGR PKFRSFRLSP DETTLFWLSH GEEKGLKLAT VSRILPGQRT AVFRRYLRPE KDYLSFSLIY
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
0101: HNGDRSLDLI CKDKAETEVW FAGLKSLIRQ NRNKQAKSEI PEVSIHDSDC FSTGRPSTAS IDFAPNNTRR GRTSIDLGIQ NSPTKFGSSD VGYERGNMLR
0201: PSTDGFRISV SSTPSCSTGT SGPDDIESLG DVYVWGEVWS DGISPDGVVN STTVKIDVLI PKPLESNVVL DVHQIACGVR HIALVTRQGE VFTWEEEAGG
0301: RLGHGIQVDV CRPKLVEFLA LTNIDFVACG EYHTCAVSTS GDLFTWGDGI HNVGLLGHGS DLSHWIPKRV SGPVEGLQVL SVACGTWHSA LATANGKLFT
0401: FGDGAFGVLG HGDRESVSYP KEVKMLSGLK TLKVACGVWH TVAIVEVMNQ TGTSTSSRKL FTWGDGDKNR LGHGNKETYL LPTCVSSLID YNFNQIACGH
0501: TFTVALTTSG HVFTMGGTSH GQLGSSNSDG KLPCLVQDRL VGEFVEEISC GDHHVAVLTS RSEVFTWGKG SNGRLGHGDK DDRKTPTLVE ALRERHVKSI
0601: SCGSNFTSSI CIHKWVSGAD QSVCSGCRQA FGFTRKRHNC YNCGLVHCHA CSSKKALKAA LAPTPGKPHR VCDACYTKLK AGESGYNSNV ANRNSTTPTR
0701: SLDGTGRPDR DIRSSRILLS PKTEPVKYSE VRSSRSESSI VRASQVPALQ QLRDVAFPSS LSAIQNAFKP VASSSTSTLP SGTRSSRISS PPRSSGFSRG
0801: MIDTLKKSNG VINKEMTKLQ SQIKNLKEKC DNQGTEIQRL KKTAREASDL AVKHSSKHKA ATEVMKSVAE HLRELKEKLP PEVSRCEAFE SMNSQAEAYL
0901: NASEASESCL PTTSLGMGQR DPTPSTNTQD QNIEEKQSSN GGNMRSQEPS GTTEASSSSK GGGKELIEQF EPGVYVTYVL HKNGGKIFRR VRFSKRRFDE
1001: HQAEEWWNSK KDRLLKRYSH HASSSSPTAS DSVPTPTQPQ PPASDSVPTP TQPQPPASDS VPTPTQPQPP ASPTQPNSDQ AEDSKEVLDE S
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:F4JVE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.