CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53977	Soybean	cytosol, mitochondrion, nucleus	69.3	90.31
VIT_07s0031g02850.t01	Wine grape	mitochondrion	69.78	69.29
Solyc05g056590.2.1	Tomato	cytosol	40.77	61.82
AT5G08710.1	Thale cress	mitochondrion	64.27	61.75
CDY44785	Canola	mitochondrion	63.79	61.43
Bra028647.1-P	Field mustard	mitochondrion	64.03	61.1
CDY40735	Canola	mitochondrion	64.03	61.1
GSMUA_Achr10P...	Banana	mitochondrion	61.15	60.71
HORVU1Hr1G016430.4	Barley	cytosol	55.88	58.69
TraesCS1D01G078800.1	Wheat	mitochondrion	57.07	56.8
TraesCS1A01G076400.1	Wheat	mitochondrion	56.35	56.09
EES09892	Sorghum	mitochondrion	56.12	55.98
Os11t0545800-01	Rice	mitochondrion	55.88	54.82
Zm00001d052624_P007	Maize	plastid	51.32	46.72
KRG93861	Soybean	nucleus	23.5	24.81
KRH59606	Soybean	cytosol	25.66	24.49
KRH53944	Soybean	plastid	26.62	23.42
KRH40960	Soybean	cytosol	18.7	23.08
KRH63996	Soybean	nucleus	26.62	23.03
KRH45102	Soybean	cytosol, nucleus, peroxisome	24.46	21.52
KRH01383	Soybean	cytosol	23.98	21.1
KRH46563	Soybean	mitochondrion	21.34	20.05
KRH22127	Soybean	cytosol	22.78	19.59
KRH27216	Soybean	cytosol	23.02	19.01
KRH08750	Soybean	cytosol	29.02	19.0
KRH74759	Soybean	nucleus	23.98	17.76
KRH69375	Soybean	nucleus	24.22	17.09
KRG97505	Soybean	cytosol	21.82	17.01
KRH49501	Soybean	cytosol	6.95	16.76
KRH31377	Soybean	cytosol	21.1	16.57
KRH59226	Soybean	cytosol	21.1	16.48
KRH30228	Soybean	cytosol	15.11	15.48
KRH45886	Soybean	nucleus	28.78	12.61
KRH40796	Soybean	cytosol	22.3	12.4
KRG99112	Soybean	cytosol	28.06	11.94
KRG99075	Soybean	nucleus	31.18	11.75
KRH45937	Soybean	nucleus	30.94	11.63
KRH14571	Soybean	nucleus	30.7	11.56
KRH73555	Soybean	nucleus	30.46	11.46
KRG91629	Soybean	cytosol	29.5	11.2
KRG98005	Soybean	cytosol	28.54	11.12
KRH00393	Soybean	cytosol	28.3	11.04
KRH30884	Soybean	cytosol	28.06	10.89
KRH70333	Soybean	cytosol	29.26	10.89
KRH65503	Soybean	cytosol, mitochondrion, nucleus	27.1	10.8
KRH35179	Soybean	cytosol	28.78	10.71
KRH69117	Soybean	cytosol	27.34	10.58
KRH31700	Soybean	cytosol	26.62	10.3
KRH08736	Soybean	endoplasmic reticulum	14.63	8.75
KRH30227	Soybean	cytosol	5.76	5.32

Protein Annotations

EntrezGene:100811823	Gene3D:2.130.10.30	MapMan:35.1	EMBL:ACUP02002732	EnsemblPlantsGene:GLYMA_04G206900	InterPro:IPR000408
InterPro:IPR009091	UniProt:K7KLC5	EnsemblPlants:KRH63955	ProteinID:KRH63955	ProteinID:KRH63955.1	PFAM:PF00415
PRINTS:PR00633	PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF245	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens
SUPFAM:SSF50985	UniParc:UPI000233967A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:47955814..47969230

Molecular Weight (calculated)

44529.8 Da

IEP (calculated)

7.667

GRAVY (calculated)

-0.121

Length

417 amino acids

Sequence
(BLAST)

001: MLRRSFSKLH LSLRAPGLGF PTRSFSRDAG KRFAALWGNG DYGRLGLGNL DSQWKPVVCP AFRNKTLNAI ACGGAHTLFL TEDGCVYATG LNDFGQLGVS
101: ESKHYSVEPL CVFGEEKKVV QISAGYNHSC AITVDGELYM WGKNTSGQLG LGKRAPNIVP LPTKVEYLKG INIKMAALGS EHSVAISDGG AAFSWGIGVS
201: GRLGHGHESS VLGFFKSYSE YTPRLIKDLE GIKVKYVAAG LLNSACTDEN GCVFVFGERG IEKLRLKEMS DATKPSLISE LPSSKEVACG GYHTCVLTNS
301: GELYTWGSNE NGCLGIGSSD VIHLPEKVQG PFLKSSVSQV SCGWKHTAAI SEGRVFTWGW GGSNGTFSEV GHSSSGQLGH GSDVDYINPT RVCFGEDVKA
401: LQVSCGFNHT GAILEYA

Best Arabidopsis Sequence Match ( AT5G08710.1 )
(BLAST)

001: MLTRAIGRVR IPVSRIQGSN CTSGLLKDSK LGPIGVCCSR WVSSESGKRF AAMWGSGDYG RLGLGNLDSQ WTPAVCSALS DHSITAVACG GAHTLFLTET
101: RRVFATGLND CGQLGVSDVK SHAMDPLEVS GLDKDILHIS AGYYHSAAIT VDGELYMWGK NSSGQLGLGK KAARVVRVPT KVEALHGITI QSVALGSEHS
201: VAVTDGGEVL SWGGGGSGRL GHGHQSSLFG ILRSNSEFTP RLIKELEGIK VTNVAAGLLH SACTDENGSA FMFGEKSINK MGFGGVRNAT TPSIISEVPY
301: AEEVACGGYH TCVVTRGGEL YTWGSNENGC LGTDSTYVSH SPVRVEGPFL ESTVSQVSCG WKHTAAISDN NVFTWGWGGS HGTFSVDGHS SGGQLGHGSD
401: VDYARPAMVD LGKNVRAVHI SCGFNHTAAV LEHF

Arabidopsis Description

RUG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.