CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74759	Soybean	nucleus	86.63	90.94
CDY69131	Canola	cytosol	34.01	62.62
VIT_01s0026g01520.t01	Wine grape	cytosol	41.62	62.12
CDY46423	Canola	cytosol	39.09	60.95
Bra016304.1-P	Field mustard	cytosol	37.39	59.89
AT1G27060.1	Thale cress	cytosol	38.92	59.59
CDY16215	Canola	cytosol	38.75	59.33
Bra024664.1-P	Field mustard	cytosol	35.19	57.94
PGSC0003DMT400045467	Potato	cytosol	38.58	57.43
Solyc05g006940.2.1	Tomato	cytosol	37.9	56.85
GSMUA_Achr6P29750_001	Banana	cytosol	34.69	51.64
Os01t0777800-01	Rice	cytosol	31.47	46.38
OQU87663	Sorghum	cytosol	31.13	45.54
TraesCS3D01G312300.1	Wheat	cytosol	31.3	45.45
TraesCS3B01G347100.2	Wheat	cytosol	31.3	45.45
TraesCS3A01G319000.1	Wheat	cytosol	31.47	45.37
Zm00001d043280_P001	Maize	cytosol	31.3	45.34
HORVU3Hr1G076310.2	Barley	cytosol, mitochondrion, nucleus	32.83	42.73
CDY14709	Canola	nucleus	46.19	39.51
KRG93861	Soybean	nucleus	16.92	25.32
KRH59606	Soybean	cytosol	18.27	24.71
KRH63955	Soybean	mitochondrion	17.09	24.22
KRH53977	Soybean	cytosol, mitochondrion, nucleus	13.03	24.06
KRH53944	Soybean	plastid	19.12	23.84
KRH63996	Soybean	nucleus	19.12	23.44
KRH40960	Soybean	cytosol	12.69	22.19
KRH22127	Soybean	cytosol	17.09	20.82
KRH08750	Soybean	cytosol	22.0	20.41
KRH27216	Soybean	cytosol	17.09	20.0
KRH46563	Soybean	mitochondrion	14.89	19.82
KRH45102	Soybean	cytosol, nucleus, peroxisome	15.57	19.41
KRH30228	Soybean	cytosol	13.2	19.16
KRH01383	Soybean	cytosol	15.06	18.78
KRG97505	Soybean	cytosol	15.91	17.57
KRH31377	Soybean	cytosol	15.74	17.51
KRH59226	Soybean	cytosol	14.55	16.1
KRH49501	Soybean	cytosol	4.57	15.61
KRH45886	Soybean	nucleus	22.5	13.97
KRG99112	Soybean	cytosol	22.67	13.67
KRG99075	Soybean	nucleus	24.37	13.02
KRH45937	Soybean	nucleus	24.37	12.98
KRH73555	Soybean	nucleus	24.2	12.91
KRH14571	Soybean	nucleus	24.03	12.83
KRH69117	Soybean	cytosol	22.5	12.34
KRH31700	Soybean	cytosol	22.34	12.24
KRH70333	Soybean	cytosol	22.34	11.79
KRG91629	Soybean	cytosol	21.66	11.66
KRH35179	Soybean	cytosol	21.83	11.52
KRH40796	Soybean	cytosol	14.38	11.33
KRH00393	Soybean	cytosol	20.47	11.32
KRG98005	Soybean	cytosol	20.14	11.12
KRH30884	Soybean	cytosol	20.14	11.08
KRH65503	Soybean	cytosol, mitochondrion, nucleus	19.29	10.9
KRH08736	Soybean	endoplasmic reticulum	10.15	8.61
KRH30227	Soybean	cytosol	4.4	5.76

Protein Annotations

Gene3D:2.130.10.30	Gene3D:3.30.70.330	MapMan:35.1	UniProt:A0A0R0L1B2	EMBL:ACUP02000703	EnsemblPlantsGene:GLYMA_02G022400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000408	InterPro:IPR000504
InterPro:IPR009091	InterPro:IPR012677	EnsemblPlants:KRH69375	ProteinID:KRH69375	ProteinID:KRH69375.1	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF00415	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50102
InterPro:RBD_domain_sf	InterPro:RCC1/BLIP-II	InterPro:RRM_dom	InterPro:Reg_chr_condens	SMART:SM00360	SUPFAM:SSF50985
SUPFAM:SSF54928	UniParc:UPI0006EE090F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2042233..2048808

Molecular Weight (calculated)

64095.5 Da

IEP (calculated)

7.410

GRAVY (calculated)

-0.358

Length

591 amino acids

Sequence
(BLAST)

001: MERIRAHRHI LPHHTTVSRK RDRQPFFSRH DPRKRRRPLP ETTEEERPTK RPAPPRTVVV MGLPQDCSVL DLKSRFEIYG AISRIRIDRD AVGYITYRTK
101: DSADASIAAD LDPSFGITVN SKKVRVLWAT DPLAMWREGV GNSRDKSSMS KLVRAEVPLS KHGRGNRLSS AIGNTKRSED SSGSSVLEVP FKGREILKTV
201: MEEPNKTENE DDRDESEQRV WSWGAGTEGQ LGTKILQDEH FPQLLHQFSL SSISSLACGG AHVIALTSAG KALSWGRGNS GQLGHGEVVS NTLYPKAVTS
301: LDGYFITHVS AGWSHSGFVS DTGFVFTCGD GSFGQLGHGD NASHCSPVKV SCFVDLHVAQ VACGMRHSLV LLKDCSGNQV YGFGSGKRGQ LGVSNDRVKS
401: VNVPKVVSGF EGVEIVGTAA NGDHSAAVSV DGHVYTWGRG FKGFEDAHVP QCLNSSLNFT KVALGWNHAL AMSGEGEVYM LGGNHLGVLS DLQNIGPAKH
501: FPDLREFNLE KVPGLDGTKI TDIAAGAEHS VIVTEHGEIK TWGWGEHGQL GLGDTRDQTS PVTVSLDYDL NEAASIRVFC GSGFTFAVTM P

Best Arabidopsis Sequence Match ( AT1G27060.1 )
(BLAST)

001: MAEHGETQAD EEEEEQVWSW GAGTDGQLGT TKLQDELLPQ LLSLTSLPSI SMLACGGAHV IALTSGGKVF TWGRGSSGQL GHGDILNITL PKLVSFFDDS
101: VITQAAAGWS HSGFVSDSGC IFTCGNGSFG QLGHGDTLSL STPAKVSHFN NDSVKMVACG MRHSLVLFAG NQVCGFGSGK RGQLGFSSDR IKSVNLPCVV
201: SGLKDVEVVR ISANGDHSAA ISADGQFFSW GRGFCGGPDV HAPQSLPSPL SFREVAVGWN HALLLTVDGE VFKLGSTLNK QPEKQQLQID SSEALFEKVP
301: DFDGVKVMQI AAGAEHSAAV TENGEVKTWG WGEHGQLGLG NTNDQTSPEL VSLGSIDLRT KEIKVYCGSG FTYAVKRKQE LSPTSS

Arabidopsis Description

At1g27060 [Source:UniProtKB/TrEMBL;Acc:A2RVN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.