CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73555	Soybean	nucleus	95.94	95.85
KRG99075	Soybean	nucleus	87.9	87.97
KRH45937	Soybean	nucleus	87.53	87.38
VIT_06s0009g03550.t01	Wine grape	nucleus	86.99	86.99
Solyc11g065120.1.1	Tomato	cytosol	84.1	82.46
Solyc12g099740.1.1	Tomato	nucleus	75.7	81.76
AT5G12350.1	Thale cress	nucleus	78.86	81.21
CDX97187	Canola	nucleus	76.51	80.06
Bra008895.1-P	Field mustard	nucleus	76.69	79.79
CDX91165	Canola	nucleus	77.33	79.78
CDX69686	Canola	nucleus	77.06	79.72
CDX85690	Canola	nucleus	76.96	79.63
Bra006504.1-P	Field mustard	cytosol	79.04	79.33
AT5G19420.2	Thale cress	mitochondrion	80.67	78.4
CDX88891	Canola	cytosol, mitochondrion, nucleus	79.22	77.27
Bra023374.1-P	Field mustard	nucleus	77.33	76.98
CDX70876	Canola	cytosol	77.51	76.95
CDY13998	Canola	nucleus	77.51	76.88
CDX92532	Canola	nucleus	77.33	76.84
GSMUA_Achr5P08220_001	Banana	cytosol	76.06	76.55
Zm00001d042074_P001	Maize	cytosol	74.62	75.71
KXG34127	Sorghum	cytosol	62.6	75.16
TraesCS1A01G240600.2	Wheat	cytosol	74.44	75.11
Os05t0384800-01	Rice	cytosol	73.62	75.05
Bra002235.1-P	Field mustard	nucleus	75.52	75.04
TraesCS1D01G240700.1	Wheat	cytosol	74.07	75.02
TraesCS1B01G252700.2	Wheat	cytosol	74.16	74.98
HORVU0Hr1G028990.2	Barley	cytosol	26.38	74.11
GSMUA_Achr8P00080_001	Banana	endoplasmic reticulum	62.51	74.01
Zm00001d011851_P001	Maize	cytosol	74.35	73.61
TraesCS3B01G543500.1	Wheat	cytosol	72.27	73.46
TraesCS3D01G489600.1	Wheat	cytosol	72.09	73.28
HORVU1Hr1G056870.2	Barley	cytosol, endoplasmic reticulum, nucleus	74.16	72.98
HORVU3Hr1G107820.4	Barley	endoplasmic reticulum	71.64	72.16
Os01t0952300-00	Rice	cytosol	72.72	70.43
KRH08750	Soybean	cytosol	35.14	61.07
KRH45886	Soybean	nucleus	51.76	60.19
KRG99112	Soybean	cytosol	51.04	57.65
KRH30228	Soybean	cytosol	19.78	53.81
KRG91629	Soybean	cytosol	52.3	52.73
KRH35179	Soybean	cytosol	53.3	52.68
KRH70333	Soybean	cytosol	51.85	51.25
KRH08736	Soybean	endoplasmic reticulum	30.62	48.64
KRH69117	Soybean	cytosol	44.99	46.2
KRH31700	Soybean	cytosol	44.44	45.64
KRH00393	Soybean	cytosol	42.82	44.34
KRH30227	Soybean	cytosol	17.71	43.46
KRH40796	Soybean	cytosol	29.09	42.93
KRG98005	Soybean	cytosol	39.39	40.75
KRH30884	Soybean	cytosol	39.39	40.6
KRH59606	Soybean	cytosol	14.0	35.47
KRH65503	Soybean	cytosol, mitochondrion, nucleus	33.24	35.18
KRH53944	Soybean	plastid	13.82	32.28
KRH40960	Soybean	cytosol	9.85	32.25
KRH63996	Soybean	nucleus	13.82	31.74
KRH63955	Soybean	mitochondrion	11.56	30.7
KRH53977	Soybean	cytosol, mitochondrion, nucleus	8.67	30.0
KRH22127	Soybean	cytosol	13.01	29.69
KRH27216	Soybean	cytosol	13.28	29.11
KRH46563	Soybean	mitochondrion	11.47	28.6
KRG93861	Soybean	nucleus	10.12	28.35
KRH45102	Soybean	cytosol, nucleus, peroxisome	11.83	27.64
KRG97505	Soybean	cytosol	12.92	26.73
KRH01383	Soybean	cytosol	11.38	26.58
KRH31377	Soybean	cytosol	12.65	26.37
KRH49501	Soybean	cytosol	3.97	25.43
KRH74759	Soybean	nucleus	12.83	25.22
KRH59226	Soybean	cytosol	11.83	24.53
KRH69375	Soybean	nucleus	12.83	24.03

Protein Annotations

EntrezGene:100802464	Gene3D:2.130.10.30	Gene3D:2.30.29.30	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A0R0GIK8
EMBL:ACUP02008505	InterPro:BRX_N	InterPro:Brevis_radix_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G034200	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR000408	InterPro:IPR001849	InterPro:IPR009091	InterPro:IPR011993
InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455	EnsemblPlants:KRH14571	ProteinID:KRH14571	ProteinID:KRH14571.1
PFAM:PF00415	PFAM:PF01363	PFAM:PF08381	PFAM:PF13713	PFAM:PF16457	PFAM:PF16627
InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00633	ScanProsite:PS00626	PFscan:PS50012	PFscan:PS50178
PFscan:PS51514	PANTHER:PTHR22870	PANTHER:PTHR22870:SF301	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens	SMART:SM00064
SUPFAM:SSF50729	SUPFAM:SSF50985	SUPFAM:SSF57903	UniParc:UPI0003DED5FA	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:2494083..2501443

Molecular Weight (calculated)

120011.0 Da

IEP (calculated)

8.753

GRAVY (calculated)

-0.470

Length

1107 amino acids

Sequence
(BLAST)

0001: MEGFGRMASD LSRTGPVERD IEQAITALKK GACLLKYGRR GTPKFCPFRL SNDESVLIWF SGKEEKHLKL SHVSRIISGQ RTPIFQRYPR PEKEYQSFSL
0101: IYNDRSLDLI CKDKDEAEVW FSGLKALISR SHHRKWRTES RSDGIPSEAN SPRTYTRRSS PLNSPFGSNE SLQKDCGDHL RLHSPYESPP KNGLDKALDV
0201: VLYAVPQKGF FPPDSASASV HSVSSGGSDS MHGHMKTMGM DAFRVSLSSA VSTSSQGSGH DDGDALGDVF IWGEGTGDGV LGGGNHRVGS CLGAKMDSLF
0301: PKALESAVVL DVQNIACGGR HAALVTKQGE VFSWGEESGG RLGHGVDSDV LHPKLIEALS NTNIELVACG EYHSCAVTLS GDLYTWGNGT YNYGLLGHGN
0401: QVSHWVPKRV NGPLEGIHVS YISCGPWHTA VVTSAGQLFT FGDGTFGALG HGDRKSVSLP REVESLKGLR TVRAACGVWH TAAVVEVMVG NSSSSNCSSV
0501: DLFTWGDGDK GRLGHVDKEA KLVPTCVALA EHNVCQVACG HSLTVALTTS GRVYTMGSPV YGQLGNPQAD GKLPILVEGK LSESFVEEIA CGAYHVAVLT
0601: SRTEVYTWGK GANGRLGHGD TDDRNTPTLV EALKDKDVKS IACGTTFTAA ICLHKWVSGV DQSMCSGCRM PFNFKRKRHN CYNCGLVFCH SCSSKKSLKA
0701: SMAPNPNKPY RVCDNCLNKL RKTVETDASS HSSVSRRGSV NQGPLELIDK DDKLDSRSRN QLARFSSMES FKQVESRSSK KNKKLEFNSS RVSPVPNGGS
0801: QWGALNISKS FNPVFGSSKK FFSASVPGSR IVSRATSPIS RRPSPPRSTT PTPTLGGLAS PKIVVDDAKR TNDSLSQEVI KLRSQVENLT RKAQLQEVEL
0901: ERTAKQLKDA IAIAGEETAK CKAAKEVIKS LTAQLKDMAE RLPVGAARTV KSPTLASSFG SIPCSNDVSY ASTDRLNIQA TSPEADLTGS NYQLHSNGSS
1001: TVSSRSAGHT KQSQPDSTNR NGSRTKDSES RNETEWVEQD EPGVYITLTS LPGGIIDLKR VRFSRKRFSE KQAEQWWAEN RGRVYEQYNV CMIDKSSVGV
1101: GSEDLAH

Best Arabidopsis Sequence Match ( AT5G19420.1 )
(BLAST)

0001: MSRNGRMTPS DLSRAGPVTR DIEQAITALK KGAYLLKYGR RGKPKFCPFR LSNDESVLIW FSGKEEKHLK LSHVSRIISG QRTPIFQRYP RPEKEYQSFS
0101: LIYDERSLDL ICKDKDEAEV WFSGLKALIS RCHQRKWRTE SRSDGTPSEA NSPRTYTRRS SPLHSPFSSN ESFQKEGSNH LRLHSPYESP PKNGVDKAFS
0201: DMSLYAVPPK GFFPPGSATM SVHSLSSGGS DTLHGHMKGM GMDAFRVSLS SAISSSSHGS GHDDGDTLGD VFMWGEGIGE GVLGGGNHRV GSSLEIKMDS
0301: LLPKALESTI VLDVQNIACG GQHAVLVTKQ GESFSWGEES EGRLGHGVDS NVQHPKLIDA LNTTNIELVA CGEYHSCAVT LSGDLYTWGK GDFGILGHGN
0401: EVSHWVPKRV NFLMEGIHVS SIACGPYHTA VVTSAGQLFT FGDGTFGVLG HGDRKSVFIP REVDSLKGLR TVRAACGVWH TAAVVEVMVG SSSSSNCSSG
0501: KLFTWGDGDK SRLGHGDKEP KLVPTCVAAL VEPNFCQVAC GHSLTVALTT SGHVYTMGSP VYGQLGNPHA DGKVPTRVDG KLHKSFVEEI ACGAYHVAVL
0601: TSRTEVYTWG KGSNGRLGHG DADDRNSPTL VESLKDKQVK SIACGSNFTA AVCLHKWASG MDQSMCSGCR QPFNFKRKRH NCYNCGLVFC HSCSNKKSLK
0701: ACMAPNPNKP YRVCDRCFNK LKKAMETDPS SHSSLSRRES VNQGSDAIDR DEKLDTRSDG QLARFSLLEP MRQVDSRSKK NKKYEFNSSR VSPIPSGGSH
0801: RGSLNITKSF NPTFGSSKKF FSASVPGSRI ASRATSPISR RPSPPRSTTP TPTLSGLTTP KIVVDDTKRS NDNLSQEVVM LRSQVENLTR KAQLQEVELE
0901: RTTKQLKEAL AIASEESARC KAAKEVIKSL TAQLKDMAER LPVGSARTVK SPSLNSFGSS PDYAAPSSNT LNRPNSRETD SDSLTTVPMF SNGTSTPVFD
1001: SGSYRQQANH AAEAINRIST RSKESEPRNE NEWVEQDEPG VYITLTALAG GARDLKRVRF SRKRFSEKQA EEWWAENRGR VYEQYNVRIV VDKSSVGVGS
1101: EDLGH

Arabidopsis Description

Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K148]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.