Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042074_P001 | Maize | cytosol | 97.4 | 82.31 |
| Zm00001d011851_P001 | Maize | cytosol | 96.75 | 79.79 |
| TraesCS3B01G543500.1 | Wheat | cytosol | 86.33 | 73.09 |
| TraesCS3D01G489600.1 | Wheat | cytosol | 86.12 | 72.91 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 85.9 | 72.07 |
| Os01t0952300-00 | Rice | cytosol | 87.74 | 70.78 |
| Solyc12g099740.1.1 | Tomato | nucleus | 73.43 | 66.05 |
| GSMUA_Achr8P00080_001 | Banana | endoplasmic reticulum | 65.62 | 64.71 |
| GSMUA_Achr5P08220_001 | Banana | cytosol | 76.46 | 64.09 |
| VIT_06s0009g03550.t01 | Wine grape | nucleus | 75.81 | 63.14 |
| KRH73555 | Soybean | nucleus | 75.27 | 62.64 |
| KRH14571 | Soybean | nucleus | 75.16 | 62.6 |
| VIT_13s0067g03380.t01 | Wine grape | endoplasmic reticulum, extracellular | 73.75 | 61.93 |
| Solyc11g065120.1.1 | Tomato | cytosol | 75.38 | 61.56 |
| KRG99075 | Soybean | nucleus | 73.54 | 61.3 |
| AT5G12350.1 | Thale cress | nucleus | 71.26 | 61.12 |
| KRH45937 | Soybean | nucleus | 73.43 | 61.05 |
| CDX85690 | Canola | nucleus | 70.28 | 60.56 |
| CDX91165 | Canola | nucleus | 69.63 | 59.83 |
| Bra008895.1-P | Field mustard | nucleus | 68.87 | 59.68 |
| CDX69686 | Canola | nucleus | 69.2 | 59.63 |
| Bra006504.1-P | Field mustard | cytosol | 71.04 | 59.38 |
| CDX97187 | Canola | nucleus | 67.68 | 58.98 |
| Bra002235.1-P | Field mustard | nucleus | 70.5 | 58.35 |
| CDX92532 | Canola | nucleus | 70.17 | 58.08 |
| Bra023374.1-P | Field mustard | nucleus | 69.85 | 57.91 |
| CDX88891 | Canola | cytosol, mitochondrion, nucleus | 71.26 | 57.89 |
| CDY13998 | Canola | nucleus | 69.96 | 57.8 |
| AT5G19420.2 | Thale cress | mitochondrion | 71.37 | 57.77 |
| CDX70876 | Canola | cytosol | 69.52 | 57.49 |
| KXG34192 | Sorghum | cytosol | 47.94 | 48.46 |
| EES18851 | Sorghum | cytosol, plastid | 46.85 | 47.16 |
| EES13137 | Sorghum | cytosol | 44.9 | 38.91 |
| EES19890 | Sorghum | cytosol | 42.3 | 38.24 |
| EES01332 | Sorghum | cytosol | 43.17 | 37.69 |
| EES10837 | Sorghum | cytosol | 16.38 | 34.09 |
| EER97183 | Sorghum | mitochondrion | 13.99 | 29.86 |
| EES09892 | Sorghum | mitochondrion | 13.12 | 28.95 |
| KXG26989 | Sorghum | cytosol | 33.19 | 28.68 |
| OQU85620 | Sorghum | cytosol, mitochondrion, nucleus | 32.65 | 28.05 |
| OQU87663 | Sorghum | cytosol | 11.71 | 26.73 |
| KXG25196 | Sorghum | cytosol | 11.17 | 26.34 |
| OQU91404 | Sorghum | cytosol | 13.34 | 25.41 |
| KXG35074 | Sorghum | cytosol | 13.23 | 25.26 |
| EES07101 | Sorghum | cytosol, plastid | 11.61 | 20.0 |
| EES12399 | Sorghum | cytosol, plastid | 10.85 | 18.9 |
| KXG26580 | Sorghum | cytosol | 10.85 | 18.62 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1B6Q895 | InterPro:BRX_N | InterPro:Brevis_radix_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 |
| InterPro:IPR013083 | InterPro:IPR013591 | InterPro:IPR017455 | EnsemblPlants:KXG34127 | ProteinID:KXG34127 | ProteinID:KXG34127.1 |
| PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | PFAM:PF16627 | PRINTS:PR00633 |
| ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF212 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | EnsemblPlantsGene:SORBI_3003G428100 | SUPFAM:SSF50985 | SUPFAM:SSF57903 |
| UniParc:UPI00081ACC7F | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:73146726..73152308
Molecular Weight (calculated)
98706.0 Da
IEP (calculated)
8.303
GRAVY (calculated)
-0.412
Length
922 amino acids
Sequence
(BLAST)
(BLAST)
001: MHKDGSDNYR LRTPYGSPPK NGLEKAFSDA MLYAVPPRGF FPSDSNAGSV HSMSSGHSDN TNGHPRGVPM DAFRVSYSSA VSSSSHGSGH DDGDALGDVF
101: IWGEGTGEGI LGGGGSRVGS SSGAKMDCLV PKPLEFAVRL DVQNISCGGR HAALVTKQGE IYSWGEESGG RLGHGVDCDV SQPKLIDALS HMNIELVACG
201: EYHTCAVTLS GDLYTWGDGT FKFGLLGHGN DVSHWVPKHV NGPLEGIHVS SISCGPWHTA LVTSAGQLFT FGDGSFGVLG HGDRESISVP REVESLKGLR
301: TVRAACGVWH TAAVVEVMAG NSSSSNCSSG KIFTWGDGDK GRLGHGDKEA KLVPTCVAAL VEPNFCQVAC GHCLTVALTT SGHVYTMGSA VYGQLGNTQA
401: DGMLPVRVEG KLHKNFVEEI SCGAYHVAVL TSRTEVYTWG KGANGRLGHG DTDDKNTPTL VEALKDKQVR SVVCGINFTA AICIHKWVSG VDQSMCSGCR
501: QPFNLRRKRH NCYNCALVFC HSCSSKKSLK ASLAPNTNKP YRVCDTCYSK LTKGPETDMH SSAKRAATVP GFSDTIEEDL ETRSNAQLSR LSSMESFKHL
601: DSRYSKKNKK FEFNSTRVSP VPNGSSHWSG LNISRSFNPV FGSSKKFFSA SVPGSRIVSR ATSPISRRAS PPRSTTPTPT LGGLTSPRVV PNDGKPTNDA
701: LSQEVLNLRS QVESLTRKSQ LLEVELERTT KQLKEAISIA GEETAKCKAA KEVIKSLTAQ LKGMAERLPG GAAKNTKLPP LPGISIPSDI SSMATESVVS
801: PSSSGEQIIN GHNGLLASNG PSSVRNKTSH PEVGKNGSRP PDAESCHDAE WVEQDEPGVY ITLTALPGGA RDLKRVRFSR KRFSETQAEQ WWQENRARVY
901: QQYNVRVVDK STASVDNDIV AN
101: IWGEGTGEGI LGGGGSRVGS SSGAKMDCLV PKPLEFAVRL DVQNISCGGR HAALVTKQGE IYSWGEESGG RLGHGVDCDV SQPKLIDALS HMNIELVACG
201: EYHTCAVTLS GDLYTWGDGT FKFGLLGHGN DVSHWVPKHV NGPLEGIHVS SISCGPWHTA LVTSAGQLFT FGDGSFGVLG HGDRESISVP REVESLKGLR
301: TVRAACGVWH TAAVVEVMAG NSSSSNCSSG KIFTWGDGDK GRLGHGDKEA KLVPTCVAAL VEPNFCQVAC GHCLTVALTT SGHVYTMGSA VYGQLGNTQA
401: DGMLPVRVEG KLHKNFVEEI SCGAYHVAVL TSRTEVYTWG KGANGRLGHG DTDDKNTPTL VEALKDKQVR SVVCGINFTA AICIHKWVSG VDQSMCSGCR
501: QPFNLRRKRH NCYNCALVFC HSCSSKKSLK ASLAPNTNKP YRVCDTCYSK LTKGPETDMH SSAKRAATVP GFSDTIEEDL ETRSNAQLSR LSSMESFKHL
601: DSRYSKKNKK FEFNSTRVSP VPNGSSHWSG LNISRSFNPV FGSSKKFFSA SVPGSRIVSR ATSPISRRAS PPRSTTPTPT LGGLTSPRVV PNDGKPTNDA
701: LSQEVLNLRS QVESLTRKSQ LLEVELERTT KQLKEAISIA GEETAKCKAA KEVIKSLTAQ LKGMAERLPG GAAKNTKLPP LPGISIPSDI SSMATESVVS
801: PSSSGEQIIN GHNGLLASNG PSSVRNKTSH PEVGKNGSRP PDAESCHDAE WVEQDEPGVY ITLTALPGGA RDLKRVRFSR KRFSETQAEQ WWQENRARVY
901: QQYNVRVVDK STASVDNDIV AN
0001: MSRNGRMTPS DLSRAGPVTR DIEQAITALK KGAYLLKYGR RGKPKFCPFR LSNDESVLIW FSGKEEKHLK LSHVSRIISG QRTPIFQRYP RPEKEYQSFS
0101: LIYDERSLDL ICKDKDEAEV WFSGLKALIS RCHQRKWRTE SRSDGTPSEA NSPRTYTRRS SPLHSPFSSN ESFQKEGSNH LRLHSPYESP PKNGVDKAFS
0201: DMSLYAVPPK GFFPPGSATM SVHSLSSGGS DTLHGHMKGM GMDAFRVSLS SAISSSSHGS GHDDGDTLGD VFMWGEGIGE GVLGGGNHRV GSSLEIKMDS
0301: LLPKALESTI VLDVQNIACG GQHAVLVTKQ GESFSWGEES EGRLGHGVDS NVQHPKLIDA LNTTNIELVA CGEYHSCAVT LSGDLYTWGK GDFGILGHGN
0401: EVSHWVPKRV NFLMEGIHVS SIACGPYHTA VVTSAGQLFT FGDGTFGVLG HGDRKSVFIP REVDSLKGLR TVRAACGVWH TAAVVEVMVG SSSSSNCSSG
0501: KLFTWGDGDK SRLGHGDKEP KLVPTCVAAL VEPNFCQVAC GHSLTVALTT SGHVYTMGSP VYGQLGNPHA DGKVPTRVDG KLHKSFVEEI ACGAYHVAVL
0601: TSRTEVYTWG KGSNGRLGHG DADDRNSPTL VESLKDKQVK SIACGSNFTA AVCLHKWASG MDQSMCSGCR QPFNFKRKRH NCYNCGLVFC HSCSNKKSLK
0701: ACMAPNPNKP YRVCDRCFNK LKKAMETDPS SHSSLSRRES VNQGSDAIDR DEKLDTRSDG QLARFSLLEP MRQVDSRSKK NKKYEFNSSR VSPIPSGGSH
0801: RGSLNITKSF NPTFGSSKKF FSASVPGSRI ASRATSPISR RPSPPRSTTP TPTLSGLTTP KIVVDDTKRS NDNLSQEVVM LRSQVENLTR KAQLQEVELE
0901: RTTKQLKEAL AIASEESARC KAAKEVIKSL TAQLKDMAER LPVGSARTVK SPSLNSFGSS PDYAAPSSNT LNRPNSRETD SDSLTTVPMF SNGTSTPVFD
1001: SGSYRQQANH AAEAINRIST RSKESEPRNE NEWVEQDEPG VYITLTALAG GARDLKRVRF SRKRFSEKQA EEWWAENRGR VYEQYNVRIV VDKSSVGVGS
1101: EDLGH
0101: LIYDERSLDL ICKDKDEAEV WFSGLKALIS RCHQRKWRTE SRSDGTPSEA NSPRTYTRRS SPLHSPFSSN ESFQKEGSNH LRLHSPYESP PKNGVDKAFS
0201: DMSLYAVPPK GFFPPGSATM SVHSLSSGGS DTLHGHMKGM GMDAFRVSLS SAISSSSHGS GHDDGDTLGD VFMWGEGIGE GVLGGGNHRV GSSLEIKMDS
0301: LLPKALESTI VLDVQNIACG GQHAVLVTKQ GESFSWGEES EGRLGHGVDS NVQHPKLIDA LNTTNIELVA CGEYHSCAVT LSGDLYTWGK GDFGILGHGN
0401: EVSHWVPKRV NFLMEGIHVS SIACGPYHTA VVTSAGQLFT FGDGTFGVLG HGDRKSVFIP REVDSLKGLR TVRAACGVWH TAAVVEVMVG SSSSSNCSSG
0501: KLFTWGDGDK SRLGHGDKEP KLVPTCVAAL VEPNFCQVAC GHSLTVALTT SGHVYTMGSP VYGQLGNPHA DGKVPTRVDG KLHKSFVEEI ACGAYHVAVL
0601: TSRTEVYTWG KGSNGRLGHG DADDRNSPTL VESLKDKQVK SIACGSNFTA AVCLHKWASG MDQSMCSGCR QPFNFKRKRH NCYNCGLVFC HSCSNKKSLK
0701: ACMAPNPNKP YRVCDRCFNK LKKAMETDPS SHSSLSRRES VNQGSDAIDR DEKLDTRSDG QLARFSLLEP MRQVDSRSKK NKKYEFNSSR VSPIPSGGSH
0801: RGSLNITKSF NPTFGSSKKF FSASVPGSRI ASRATSPISR RPSPPRSTTP TPTLSGLTTP KIVVDDTKRS NDNLSQEVVM LRSQVENLTR KAQLQEVELE
0901: RTTKQLKEAL AIASEESARC KAAKEVIKSL TAQLKDMAER LPVGSARTVK SPSLNSFGSS PDYAAPSSNT LNRPNSRETD SDSLTTVPMF SNGTSTPVFD
1001: SGSYRQQANH AAEAINRIST RSKESEPRNE NEWVEQDEPG VYITLTALAG GARDLKRVRF SRKRFSEKQA EEWWAENRGR VYEQYNVRIV VDKSSVGVGS
1101: EDLGH
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K148]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.