CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG31183

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63860.1	KXG31183	AT2G32950.1	19165148

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003632_P003	Maize	extracellular	97.29	97.29
Os04t0435700-01	Rice	plasma membrane	91.65	89.62
HORVU2Hr1G076180.1	Barley	cytosol, endoplasmic reticulum	86.46	86.85
TraesCS2B01G323100.1	Wheat	unclear	86.23	86.43
TraesCS2D01G304900.2	Wheat	cytosol	86.0	86.0
TraesCS2A01G306400.3	Wheat	cytosol	86.0	86.0
GSMUA_Achr3P19000_001	Banana	nucleus	79.01	77.95
GSMUA_Achr6P17690_001	Banana	cytosol	77.2	77.9
VIT_07s0031g02560.t01	Wine grape	cytosol	75.17	74.83
Solyc05g018620.2.1	Tomato	cytosol	51.69	74.59
CDY31347	Canola	cytosol	72.69	73.85
Bra029198.1-P	Field mustard	cytosol	68.62	73.79
AT5G63860.1	Thale cress	cytosol	72.91	73.41
CDY43762	Canola	cytosol	70.88	73.36
Bra024242.1-P	Field mustard	cytosol	67.95	73.24
Bra037755.1-P	Field mustard	cytosol	68.62	73.08
CDX81201	Canola	cytosol	72.23	72.73
CDY60046	Canola	cytosol	72.91	72.1
CDY39843	Canola	cytosol	65.46	71.78
CDX84451	Canola	cytosol	71.56	71.08
KRH59606	Soybean	cytosol	67.04	67.96
KRH53944	Soybean	plastid	69.75	65.19
KRH63996	Soybean	nucleus	69.53	63.9
KRH40960	Soybean	cytosol	46.28	60.65
KXG25196	Sorghum	cytosol	24.38	27.62
EES09892	Sorghum	mitochondrion	23.25	24.64
KXG35074	Sorghum	cytosol	26.64	24.43
EER97183	Sorghum	mitochondrion	23.7	24.31
OQU87663	Sorghum	cytosol	20.99	23.02
OQU91404	Sorghum	cytosol	24.38	22.31
EES07101	Sorghum	cytosol, plastid	22.57	18.69
KXG26580	Sorghum	cytosol	21.9	18.06
EES12399	Sorghum	cytosol, plastid	21.44	17.96
KXG34127	Sorghum	cytosol	34.09	16.38
KXG34192	Sorghum	cytosol	32.96	16.01
EES18851	Sorghum	cytosol, plastid	31.15	15.07
EES19890	Sorghum	cytosol	31.6	13.73
EES13137	Sorghum	cytosol	32.73	13.63
EES01332	Sorghum	cytosol	29.8	12.5
KXG26989	Sorghum	cytosol	29.8	12.37
OQU85620	Sorghum	cytosol, mitochondrion, nucleus	29.8	12.3

Protein Annotations

Gene3D:2.130.10.30	MapMan:26.1.3.1	EntrezGene:8075829	UniProt:C5Y8Q8	EnsemblPlants:EES10837	ProteinID:EES10837
ProteinID:EES10837.1	GO:GO:0000785	GO:GO:0003674	GO:GO:0003682	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009411	GO:GO:0009605
GO:GO:0009628	GO:GO:0009649	GO:GO:0009881	GO:GO:0009987	GO:GO:0010224	GO:GO:0038023
GO:GO:0042802	GO:GO:0042803	InterPro:IPR000408	InterPro:IPR009091	PFAM:PF00415	PRINTS:PR00633
ScanProsite:PS00626	PFscan:PS50012	PANTHER:PTHR22870	PANTHER:PTHR22870:SF317	InterPro:RCC1/BLIP-II	InterPro:Reg_chr_condens
EnsemblPlantsGene:SORBI_3006G085300	SUPFAM:SSF50985	unigene:Sbi.11105	UniParc:UPI0001A86CDA	InterPro:UVR8	RefSeq:XP_002446509.1

Description

hypothetical protein

Coordinates

chr6:+:45499992..45505973

Molecular Weight (calculated)

47263.2 Da

IEP (calculated)

5.387

GRAVY (calculated)

-0.332

Length

443 amino acids

Sequence
(BLAST)

001: MDSVMAAVPD SPPQTVVLVS AGASHSVALL TGNVLCSWGR GEDGQLGHGD AEDRLVPTVL SGFDAPGITS VICGADHTTA YSEDELQVYS WGWGDFGRLG
101: HGNSSDVFTP QPVKALQGLK IKQIACGDSH CLAVTMAGQV QSWGRNQNGQ LGLGTTEDSL LPQKIQAFEG VCVKMIAAGA EHTAAVTEDG DLYGWGWGRY
201: GNLGLGDRND RLLPEKVSSV EGEKMVLVAC GWRHTITVSD SGNLYTYGWS KYGQLGHGDF EDHLVPHKLE ALKDSTISQI SGGWRHTMAL TSEGKLYGWG
301: WNKFGQVGVG NNDDHCSPVQ VHFPEDQKIS QVACGWRHTL ALSEKKNVFS WGRGTSGQLG NGEIVDRNTP VLIDALSTDG SGCKKLESST AAPFAAKVWV
401: SPSERYAIVP DENVPKAGEG TARGNGADAN VPENDVKRMR VQS

Best Arabidopsis Sequence Match ( AT5G63860.1 )
(BLAST)

001: MAEDMAADEV TAPPRKVLII SAGASHSVAL LSGDIVCSWG RGEDGQLGHG DAEDRPSPTQ LSALDGHQIV SVTCGADHTV AYSQSGMEVY SWGWGDFGRL
101: GHGNSSDLFT PLPIKALHGI RIKQIACGDS HCLAVTMEGE VQSWGRNQNG QLGLGDTEDS LVPQKIQAFE GIRIKMVAAG AEHTAAVTED GDLYGWGWGR
201: YGNLGLGDRT DRLVPERVTS TGGEKMSMVA CGWRHTISVS YSGALYTYGW SKYGQLGHGD LEDHLIPHKL EALSNSFISQ ISGGWRHTMA LTSDGKLYGW
301: GWNKFGQVGV GNNLDQCSPV QVRFPDDQKV VQVSCGWRHT LAVTERNNVF AWGRGTNGQL GIGESVDRNF PKIIEALSVD GASGQHIESS NIDPSSGKSW
401: VSPAERYAVV PDETGLTDGS SKGNGGDISV PQTDVKRVRI

Arabidopsis Description

UVR8Ultraviolet-B receptor UVR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.