CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032229_P002	Maize	mitochondrion	91.82	85.68
TraesCS7D01G282600.1	Wheat	cytosol	82.35	85.41
TraesCS7B01G200200.1	Wheat	cytosol	84.91	85.35
TraesCS7A01G284800.1	Wheat	cytosol	84.65	82.96
GSMUA_Achr9P15560_001	Banana	cytosol	76.98	80.91
HORVU7Hr1G062090.6	Barley	cytosol	84.4	79.71
VIT_14s0006g03240.t01	Wine grape	cytosol	78.77	77.97
KRG93861	Soybean	nucleus	78.52	77.72
Bra008654.1-P	Field mustard	cytosol	78.77	77.58
Solyc02g085780.2.1	Tomato	cytosol	77.24	77.44
CDX69479	Canola	cytosol	78.26	77.08
PGSC0003DMT400032945	Potato	extracellular	76.73	76.73
CDY26488	Canola	cytosol	78.01	76.63
AT5G16040.1	Thale cress	cytosol	76.98	76.01
AT3G02510.1	Thale cress	cytosol	75.7	75.32
CDY34733	Canola	cytosol	63.94	74.63
Bra021435.1-P	Field mustard	cytosol	74.68	74.49
OQU87663	Sorghum	cytosol	25.58	24.75
EES09892	Sorghum	mitochondrion	26.09	24.4
EES10837	Sorghum	cytosol	27.62	24.38
EER97183	Sorghum	mitochondrion	23.53	21.3
KXG35074	Sorghum	cytosol	24.55	19.88
OQU91404	Sorghum	cytosol	23.02	18.59
EES07101	Sorghum	cytosol, plastid	24.3	17.76
EES12399	Sorghum	cytosol, plastid	23.79	17.58
KXG26580	Sorghum	cytosol	22.51	16.39
EES18851	Sorghum	cytosol, plastid	28.13	12.01
KXG34192	Sorghum	cytosol	27.88	11.95
KXG34127	Sorghum	cytosol	26.34	11.17
EES19890	Sorghum	cytosol	27.88	10.69
EES13137	Sorghum	cytosol	27.11	9.96
EES01332	Sorghum	cytosol	25.83	9.56
OQU85620	Sorghum	cytosol, mitochondrion, nucleus	24.81	9.04
KXG26989	Sorghum	cytosol	23.79	8.72
Os02t0684900-01	Rice	cytosol	0.26	0.23
Os09t0560500-01	Rice	mitochondrion, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:KXG25196	EnsemblPlantsGene:SORBI_3007G134400	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF206	PFAM:PF00415	PFscan:PS50012	PRINTS:PR00633
ProteinID:KXG25196	ProteinID:KXG25196.1	ScanProsite:PS00626	SUPFAM:SSF50985	UniParc:UPI000220715D	UniProt:A0A1B6PHM8
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:55942492..55947163

Molecular Weight (calculated)

41901.2 Da

IEP (calculated)

6.374

GRAVY (calculated)

-0.416

Length

391 amino acids

Sequence
(BLAST)

001: MAAPPRATAV LAWGSGEDGQ LGMGGNEEKD WAHCVEALAP YAVTAVVAGS RNSLAICDDG RLFTWGWNQR GTLGHPPETK TESSPGPVND LAGVKIVQAA
101: IGGWHCLAVD DKGRAYAWGG NEYGQCGEEP QRTEDGTRAL WRDIPTPRRC APKLKVRQVA AGGTHSVVLT QEGHVWSWGQ PWPPGDIKQI SKPVRVQGLE
201: KVRVIAVGAF HNLALTEDGI LWAWGSNEYG QLGTGDTQPR SQPIRVEGLS DLSLVDIAAG GWHSTALTIE GEVYAWGRGE HGRLGFGDDK SSRMVPLKVE
301: LLAGENIVQV SCGGTHSVAL TQDGRMFSYG RGDHGRLGYG RKVTTGHPME VPIDLPPPKS SSNPDGQWQA KYVACGGRHT LAIAEWTEPT D

Best Arabidopsis Sequence Match ( AT5G16040.1 )
(BLAST)

001: MASATSVIAW GSGEDGQLGL GTDEEKELAS VVDALEPFNV RSVVGGSRNS LAICDDGKLF TWGWNQRGTL GHPPETKTES TPSLVKSLAN VKIVQAAIGG
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPSKD ETGRPVRRDI VIPKRCAQQL TVRQVAAGGT HSVVLTREGY VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LKEDGTLWAW GNNEYGQLGT GDTQPRSYPI PVQGLDDLTL VDIAAGGWHS TALTNEGEVY GWGRGEHGRL GFGDNDKSSK MLPQKVNLLA
301: GEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI HIPPPEGRFN HTDEEDDGKW IAKHVACGGR HTLAIVEWKY DQEETE

Arabidopsis Description

At5g16040 [Source:UniProtKB/TrEMBL;Acc:Q9LFS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.