Factsheet for TraesCS7B01G200200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G282600.1	Wheat	cytosol	95.89	98.94
TraesCS7A01G284800.1	Wheat	cytosol	98.97	96.49
HORVU7Hr1G062090.6	Barley	cytosol	97.69	91.79
Zm00001d050380_P004	Maize	cytosol	86.89	86.89
KXG25196	Sorghum	cytosol	85.35	84.91
GSMUA_Achr9P15560_001	Banana	cytosol	76.86	80.38
Zm00001d032229_P002	Maize	mitochondrion	85.35	79.24
PGSC0003DMT400032945	Potato	extracellular	77.64	77.24
Solyc02g085780.2.1	Tomato	cytosol	77.38	77.18
VIT_14s0006g03240.t01	Wine grape	cytosol	78.15	76.96
KRG93861	Soybean	nucleus	77.89	76.71
CDY34733	Canola	cytosol	64.01	74.33
Bra008654.1-P	Field mustard	cytosol	75.84	74.31
CDX69479	Canola	cytosol	75.32	73.8
AT5G16040.1	Thale cress	cytosol	74.81	73.48
CDY26488	Canola	cytosol	75.06	73.37
AT3G02510.1	Thale cress	cytosol	73.52	72.77
Bra021435.1-P	Field mustard	cytosol	72.75	72.19
TraesCS6B01G180900.1	Wheat	cytosol	25.19	24.2
TraesCS3B01G347100.2	Wheat	cytosol	25.19	24.08
TraesCS2B01G323100.1	Wheat	unclear	26.22	23.08
TraesCS5B01G366300.1	Wheat	mitochondrion	23.65	21.0
TraesCS2B01G254900.2	Wheat	cytosol	24.16	19.42
TraesCS5B01G170800.1	Wheat	cytosol	23.91	19.38
TraesCS2B01G360200.1	Wheat	cytosol	24.16	17.28
TraesCS1B01G024400.1	Wheat	cytosol, mitochondrion, nucleus	28.28	12.13
TraesCS3B01G581600.2	Wheat	cytosol	26.99	11.51
TraesCS7B01G090600.1	Wheat	cytosol	28.53	10.88
TraesCS1B01G252700.2	Wheat	cytosol	29.31	10.41
TraesCS1B01G384600.1	Wheat	cytosol	28.02	10.39
TraesCS3B01G543500.1	Wheat	cytosol	28.79	10.28
TraesCS2B01G609200.1	Wheat	cytosol	26.74	9.72
TraesCS2B01G478900.1	Wheat	cytosol, nucleus, peroxisome	25.45	9.6
TraesCS6B01G288400.1	Wheat	cytosol	23.91	8.72
Os09t0560500-01	Rice	mitochondrion, plastid	0.0	0.0
Os02t0684900-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7B01G200200.1	EnsemblPlantsGene:TraesCS7B01G200200	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF206	PFAM:PF00415	PFscan:PS50012	PRINTS:PR00633
ScanProsite:PS00626	SEG:seg	SUPFAM:SSF50985	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7B:+:363215591..363238634

Molecular Weight (calculated)

41589.3 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.276

Length

389 amino acids

Sequence
(BLAST)

001: MAPPSRPVAV LAWGSGEDGQ LGMGRCDEKD WARCIGALDA YAVSAVVAGS RNSLAICNDG SLFTWGWNQR GTLGHPPETK TESSPAHVDA LIGVKIVQAA
101: IGGWHCLAVD DKGRAYAWGG NEYGQCGEEP ERKEDGTRAL RRDIPIPQRC ALKLKVRQVA AGGTHSVVLT QEGHVWTWGQ PWPPGDIKKI STPVRVQGLE
201: QVSMIAVGAF HNLALSVDGI LWAWGNNEYG QLGIGDTQPR SQPIRVEGLS NLSLVDIAAG GWHSAALTKE GEVYAWGRGE HGRLGFGDDK SSHMVPLKVQ
301: LLAGEDIVQV SCGGTHSVVL TSDGRMFSYG RGDHGRLGDG RKVTTGHPME VPINLPPPKT STSSEGLWQA NYVACGGRHT LAIVTWTDM

Best Arabidopsis Sequence Match ( AT5G16040.1 )
(BLAST)

001: MASATSVIAW GSGEDGQLGL GTDEEKELAS VVDALEPFNV RSVVGGSRNS LAICDDGKLF TWGWNQRGTL GHPPETKTES TPSLVKSLAN VKIVQAAIGG
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPSKD ETGRPVRRDI VIPKRCAQQL TVRQVAAGGT HSVVLTREGY VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LKEDGTLWAW GNNEYGQLGT GDTQPRSYPI PVQGLDDLTL VDIAAGGWHS TALTNEGEVY GWGRGEHGRL GFGDNDKSSK MLPQKVNLLA
301: GEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI HIPPPEGRFN HTDEEDDGKW IAKHVACGGR HTLAIVEWKY DQEETE

Arabidopsis Description

At5g16040 [Source:UniProtKB/TrEMBL;Acc:Q9LFS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.