Factsheet for Os02t0684900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0583700-00	Rice	cytosol	44.55	18.57
Os08t0430600-01	Rice	plastid	4.64	12.58
Os05t0106700-00	Rice	mitochondrion	23.9	10.96
Os04t0686200-01	Rice	plasma membrane	24.59	10.03
Os01t0700200-01	Rice	cytosol	23.2	9.58
Os05t0545200-00	Rice	cytosol	22.27	9.47
Os05t0384800-01	Rice	cytosol	22.97	9.12
Os01t0952300-00	Rice	cytosol	21.11	7.96
Os01t0964800-01	Rice	mitochondrion	8.35	6.22
Os09t0560500-01	Rice	mitochondrion, plastid	2.78	5.77
Os04t0435700-01	Rice	plasma membrane	2.55	2.43
Os02t0554100-01	Rice	cytosol, plasma membrane	2.55	2.43
Os04t0226400-01	Rice	plastid	1.16	2.3
Os09t0560450-01	Rice	mitochondrion	1.62	1.6
VIT_14s0006g03240.t01	Wine grape	cytosol	0.7	0.76
Os11t0545800-01	Rice	mitochondrion	0.7	0.71
Solyc02g085780.2.1	Tomato	cytosol	0.46	0.51
PGSC0003DMT400032945	Potato	extracellular	0.46	0.51
KRG93861	Soybean	nucleus	0.46	0.51
CDX69479	Canola	cytosol	0.46	0.5
Bra008654.1-P	Field mustard	cytosol	0.46	0.5
CDY26488	Canola	cytosol	0.46	0.5
CDY34733	Canola	cytosol	0.23	0.3
Zm00001d050380_P004	Maize	cytosol	0.23	0.26
KXG25196	Sorghum	cytosol	0.23	0.26
Bra021435.1-P	Field mustard	cytosol	0.23	0.26
AT3G02510.1	Thale cress	cytosol	0.23	0.25
AT5G16040.1	Thale cress	cytosol	0.23	0.25
Zm00001d032229_P002	Maize	mitochondrion	0.23	0.24
Os12t0284000-01	Rice	cytosol	0.23	0.19
Os03t0599600-01	Rice	mitochondrion	0.0	0.0
Os02t0597000-01	Rice	cytosol	0.0	0.0
Os08t0430700-02	Rice	cytosol	0.0	0.0
Os01t0777800-01	Rice	cytosol	0.0	0.0
HORVU7Hr1G062090.6	Barley	cytosol	0.0	0.0
GSMUA_Achr9P15560_001	Banana	cytosol	0.0	0.0
TraesCS7A01G284800.1	Wheat	cytosol	0.0	0.0
TraesCS7B01G200200.1	Wheat	cytosol	0.0	0.0
TraesCS7D01G282600.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	ProteinID:BAF09678.1	ProteinID:BAS80327.1	InterPro:Brevis_radix_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR013591	InterPro:IPR017455
EnsemblPlantsGene:Os02g0684900	EnsemblPlants:Os02t0684900-01	PFAM:PF01363	PFAM:PF08381	PFscan:PS50178	PFscan:PS51514
PANTHER:PTHR22870	PANTHER:PTHR22870:SF311	UniProt:Q0DYL0	SMART:SM00064	SUPFAM:SSF57903	UniParc:UPI0000DF080A
InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

Similar to Chromosome condensation regulator protein (Fragment). (Os02t0684900-01)

Coordinates

chr2:+:28018649..28020515

Molecular Weight (calculated)

48764.1 Da

IEP (calculated)

9.337

GRAVY (calculated)

-0.705

Length

431 amino acids

Sequence
(BLAST)

001: HRPLSSKDQS VCSNCQLTFG FTRKKHNCYN CGSMFCNSCS NNKVSRAALA PDRSKRYRVC DACFSQMQKV EEHRKLDPQQ KIQKDEVCPI EIRSYTPKLA
101: RIFKEANAIM EKMASAQSPH QRSQNLAVPD HVRTLRWGLV ECPSQFRCVR ESIPYCSTLN KQTVSGSIVR VMNETMAPKP ASSLLKSAND SKAELDLMEN
201: ILLEEVKQLQ EQVTTLAKQC RQRSLKVQLY KRKVEETWLI AKDEAAKCKA AKDIIKVLID QHDFLSKNLL AGEKLDNSRI MPSHIASAKS LKAELPDPPD
301: KNVFTSEFQQ SKSNRDHHNS RQVDRECTQP SIASMANYSV THQNCRRTSN GSTRCTEGTD ATTAPTDSNG VIEQIERGVY ATVVTSPGGK KCIKRIRFSR
401: KHFGEDQAQK WWEANESMIF GKYSSMEQTV G

Best Arabidopsis Sequence Match ( AT1G65920.1 )
(BLAST)

0001: MGEQQISVTV PRDRTDEQAI LALKKGAQLL KCRRRGNPKF CPFKLSMDEK YLIWYSGEEE RQLRLSSVIT IVRGQITPNF QKQAQSDRKE QSFSLIYANG
0101: EHTLDLICKD KAQADSWFKG LRAVITKHHN IRNSVNHRSS RGAQSCINSP AGFMRRKQNL GLLEETPDVT QIRSLCGSPS TLLEERCLSN GLSCSSDSFA
0201: ESDALGPVSS YYETDYDFRN SDCDRSTGSE LCRFSSQRFA ASPPLSIITQ PVTRSNVLKD IMIWGAITGL IDGSKNQNDA LSPKLLESAT MFDVQSISLG
0301: AKHAALVTRQ GEVFCWGNGN SGKLGLKVNI DIDHPKRVES LEDVAVRSVA CSDHQTCAVT ESGELYLWGI DGGTIEQSGS QFLTRKISDV LGGSLTVLSV
0401: ACGAWHTAIV TSSGQLFTYG SGTFGVLGHG SLESVTKPKE VESLRRMKVI SVSCGPWHTA AIVETANDRK FYNAKSCGKL FTWGDGDKGR LGHADSKRKL
0501: VPTCVTELID HDFIKVSCGW TLTVALSISG TVYTMGSSIH GQLGCPRAKD KSVNVVLGNL TRQFVKDIAS GSHHVAVLTS FGNVYTWGKG MNGQLGLGDV
0601: RDRNSPVLVE PLGDRLVESI ACGLNLTAAI CLHKEISLND QTACSSCKSA FGFTRRKHNC YNCGLLFCNA CSSKKAVNAS LAPNKSKLSR VCDSCFDHLW
0701: SITEFSRNVK MDNHTPRMQM VTRRVSEDLT EKQSENEMQN LPQANRSSDG QPRWGQVSGP SLFRFDKIST SSSLNLSVSA RRTSSTKIST SSESNKILTE
0801: EIERLKAVIK NLQRQCELGN EKMEECQQEL DKTWEVAKEE AEKSKAAKEI IKALASKLQA NKEKPSNPLK TGIACNPSQV SPIFDDSMSI PYLTPITTAR
0901: SQHETKQHVE KCVTKSSNRD SNIKLLVDAS PAITRTGYLQ NETQDSSAEQ VEQYEPGVYI TFTALPCGQK TLKRVRFSRK RFSEKEAQRW WEEKQVLVYN
1001: KYDAEI

Arabidopsis Description

F12P19.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.