Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH08750 | Soybean | cytosol | 57.34 | 52.12 |
TraesCS3D01G522600.2 | Wheat | cytosol | 75.3 | 50.17 |
KXG34192 | Sorghum | cytosol | 77.03 | 48.9 |
KRH30228 | Soybean | cytosol | 34.37 | 48.89 |
Zm00001d011805_P001 | Maize | cytosol | 76.17 | 48.36 |
HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 75.65 | 48.24 |
TraesCS3A01G512900.1 | Wheat | cytosol | 75.65 | 48.08 |
TraesCS3B01G581600.2 | Wheat | cytosol | 74.61 | 47.37 |
Zm00001d006773_P001 | Maize | cytosol | 32.3 | 46.4 |
Os05t0106700-00 | Rice | mitochondrion | 74.61 | 45.96 |
CDY48550 | Canola | cytosol | 63.04 | 37.24 |
GSMUA_Achr6P13030_001 | Banana | endoplasmic reticulum | 60.45 | 35.75 |
KRG91629 | Soybean | cytosol | 66.84 | 35.25 |
PGSC0003DMT400002081 | Potato | cytosol | 68.22 | 35.08 |
Solyc04g071040.2.1 | Tomato | cytosol | 67.88 | 34.9 |
AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 64.77 | 34.79 |
Os04t0686200-01 | Rice | plasma membrane | 63.39 | 34.72 |
VIT_18s0166g00210.t01 | Wine grape | cytosol | 67.36 | 34.54 |
KRH35179 | Soybean | cytosol | 66.67 | 34.46 |
Bra003698.1-P | Field mustard | mitochondrion | 63.9 | 34.35 |
GSMUA_Achr2P20470_001 | Banana | endoplasmic reticulum, plasma membrane | 58.38 | 34.25 |
CDY47138 | Canola | cytosol | 61.83 | 34.19 |
CDY11586 | Canola | cytosol | 62.18 | 34.19 |
Bra016214.1-P | Field mustard | cytosol | 61.49 | 33.9 |
CDY70949 | Canola | cytosol | 20.73 | 33.9 |
CDX88324 | Canola | cytosol | 62.0 | 33.84 |
AT1G76950.1 | Thale cress | cytosol | 64.25 | 33.73 |
KRH70333 | Soybean | cytosol | 65.11 | 33.66 |
Bra015708.1-P | Field mustard | cytosol | 62.0 | 33.43 |
CDX87557 | Canola | cytosol | 61.83 | 33.36 |
Os05t0545200-00 | Rice | cytosol | 54.92 | 31.36 |
Os01t0700200-01 | Rice | cytosol | 54.75 | 30.36 |
Os02t0554100-01 | Rice | cytosol, plasma membrane | 23.14 | 29.58 |
KRH08736 | Soybean | endoplasmic reticulum | 35.41 | 29.41 |
Os04t0435700-01 | Rice | plasma membrane | 22.97 | 29.36 |
Os05t0384800-01 | Rice | cytosol | 54.58 | 29.1 |
Os08t0430700-02 | Rice | cytosol | 19.52 | 28.61 |
Os01t0952300-00 | Rice | cytosol | 54.92 | 27.82 |
Os11t0545800-01 | Rice | mitochondrion | 20.38 | 27.76 |
Os03t0599600-01 | Rice | mitochondrion | 8.64 | 26.32 |
Os09t0560450-01 | Rice | mitochondrion | 19.69 | 26.09 |
Os01t0777800-01 | Rice | cytosol | 17.79 | 25.69 |
CDX68076 | Canola | cytosol | 34.2 | 23.86 |
KRH30227 | Soybean | cytosol | 18.31 | 23.5 |
Os04t0583700-00 | Rice | cytosol | 40.76 | 22.82 |
Os04t0226400-01 | Rice | plastid | 8.29 | 22.12 |
Os12t0284000-01 | Rice | cytosol | 18.48 | 20.04 |
Os02t0597000-01 | Rice | cytosol | 17.79 | 19.18 |
Os02t0684900-01 | Rice | cytosol | 6.22 | 8.35 |
Os09t0560500-01 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Os08t0430600-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
Gene3D:2.130.10.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A0P0VD89 | ProteinID:BAS76366.1 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR013083 | InterPro:IPR017455 |
EnsemblPlantsGene:Os01g0964800 | EnsemblPlants:Os01t0964800-01 | PFAM:PF00415 | PFAM:PF01363 | PRINTS:PR00633 | ScanProsite:PS00626 |
PFscan:PS50012 | PFscan:PS50178 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF199 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens |
SMART:SM00064 | SUPFAM:SSF50985 | SUPFAM:SSF57903 | UniParc:UPI0000DD8EE3 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel |
InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os01t0964800-01)
Coordinates
chr1:+:42541334..42544499
Molecular Weight (calculated)
61659.9 Da
IEP (calculated)
8.086
GRAVY (calculated)
-0.132
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: RTAFPTPAYG RGRRLCLASS APLSFLFGSA GSRTRSRGCA AGLVGIDPRR ARPPVTPASS DFSILNQPCY SFNSSSWRSD VINMHTKGAS SDVIRVSTSS
101: APSTSSHGSA QDDCDSSGDV YVWGEVICDN SVRTGSDTVV RSTVRTDVLR PKPLESNLVL DAYHVDCGVK HSALVTKNGE VFTWGEESGG RLGHGSREDS
201: IHPRLIESLA VCNVDIVACG EFHTCAVTTA GELYTWGDGT HNVGLLGHGK DVSHWIPKRI AGALEGLAVA YVSCGTWHTA LITTMGQLFT FGDGTFGVLG
301: HGNRESISCP KEVESLSGLK TISVACGVWH TAAIVEVIVT QSSSSISSGK LFTWGDGDKH RLGHGDKEPR LKPTCVASLI DYDFHRIACG HSLTVGLTTS
401: GKVLSMGNTV YGQLGNPRSD GKIPCLVEEI VGENVVQVAC GSYHVAVLTI KSEVFTWGKG ANGRLGHGDI EDRKIPTLVE ALRDRSVRHI ACGANFTAAI
501: CQHKWVSGAE QSQCASCRQP FGFTRKRHNC HNCGLVHCNA CTSRKAVRAA LAPNPAKPYR VCDSCFLKLN NAVDSSAIS
101: APSTSSHGSA QDDCDSSGDV YVWGEVICDN SVRTGSDTVV RSTVRTDVLR PKPLESNLVL DAYHVDCGVK HSALVTKNGE VFTWGEESGG RLGHGSREDS
201: IHPRLIESLA VCNVDIVACG EFHTCAVTTA GELYTWGDGT HNVGLLGHGK DVSHWIPKRI AGALEGLAVA YVSCGTWHTA LITTMGQLFT FGDGTFGVLG
301: HGNRESISCP KEVESLSGLK TISVACGVWH TAAIVEVIVT QSSSSISSGK LFTWGDGDKH RLGHGDKEPR LKPTCVASLI DYDFHRIACG HSLTVGLTTS
401: GKVLSMGNTV YGQLGNPRSD GKIPCLVEEI VGENVVQVAC GSYHVAVLTI KSEVFTWGKG ANGRLGHGDI EDRKIPTLVE ALRDRSVRHI ACGANFTAAI
501: CQHKWVSGAE QSQCASCRQP FGFTRKRHNC HNCGLVHCNA CTSRKAVRAA LAPNPAKPYR VCDSCFLKLN NAVDSSAIS
0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
Arabidopsis Description
PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.