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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH08750 Soybean cytosol 57.34 52.12
TraesCS3D01G522600.2 Wheat cytosol 75.3 50.17
KXG34192 Sorghum cytosol 77.03 48.9
KRH30228 Soybean cytosol 34.37 48.89
Zm00001d011805_P001 Maize cytosol 76.17 48.36
HORVU3Hr1G112690.2 Barley cytosol, plastid 75.65 48.24
TraesCS3A01G512900.1 Wheat cytosol 75.65 48.08
TraesCS3B01G581600.2 Wheat cytosol 74.61 47.37
Zm00001d006773_P001 Maize cytosol 32.3 46.4
Os05t0106700-00 Rice mitochondrion 74.61 45.96
CDY48550 Canola cytosol 63.04 37.24
GSMUA_Achr6P13030_001 Banana endoplasmic reticulum 60.45 35.75
KRG91629 Soybean cytosol 66.84 35.25
PGSC0003DMT400002081 Potato cytosol 68.22 35.08
Solyc04g071040.2.1 Tomato cytosol 67.88 34.9
AT5G42140.2 Thale cress cytosol, endoplasmic reticulum, nucleus 64.77 34.79
Os04t0686200-01 Rice plasma membrane 63.39 34.72
VIT_18s0166g00210.t01 Wine grape cytosol 67.36 34.54
KRH35179 Soybean cytosol 66.67 34.46
Bra003698.1-P Field mustard mitochondrion 63.9 34.35
GSMUA_Achr2P20470_001 Banana endoplasmic reticulum, plasma membrane 58.38 34.25
CDY47138 Canola cytosol 61.83 34.19
CDY11586 Canola cytosol 62.18 34.19
Bra016214.1-P Field mustard cytosol 61.49 33.9
CDY70949 Canola cytosol 20.73 33.9
CDX88324 Canola cytosol 62.0 33.84
AT1G76950.1 Thale cress cytosol 64.25 33.73
KRH70333 Soybean cytosol 65.11 33.66
Bra015708.1-P Field mustard cytosol 62.0 33.43
CDX87557 Canola cytosol 61.83 33.36
Os05t0545200-00 Rice cytosol 54.92 31.36
Os01t0700200-01 Rice cytosol 54.75 30.36
Os02t0554100-01 Rice cytosol, plasma membrane 23.14 29.58
KRH08736 Soybean endoplasmic reticulum 35.41 29.41
Os04t0435700-01 Rice plasma membrane 22.97 29.36
Os05t0384800-01 Rice cytosol 54.58 29.1
Os08t0430700-02 Rice cytosol 19.52 28.61
Os01t0952300-00 Rice cytosol 54.92 27.82
Os11t0545800-01 Rice mitochondrion 20.38 27.76
Os03t0599600-01 Rice mitochondrion 8.64 26.32
Os09t0560450-01 Rice mitochondrion 19.69 26.09
Os01t0777800-01 Rice cytosol 17.79 25.69
CDX68076 Canola cytosol 34.2 23.86
KRH30227 Soybean cytosol 18.31 23.5
Os04t0583700-00 Rice cytosol 40.76 22.82
Os04t0226400-01 Rice plastid 8.29 22.12
Os12t0284000-01 Rice cytosol 18.48 20.04
Os02t0597000-01 Rice cytosol 17.79 19.18
Os02t0684900-01 Rice cytosol 6.22 8.35
Os09t0560500-01 Rice mitochondrion, plastid 0.0 0.0
Os08t0430600-01 Rice plastid 0.0 0.0
Protein Annotations
Gene3D:2.130.10.30Gene3D:3.30.40.10MapMan:35.1UniProt:A0A0P0VD89ProteinID:BAS76366.1GO:GO:0003674
GO:GO:0005488GO:GO:0046872InterPro:IPR000408InterPro:IPR009091InterPro:IPR013083InterPro:IPR017455
EnsemblPlantsGene:Os01g0964800EnsemblPlants:Os01t0964800-01PFAM:PF00415PFAM:PF01363PRINTS:PR00633ScanProsite:PS00626
PFscan:PS50012PFscan:PS50178PANTHER:PTHR22870PANTHER:PTHR22870:SF199InterPro:RCC1/BLIP-IIInterPro:Reg_chr_condens
SMART:SM00064SUPFAM:SSF50985SUPFAM:SSF57903UniParc:UPI0000DD8EE3InterPro:Znf_FYVEInterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHDInterPro:Znf_RING/FYVE/PHDSEG:seg:::
Description
Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os01t0964800-01)
Coordinates
chr1:+:42541334..42544499
Molecular Weight (calculated)
61659.9 Da
IEP (calculated)
8.086
GRAVY (calculated)
-0.132
Length
579 amino acids
Sequence
(BLAST)
001: RTAFPTPAYG RGRRLCLASS APLSFLFGSA GSRTRSRGCA AGLVGIDPRR ARPPVTPASS DFSILNQPCY SFNSSSWRSD VINMHTKGAS SDVIRVSTSS
101: APSTSSHGSA QDDCDSSGDV YVWGEVICDN SVRTGSDTVV RSTVRTDVLR PKPLESNLVL DAYHVDCGVK HSALVTKNGE VFTWGEESGG RLGHGSREDS
201: IHPRLIESLA VCNVDIVACG EFHTCAVTTA GELYTWGDGT HNVGLLGHGK DVSHWIPKRI AGALEGLAVA YVSCGTWHTA LITTMGQLFT FGDGTFGVLG
301: HGNRESISCP KEVESLSGLK TISVACGVWH TAAIVEVIVT QSSSSISSGK LFTWGDGDKH RLGHGDKEPR LKPTCVASLI DYDFHRIACG HSLTVGLTTS
401: GKVLSMGNTV YGQLGNPRSD GKIPCLVEEI VGENVVQVAC GSYHVAVLTI KSEVFTWGKG ANGRLGHGDI EDRKIPTLVE ALRDRSVRHI ACGANFTAAI
501: CQHKWVSGAE QSQCASCRQP FGFTRKRHNC HNCGLVHCNA CTSRKAVRAA LAPNPAKPYR VCDSCFLKLN NAVDSSAIS
Best Arabidopsis Sequence Match ( AT1G76950.1 )
(BLAST)
0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
Arabidopsis Description
PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.