Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0777800-01 | Rice | cytosol | 25.82 | 25.44 |
| Os11t0545800-01 | Rice | mitochondrion | 26.08 | 24.24 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 27.34 | 23.84 |
| Os04t0435700-01 | Rice | plasma membrane | 27.34 | 23.84 |
| Os03t0599600-01 | Rice | mitochondrion | 10.89 | 22.63 |
| Os09t0560450-01 | Rice | mitochondrion | 24.3 | 21.97 |
| Os01t0964800-01 | Rice | mitochondrion | 28.61 | 19.52 |
| Os12t0284000-01 | Rice | cytosol | 24.56 | 18.16 |
| Os02t0597000-01 | Rice | cytosol | 23.54 | 17.32 |
| Os04t0226400-01 | Rice | plastid | 8.61 | 15.67 |
| Os05t0106700-00 | Rice | mitochondrion | 28.35 | 11.91 |
| Os05t0384800-01 | Rice | cytosol | 28.1 | 10.22 |
| Os05t0545200-00 | Rice | cytosol | 25.32 | 9.86 |
| Os01t0952300-00 | Rice | cytosol | 28.1 | 9.71 |
| Os04t0686200-01 | Rice | plasma membrane | 25.82 | 9.65 |
| Os01t0700200-01 | Rice | cytosol | 25.32 | 9.58 |
| Os04t0583700-00 | Rice | cytosol | 24.3 | 9.28 |
| Os02t0684900-01 | Rice | cytosol | 0.0 | 0.0 |
| Os08t0430600-01 | Rice | plastid | 0.0 | 0.0 |
| Os09t0560500-01 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:35.1 | EntrezGene:4345636 | EMBL:AK102785 | ProteinID:BAD01172.1 | ProteinID:BAF23772.1 |
| ProteinID:BAT05547.1 | ProteinID:EEE68730.1 | InterPro:IPR000408 | InterPro:IPR009091 | EnsemblPlantsGene:Os08g0430700 | EnsemblPlants:Os08t0430700-02 |
| PFAM:PF00415 | PRINTS:PR00633 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF206 | UniProt:Q6ZKB8 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SUPFAM:SSF50985 | UniParc:UPI0000212F80 | RefSeq:XP_015650630.1 | SEG:seg |
Description
Similar to UVB-resistance protein-like. (Os08t0430700-01);Similar to UVB-resistance protein-like. (Os08t0430700-02)
Coordinates
chr8:-:20820938..20824841
Molecular Weight (calculated)
41733.8 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.341
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPPASSLP TAVLAWGSGE DGQLGMGGYE EEDWARGVAA LDALAVSAVV AGSRNSLAIC ADGRLFTWGW NQRGTLGHPP ETKTESSPAP VDALAGVSIV
101: QAAIGGWHCL AVDDKGRAYA WGGNEYGQCG EEAERKEDGT RALRRDIPIP QGCAPKLKVR QVAAGGTHSV VLTQDGHVWT WGQPWPPGDI KQISTPVRVQ
201: GLENVKVIAV GAFHNLALTE DGILWAWGNN EYGQLGTGDT QPRSQPIRVE GLSDLSLVDI AAGGWHSTAL TKEGEVYAWG RGEHGRLGFG DDKSSHMVPQ
301: KVELLAGEDI IQVSCGGTHS VALTRDGRMF SYGRGDHGRL GYGRKVTTGH PMEVPIDLPP PGTSGGDSGG QWQARYVACG GRHTLAIATW TEADE
101: QAAIGGWHCL AVDDKGRAYA WGGNEYGQCG EEAERKEDGT RALRRDIPIP QGCAPKLKVR QVAAGGTHSV VLTQDGHVWT WGQPWPPGDI KQISTPVRVQ
201: GLENVKVIAV GAFHNLALTE DGILWAWGNN EYGQLGTGDT QPRSQPIRVE GLSDLSLVDI AAGGWHSTAL TKEGEVYAWG RGEHGRLGFG DDKSSHMVPQ
301: KVELLAGEDI IQVSCGGTHS VALTRDGRMF SYGRGDHGRL GYGRKVTTGH PMEVPIDLPP PGTSGGDSGG QWQARYVACG GRHTLAIATW TEADE
001: MASATSVIAW GSGEDGQLGL GTDEEKELAS VVDALEPFNV RSVVGGSRNS LAICDDGKLF TWGWNQRGTL GHPPETKTES TPSLVKSLAN VKIVQAAIGG
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPSKD ETGRPVRRDI VIPKRCAQQL TVRQVAAGGT HSVVLTREGY VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LKEDGTLWAW GNNEYGQLGT GDTQPRSYPI PVQGLDDLTL VDIAAGGWHS TALTNEGEVY GWGRGEHGRL GFGDNDKSSK MLPQKVNLLA
301: GEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI HIPPPEGRFN HTDEEDDGKW IAKHVACGGR HTLAIVEWKY DQEETE
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPSKD ETGRPVRRDI VIPKRCAQQL TVRQVAAGGT HSVVLTREGY VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LKEDGTLWAW GNNEYGQLGT GDTQPRSYPI PVQGLDDLTL VDIAAGGWHS TALTNEGEVY GWGRGEHGRL GFGDNDKSSK MLPQKVNLLA
301: GEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI HIPPPEGRFN HTDEEDDGKW IAKHVACGGR HTLAIVEWKY DQEETE
Arabidopsis Description
At5g16040 [Source:UniProtKB/TrEMBL;Acc:Q9LFS0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.