Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- extracellular 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033172_P001 | Maize | cytosol | 75.26 | 29.79 |
| OQU91404 | Sorghum | cytosol | 75.79 | 29.75 |
| TraesCS5D01G177900.1 | Wheat | cytosol | 74.74 | 29.58 |
| TraesCS5B01G170800.1 | Wheat | cytosol | 73.68 | 29.17 |
| TraesCS5A01G173400.1 | Wheat | cytosol | 73.16 | 29.02 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 73.16 | 28.96 |
| GSMUA_Achr10P... | Banana | cytosol | 70.0 | 27.54 |
| KRH01383 | Soybean | cytosol | 68.42 | 27.43 |
| KRH45102 | Soybean | cytosol, nucleus, peroxisome | 66.84 | 26.79 |
| VIT_14s0083g01020.t01 | Wine grape | cytosol | 66.32 | 26.36 |
| PGSC0003DMT400003726 | Potato | cytosol | 64.21 | 26.18 |
| Bra039169.1-P | Field mustard | cytosol | 61.05 | 24.63 |
| CDY57523 | Canola | cytosol | 61.05 | 24.63 |
| CDY43240 | Canola | cytosol | 60.53 | 24.36 |
| AT3G02300.2 | Thale cress | cytosol | 60.0 | 23.65 |
| Solyc02g089220.2.1 | Tomato | mitochondrion | 28.42 | 16.36 |
| Os11t0545800-01 | Rice | mitochondrion | 26.84 | 12.0 |
| Os08t0430700-02 | Rice | cytosol | 22.63 | 10.89 |
| Os04t0226400-01 | Rice | plastid | 12.11 | 10.6 |
| Os04t0435700-01 | Rice | plasma membrane | 24.74 | 10.38 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 24.21 | 10.15 |
| Os01t0777800-01 | Rice | cytosol | 18.95 | 8.98 |
| Os01t0964800-01 | Rice | mitochondrion | 26.32 | 8.64 |
| Os09t0560450-01 | Rice | mitochondrion | 19.47 | 8.47 |
| Os02t0597000-01 | Rice | cytosol | 18.42 | 6.52 |
| Os12t0284000-01 | Rice | cytosol | 17.89 | 6.37 |
| Os05t0106700-00 | Rice | mitochondrion | 26.84 | 5.43 |
| Os01t0700200-01 | Rice | cytosol | 24.74 | 4.5 |
| Os04t0686200-01 | Rice | plasma membrane | 24.21 | 4.35 |
| Os04t0583700-00 | Rice | cytosol | 23.16 | 4.26 |
| Os05t0384800-01 | Rice | cytosol | 24.21 | 4.24 |
| Os01t0952300-00 | Rice | cytosol | 25.26 | 4.2 |
| Os05t0545200-00 | Rice | cytosol | 22.11 | 4.14 |
| Os08t0430600-01 | Rice | plastid | 0.0 | 0.0 |
| Os09t0560500-01 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
| Os02t0684900-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os03t0599600-01 | EnsemblPlantsGene:Os03g0599600 | Gene3D:2.130.10.30 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:RCC1/BLIP-II |
| InterPro:Reg_chr_condens | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF321 | PFAM:PF00415 | PFscan:PS50012 | PRINTS:PR00633 |
| ProteinID:BAS85189.1 | ScanProsite:PS00626 | SEG:seg | SUPFAM:SSF50985 | UniParc:UPI000393A3AB | UniProt:A0A0P0W020 |
| MapMan:35.2 | : | : | : | : | : |
Description
Regulator of chromosome condensation, RCC1 domain containing protein. (Os03t0599600-01)
Coordinates
chr3:+:22372945..22380120
Molecular Weight (calculated)
20737.3 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.335
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: SSIRRRQPPP AAPRRSPTAA FAKSLPPKLF KWQDGKNLRW IDVACGRGHT AAVASDGSLY TWGANDFGQL GDGTEESAKE PQKVKALETE FVKSVSCGAH
101: CTAAVAEPRE NNGTISRSRL WVWGQNQGSD YPRLFWGAFA PNTVIHQVSC GAVHVMALSE DGLLQAWDIL GDWEAWDSLG IALFSLEIRS
101: CTAAVAEPRE NNGTISRSRL WVWGQNQGSD YPRLFWGAFA PNTVIHQVSC GAVHVMALSE DGLLQAWDIL GDWEAWDSLG IALFSLEIRS
001: MDIGEIIGEV APSVSIPTKS AIYVWGYNQS GQTGRNEQEK LLRIPKQLPP ELFGCPAGAN SRWLDISCGR EHTAAVASDG SLFAWGANEY GQLGDGTEVG
101: RKHPKKVKQL QSEFVKFVSC GAFCTAAIAE PRENDGTLST SRLWVWGQNQ GSNLPRLFSG AFPATTAIRQ VSCGTAHVVA LSEEGLLQAW GYNEQGQLGR
201: GVTCEGLQAP RVINAYAKFL DEAPELVKIM QLSCGEYHTA ALSDAGEVYT WGLGSMGQLG HVSLQSGDKE LIPRRVVGLD GVSMKEVACG GVHTCALSLE
301: GALYAWGGGQ AGQLGLGPQS GFFFSVSNGS EMLLRNVPVL VIPTDVRLVA CGHSHTLVYM REGRICGWGY NSYGQAANEK SSYAWYPSPV DWCVGQVRKL
401: AAGGGHSAVL TDAFSLKELC EFQLADSVNL SNASEIQDVA FRMGSEALAR LCERLREQLL DGDFTNGEEV Y
101: RKHPKKVKQL QSEFVKFVSC GAFCTAAIAE PRENDGTLST SRLWVWGQNQ GSNLPRLFSG AFPATTAIRQ VSCGTAHVVA LSEEGLLQAW GYNEQGQLGR
201: GVTCEGLQAP RVINAYAKFL DEAPELVKIM QLSCGEYHTA ALSDAGEVYT WGLGSMGQLG HVSLQSGDKE LIPRRVVGLD GVSMKEVACG GVHTCALSLE
301: GALYAWGGGQ AGQLGLGPQS GFFFSVSNGS EMLLRNVPVL VIPTDVRLVA CGHSHTLVYM REGRICGWGY NSYGQAANEK SSYAWYPSPV DWCVGQVRKL
401: AAGGGHSAVL TDAFSLKELC EFQLADSVNL SNASEIQDVA FRMGSEALAR LCERLREQLL DGDFTNGEEV Y
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.