Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07101 | Sorghum | cytosol, plastid | 77.84 | 78.13 |
| Zm00001d050985_P002 | Maize | cytosol | 74.86 | 72.3 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 53.07 | 63.33 |
| TraesCS2D01G340500.1 | Wheat | cytosol | 51.4 | 63.01 |
| TraesCS2B01G360200.1 | Wheat | cytosol | 60.52 | 59.74 |
| Os12t0284000-01 | Rice | cytosol | 58.29 | 58.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.65 | 51.03 |
| Os08t0430700-02 | Rice | cytosol | 17.32 | 23.54 |
| Os04t0435700-01 | Rice | plasma membrane | 19.74 | 23.4 |
| Os02t0554100-01 | Rice | cytosol, plasma membrane | 18.62 | 22.08 |
| Os11t0545800-01 | Rice | mitochondrion | 16.01 | 20.24 |
| Os09t0560450-01 | Rice | mitochondrion | 16.01 | 19.68 |
| Os01t0777800-01 | Rice | cytosol | 13.78 | 18.45 |
| Os03t0599600-01 | Rice | mitochondrion | 6.52 | 18.42 |
| Os01t0964800-01 | Rice | mitochondrion | 19.18 | 17.79 |
| Os04t0226400-01 | Rice | plastid | 6.89 | 17.05 |
| Os04t0686200-01 | Rice | plasma membrane | 23.46 | 11.92 |
| Os05t0384800-01 | Rice | cytosol | 23.65 | 11.69 |
| Os05t0545200-00 | Rice | cytosol | 21.97 | 11.64 |
| Os01t0952300-00 | Rice | cytosol | 24.21 | 11.37 |
| Os01t0700200-01 | Rice | cytosol | 21.79 | 11.21 |
| Os05t0106700-00 | Rice | mitochondrion | 19.18 | 10.96 |
| Os04t0583700-00 | Rice | cytosol | 20.67 | 10.73 |
| Os09t0560500-01 | Rice | mitochondrion, plastid | 0.0 | 0.0 |
| Os08t0430600-01 | Rice | plastid | 0.0 | 0.0 |
| Os02t0684900-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.130.10.30 | MapMan:35.1 | EntrezGene:4329868 | EMBL:AK102225 | ProteinID:BAD21626.1 | ProteinID:BAF09238.1 |
| ProteinID:BAS79561.1 | InterPro:IPR000408 | InterPro:IPR009091 | EnsemblPlantsGene:Os02g0597000 | EnsemblPlants:Os02t0597000-01 | PFAM:PF00415 |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PANTHER:PTHR22870 | PANTHER:PTHR22870:SF198 | UniProt:Q6K907 |
| InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SUPFAM:SSF50985 | UniParc:UPI0000377C58 | RefSeq:XP_015627247.1 | RefSeq:XP_015627248.1 |
| RefSeq:XP_015627249.1 | SEG:seg | : | : | : | : |
Description
Regulator of chromosome condensation, RCC1 domain containing protein. (Os02t0597000-01)
Coordinates
chr2:-:23183131..23186475
Molecular Weight (calculated)
57931.6 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.138
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MQCPMDAAAS GTSPVMQFHG IVDEPPSHSS PLHTALERSQ RHCYGHETPG EFPLAVSPSI VLHVLSTCEL DPKDLAALEA TCTFFSKPAN FEPNFALSLP
101: EVAAFDMCHK RPMVKLMAQQ EREQLKQRCG GSWKLVFKYI VARERNYSRI VAGPGHSIVV TTKGDAYSFG ANCWGQLGLG DTEDRFKPCL IRSLQSIKIT
201: QAAVGSRQTM LVSDTGSVYA FGKGSFVWEE LSDAADHITT PKIVESLKGV FVVQAAIGGY FSAFLSREGQ VYTISWGRTE RLGHSSDPSD VEPRLLSGPL
301: EGVLVAQISA GNCYLLMLAY QPTGMSVYSV GCGLGGKLGH GCKNNKGTPK LIEHFLTLSF NPVSVAAGTW HAAALGDDGR VCTWGWGHTG CLGHGDEEYR
401: VLPTVVQGLS NVKAVHVSTG EYTTFVVSDN GDTYSFGSAE SLNIGFQEDE EAADDADFST PSLVESLKVL NDKAVQISTT NSSYWLNSEM GYPHTFALME
501: SGKLYAFGGG IKGQLGVKLS EGQERAQNPE RVPIDLC
101: EVAAFDMCHK RPMVKLMAQQ EREQLKQRCG GSWKLVFKYI VARERNYSRI VAGPGHSIVV TTKGDAYSFG ANCWGQLGLG DTEDRFKPCL IRSLQSIKIT
201: QAAVGSRQTM LVSDTGSVYA FGKGSFVWEE LSDAADHITT PKIVESLKGV FVVQAAIGGY FSAFLSREGQ VYTISWGRTE RLGHSSDPSD VEPRLLSGPL
301: EGVLVAQISA GNCYLLMLAY QPTGMSVYSV GCGLGGKLGH GCKNNKGTPK LIEHFLTLSF NPVSVAAGTW HAAALGDDGR VCTWGWGHTG CLGHGDEEYR
401: VLPTVVQGLS NVKAVHVSTG EYTTFVVSDN GDTYSFGSAE SLNIGFQEDE EAADDADFST PSLVESLKVL NDKAVQISTT NSSYWLNSEM GYPHTFALME
501: SGKLYAFGGG IKGQLGVKLS EGQERAQNPE RVPIDLC
001: MDATSGTPSL QYINLPEQSV STTSPPVSPF QRPKRHCFGD TTPGEFPLAA NPSIVLHVLT ECRLDPRDLA NLEATCSFFS QPANFAPDIN LSLSELAALD
101: MCNKRVIFKP MNEEERQEMK RRCGGSWKLV LRFLLAGEAC CRREKSQAVA GPGHSVAVTS KGEVYTFGYN NSGQLGHGHT EDEARIQPVR SLQGVRIIQA
201: AAGAARTMLI SDDGKVYACG KESFGEAEYG GQGTKPVTTP QLVTSLKNIF VVQAAIGNYF TAVLSREGKV YTFSWGNDGR LGHQTEAADV EPRPLLGPLE
301: NVPVVQIAAG YCYLLALACQ PNGMSVYSVG CGLGGKLGHG SRTDEKYPRV IEQFQILNLQ PRVVAAGAWH AAVVGQDGRV CTWGWGRYGC LGHGNEECES
401: VPKVVEGLSH VKAVHVATGD YTTFVVSDDG DVYSFGCGES ASLGHHPSFD EQGNRHANVL SPTVVTSLKQ VNERMVQISL TNSIYWNAHT FALTESGKLF
501: AFGAGDQGQL GTELGKNQKE RCVPEKVDID LS
101: MCNKRVIFKP MNEEERQEMK RRCGGSWKLV LRFLLAGEAC CRREKSQAVA GPGHSVAVTS KGEVYTFGYN NSGQLGHGHT EDEARIQPVR SLQGVRIIQA
201: AAGAARTMLI SDDGKVYACG KESFGEAEYG GQGTKPVTTP QLVTSLKNIF VVQAAIGNYF TAVLSREGKV YTFSWGNDGR LGHQTEAADV EPRPLLGPLE
301: NVPVVQIAAG YCYLLALACQ PNGMSVYSVG CGLGGKLGHG SRTDEKYPRV IEQFQILNLQ PRVVAAGAWH AAVVGQDGRV CTWGWGRYGC LGHGNEECES
401: VPKVVEGLSH VKAVHVATGD YTTFVVSDDG DVYSFGCGES ASLGHHPSFD EQGNRHANVL SPTVVTSLKQ VNERMVQISL TNSIYWNAHT FALTESGKLF
501: AFGAGDQGQL GTELGKNQKE RCVPEKVDID LS
Arabidopsis Description
Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU80]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.