Factsheet for HORVU2Hr1G083590.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G340500.1	Wheat	cytosol	66.67	68.49
TraesCS2B01G360200.1	Wheat	cytosol	82.0	67.83
KXG26580	Sorghum	cytosol	63.78	53.45
EES12399	Sorghum	cytosol, plastid	62.44	53.12
Os02t0597000-01	Rice	cytosol	63.33	53.07
Zm00001d050985_P002	Maize	cytosol	63.33	51.26
HORVU5Hr1G034530.6	Barley	cytosol	55.56	46.82
GSMUA_AchrUn_...	Banana	cytosol	51.56	43.53
HORVU3Hr1G108180.1	Barley	mitochondrion	8.0	21.56
HORVU2Hr1G076180.1	Barley	cytosol, endoplasmic reticulum	18.67	19.05
HORVU1Hr1G016430.4	Barley	cytosol	15.56	17.63
HORVU7Hr1G062090.6	Barley	cytosol	16.0	17.39
HORVU5Hr1G053180.5	Barley	cytosol	17.56	16.46
HORVU6Hr1G030600.2	Barley	plasma membrane	16.0	16.29
HORVU3Hr1G076310.2	Barley	cytosol, mitochondrion, nucleus	14.0	13.88
HORVU5Hr1G089510.1	Barley	cytosol	10.89	13.61
HORVU0Hr1G028990.2	Barley	cytosol	9.78	11.17
HORVU7Hr1G038070.12	Barley	cytosol	22.22	10.6
HORVU1Hr1G078890.1	Barley	cytosol	23.11	9.9
HORVU3Hr1G107820.4	Barley	endoplasmic reticulum	24.0	9.83
HORVU2Hr1G124270.22	Barley	cytosol, mitochondrion, nucleus	23.33	9.76
HORVU1Hr1G056870.2	Barley	cytosol, endoplasmic reticulum, nucleus	23.78	9.51
HORVU3Hr1G112690.2	Barley	cytosol, plastid	18.67	9.25
HORVU1Hr1G002740.1	Barley	cytosol, mitochondrion, nucleus, plastid	18.44	9.15
HORVU6Hr1G066460.5	Barley	cytosol	19.33	8.15
HORVU2Hr1G104550.10	Barley	cytosol, nucleus, plastid	20.89	8.14

Protein Annotations

EnsemblPlants:HORVU2Hr1G083590.1	EnsemblPlantsGene:HORVU2Hr1G083590	Gene3D:2.130.10.30	InterPro:IPR000408	InterPro:IPR009091	InterPro:RCC1/BLIP-II
InterPro:Reg_chr_condens	PANTHER:PTHR22870	PANTHER:PTHR22870:SF198	PFAM:PF00415	PFscan:PS50012	PRINTS:PR00633
ScanProsite:PS00626	SEG:seg	SUPFAM:SSF50985	UniParc:UPI000B470802	UniProt:A0A287IPC3	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:+:606377896..606379622

Molecular Weight (calculated)

48519.8 Da

IEP (calculated)

6.432

GRAVY (calculated)

-0.102

Length

450 amino acids

Sequence
(BLAST)

001: SNPAVVTEFH NIVNDVAPRS TSPDRELDLA KRHFSGEEAV GQFPLTASPS ILLHVLSSSE LDPKDLAALE ATCKFFRNPA KFPPDLKLPL PELAAFDMCQ
101: QRAMFKTMKP EAEWLKQRCG GSWKLVLGYI LVGEKNCRRG KSQVTAGPGH SIVVTTNGDV YSFGMNSSGQ LGLGDTEDKF KPCLIRSLQG IRITQAAVGL
201: KRTMLVSNTG SVYVFGIESF GGYSLNGTAA TDYVDSPKVV ESLKGIFVVQ ATIGALFSAV LSREGRVYTF SWGRDDERLG HQSDYTDVEP RLVSGPLENV
301: LVAQISAGSC YLLLLAYQPT GMSVYSVGCG QGGKLGHGNK NNEGIPQLIA HFGEINVRPM SISAGAWHAT VLSCDGRVFT WGWGHCGCLG HGDVQERMIP
401: TAVETSKAVH VSAGQYSTFV IADNGDVYFF GRGSYVLGCQ DDEDEAMAPK

Best Arabidopsis Sequence Match ( AT3G26100.1 )
(BLAST)

001: MCNKRVIFKP MNEEERQEMK RRCGGSWKLV LRFLLAGEAC CRREKSQAVA GPGHSVAVTS KGEVYTFGYN NSGQLGHGHT EDEARIQPVR SLQGVRIIQA
101: AAGAARTMLI SDDGKVYACG KESFGEAEYG GQGTKPVTTP QLVTSLKNIF VVQAAIGNYF TAVLSREGKV YTFSWGNDGR LGHQTEAADV EPRPLLGPLE
201: NVPVVQIAAG YCYLLALACQ PNGMSVYSVG CGLGGKLGHG SRTDEKYPRV IEQFQILNLQ PRVVAAGAWH AAVVGQDGRV CTWGWGRYGC LGHGNEECES
301: VPKVVEGLSH VKAVHVATGD YTTFVVSDDG DVYSFGCGES ASLGHHPSFD EQGNRHANVL SPTVVTSLKQ VNERMVQISL TNSIYWNAHT FALTESGKLF
401: AFGAGDQGQL GTELGKNQKE RCVPEKVDID LS

Arabidopsis Description

Regulator of chromosome condensation (RCC1) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU80]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.