Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G581400.1 | Wheat | cytosol | 96.0 | 96.54 |
| Os04t0686200-01 | Rice | plasma membrane | 80.11 | 81.55 |
| EES13137 | Sorghum | cytosol | 79.28 | 80.17 |
| Zm00001d002876_P001 | Maize | mitochondrion | 77.79 | 77.0 |
| HORVU3Hr1G108180.1 | Barley | mitochondrion | 11.62 | 74.85 |
| KRH08750 | Soybean | cytosol | 35.5 | 59.97 |
| KRG91629 | Soybean | cytosol | 56.6 | 55.46 |
| GSMUA_Achr8P07850_001 | Banana | cytosol | 56.69 | 55.2 |
| KRH35179 | Soybean | cytosol | 57.34 | 55.09 |
| VIT_18s0166g00210.t01 | Wine grape | cytosol | 57.62 | 54.92 |
| PGSC0003DMT400002081 | Potato | cytosol | 57.16 | 54.62 |
| AT5G42140.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 54.65 | 54.55 |
| CDY70949 | Canola | cytosol | 17.94 | 54.52 |
| Solyc04g071040.2.1 | Tomato | cytosol | 56.97 | 54.44 |
| HORVU1Hr1G002740.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 45.72 | 54.24 |
| Bra016214.1-P | Field mustard | cytosol | 52.79 | 54.1 |
| CDY47138 | Canola | cytosol | 52.6 | 54.06 |
| CDX88324 | Canola | cytosol | 53.16 | 53.91 |
| CDY11586 | Canola | cytosol | 52.7 | 53.85 |
| Bra003698.1-P | Field mustard | mitochondrion | 53.81 | 53.76 |
| KRH70333 | Soybean | cytosol | 55.95 | 53.75 |
| HORVU3Hr1G112690.2 | Barley | cytosol, plastid | 45.26 | 53.63 |
| Bra015708.1-P | Field mustard | cytosol | 53.25 | 53.35 |
| KRH30228 | Soybean | cytosol | 20.17 | 53.32 |
| CDX87557 | Canola | cytosol | 53.07 | 53.22 |
| AT1G76950.1 | Thale cress | cytosol | 54.28 | 52.95 |
| CDY48550 | Canola | cytosol | 48.05 | 52.76 |
| HORVU0Hr1G028990.2 | Barley | cytosol | 19.24 | 52.54 |
| KRH08736 | Soybean | endoplasmic reticulum | 33.64 | 51.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.48 | 51.78 |
| CDX68076 | Canola | cytosol | 38.29 | 49.64 |
| HORVU1Hr1G078890.1 | Barley | cytosol | 45.17 | 46.24 |
| KRH30227 | Soybean | cytosol | 18.68 | 44.57 |
| HORVU3Hr1G107820.4 | Barley | endoplasmic reticulum | 44.05 | 43.13 |
| HORVU1Hr1G056870.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 44.89 | 42.93 |
| HORVU7Hr1G038070.12 | Barley | cytosol | 33.92 | 38.71 |
| HORVU6Hr1G066460.5 | Barley | cytosol | 33.09 | 33.36 |
| HORVU5Hr1G089510.1 | Barley | cytosol | 10.59 | 31.67 |
| HORVU2Hr1G104550.10 | Barley | cytosol, nucleus, plastid | 33.83 | 31.52 |
| HORVU2Hr1G076180.1 | Barley | cytosol, endoplasmic reticulum | 12.64 | 30.84 |
| HORVU6Hr1G030600.2 | Barley | plasma membrane | 12.55 | 30.54 |
| HORVU1Hr1G016430.4 | Barley | cytosol | 9.76 | 26.45 |
| HORVU7Hr1G062090.6 | Barley | cytosol | 9.48 | 24.64 |
| HORVU5Hr1G053180.5 | Barley | cytosol | 10.78 | 24.17 |
| HORVU3Hr1G076310.2 | Barley | cytosol, mitochondrion, nucleus | 10.04 | 23.79 |
| HORVU2Hr1G083590.1 | Barley | cytosol | 9.76 | 23.33 |
| HORVU5Hr1G034530.6 | Barley | cytosol | 10.97 | 22.1 |
Protein Annotations
| Gene3D:2.130.10.30 | Gene3D:2.30.29.30 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A287JSJ1 | InterPro:BRX_N |
| InterPro:Brevis_radix_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G124270 |
| EnsemblPlants:HORVU2Hr1G124270.22 | InterPro:IPR000408 | InterPro:IPR009091 | InterPro:IPR011993 | InterPro:IPR013083 | InterPro:IPR013591 |
| InterPro:IPR017455 | PFAM:PF00415 | PFAM:PF01363 | PFAM:PF08381 | PFAM:PF13713 | InterPro:PH-like_dom_sf |
| PRINTS:PR00633 | ScanProsite:PS00626 | PFscan:PS50012 | PFscan:PS50178 | PFscan:PS51514 | PANTHER:PTHR22870 |
| PANTHER:PTHR22870:SF194 | InterPro:RCC1/BLIP-II | InterPro:Reg_chr_condens | SMART:SM00064 | SUPFAM:SSF50729 | SUPFAM:SSF50985 |
| SUPFAM:SSF57903 | UniParc:UPI000B46EE24 | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:758322532..758328644
Molecular Weight (calculated)
117764.0 Da
IEP (calculated)
8.722
GRAVY (calculated)
-0.529
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: RPSNGRSHRR HRQGQALIAL KKGTQLLKYG RKGKPKFTPF RLSTDESTLI WVSSNQEKSL KLASVSRVLS GQRTLVFQRF LLPEKDHLSF SLIYKDGKRS
0101: LDLICKDKVE TQVWFTCLSA LVSPGKHRSQ PQHTDEMRSA ALSFDCGRES SLSSSSTFTT DSLENKLSSA NSKDRSSGEY AYSERTDVSD MQVKSVSSSD
0201: IRVSVSSALS TSSHGSGGED SESFGDVYVW GEVMCDTTSI SGSDGNALSP GATTDILVPK PLESNVMLDV SYVACGVKHA ALITRQTEVF TWGEECSGRL
0301: GHGAGTSIFQ PRLLESLSTC NVEIMACGEF HTCAVTATGD LYTWGDGTHN AGLLGHGSTV SHWIPKRVSG PLEGLQVSTV SCGTWHTALI TTSGLLYTFG
0401: DGTFGALGHG NRETISYPKE VESLKGLRTI SVSCGVWHSA AVVEIIMTQS NASSGKLFTW GDGDKYRLGH GDRASKLKPT CVSSLIDYNF HKSACGHTLT
0501: VGLTTSGHMF TVGSSVYGQL GNPNNDGRYA RLVEDKVGGG GVVEVACGSY HVAVLTNAGE VYTWGKGANG RLGHGDIADR KVPTLVEALR ERSVKRIACG
0601: SGFTAAICQH KWVSGMEQSQ CSACRQPFGF TRKRHNCYHC GLVHCHSCSS KKALRAALSP NPGKPYRVCD SCHMKLSKVM DSGVSSYSRN TIPRIPGDTK
0701: AERMDTKANR VASSTSSDMI KSLDVKAAKQ TKRSDHSPQF PAILQMNDIP FIGSGDLHNA GFTVTNGYPN DPRYTSQFLR MPYLSSPSSV SSENLESFRD
0801: ANELLKQEVQ KLKEEVNSLR QQRELQDAEL KKSEAKASEA AALAAEEASK SKAAKEVIKS LTAQVKEMAE RLPPGDSDVK PPRLAYLPGG VASPEMGREG
0901: QKRYEPVSIH YSQTPTSVTS AWSNGLPPQA HQIGKPGDNT VVPHDNMFEH FNKSRDFPAT HQRTNSGMAG YRPRSEDFDR RETERFQINL QGWNTRGSPG
1001: SPSNQVESEW IEQFEPGVYL TLVSLHDGTK ELKRVRFSRR RFAEHQAESW WSDNHEKVYD KYNVRRTDRI SSVLTS
0101: LDLICKDKVE TQVWFTCLSA LVSPGKHRSQ PQHTDEMRSA ALSFDCGRES SLSSSSTFTT DSLENKLSSA NSKDRSSGEY AYSERTDVSD MQVKSVSSSD
0201: IRVSVSSALS TSSHGSGGED SESFGDVYVW GEVMCDTTSI SGSDGNALSP GATTDILVPK PLESNVMLDV SYVACGVKHA ALITRQTEVF TWGEECSGRL
0301: GHGAGTSIFQ PRLLESLSTC NVEIMACGEF HTCAVTATGD LYTWGDGTHN AGLLGHGSTV SHWIPKRVSG PLEGLQVSTV SCGTWHTALI TTSGLLYTFG
0401: DGTFGALGHG NRETISYPKE VESLKGLRTI SVSCGVWHSA AVVEIIMTQS NASSGKLFTW GDGDKYRLGH GDRASKLKPT CVSSLIDYNF HKSACGHTLT
0501: VGLTTSGHMF TVGSSVYGQL GNPNNDGRYA RLVEDKVGGG GVVEVACGSY HVAVLTNAGE VYTWGKGANG RLGHGDIADR KVPTLVEALR ERSVKRIACG
0601: SGFTAAICQH KWVSGMEQSQ CSACRQPFGF TRKRHNCYHC GLVHCHSCSS KKALRAALSP NPGKPYRVCD SCHMKLSKVM DSGVSSYSRN TIPRIPGDTK
0701: AERMDTKANR VASSTSSDMI KSLDVKAAKQ TKRSDHSPQF PAILQMNDIP FIGSGDLHNA GFTVTNGYPN DPRYTSQFLR MPYLSSPSSV SSENLESFRD
0801: ANELLKQEVQ KLKEEVNSLR QQRELQDAEL KKSEAKASEA AALAAEEASK SKAAKEVIKS LTAQVKEMAE RLPPGDSDVK PPRLAYLPGG VASPEMGREG
0901: QKRYEPVSIH YSQTPTSVTS AWSNGLPPQA HQIGKPGDNT VVPHDNMFEH FNKSRDFPAT HQRTNSGMAG YRPRSEDFDR RETERFQINL QGWNTRGSPG
1001: SPSNQVESEW IEQFEPGVYL TLVSLHDGTK ELKRVRFSRR RFAEHQAESW WSDNHEKVYD KYNVRRTDRI SSVLTS
0001: MADLVTYSNA DHNLEQALIT LKKGTQLLKY GRKGKPKFYP FRLSSDEKSL IWISSSGEKR LKLASVSKIV PGQRTAVFQR YLRPEKDYLS FSLLYNGKKK
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
0101: SLDLICKDKV EAEIWIGGLK TLISTGQGGR SKIDGWSGGG LSVDASRELT SSSPSSSSAS ASRGHSSPGT PFNIDPITSP KSAEPEVPPT DSEKSHVALD
0201: NKNMQTKVSG SDGFRVSVSS AQSSSSHGSA ADDSDALGDV YIWGEVICDN VVKVGIDKNA SYLTTRTDVL VPKPLESNIV LDVHQIACGV RHAAFVTRQG
0301: EIFTWGEESG GRLGHGIGKD VFHPRLVESL TATSSVDFVA CGEFHTCAVT LAGELYTWGD GTHNVGLLGH GSDISHWIPK RIAGSLEGLH VASVSCGPWH
0401: TALITSYGRL FTFGDGTFGV LGHGDKETVQ YPREVESLSG LRTIAVSCGV WHTAAVVEII VTQSNSSSVS SGKLFTWGDG DKNRLGHGDK DPRLKPTCVP
0501: ALIDYNFHKI ACGHSLTVGL TTSGQVFTMG STVYGQLGNL QTDGKLPCLV EDKLASEFVE EISCGAYHVA ALTSRNEVYT WGKGANGRLG HGDLEDRKVP
0601: TIVEALKDRH VKYIACGSNY TAAICLHKWV SGAEQSQCST CRLAFGFTRK RHNCYNCGLV HCHSCSSKKA FRAALAPSAG RLYRVCDSCY VKLSKVSEIN
0701: DTNRRNSAVP RLSGENRDRL DKSEIRLAKF GTSNMDLIKQ LDSKAAKQGK KTDTFSLGRN SQLPSLLQLK DAVQSNIGDM RRATPKLAQA PSGISSRSVS
0801: PFSRRSSPPR SATPMPSTSG LYFPVGIADN MKKTNEILNQ EIVKLRTQVD SLTQKCEFQE VELQNSVKKT QEALALAEEE SAKSRAAKEA IKSLIAQLKD
0901: VAEKLPPGES VKLACLQNGL DQNGFHFPEE NGFHPSRSES MTSSISSVAP FDFAFANASW SNLQSPKQTP RASERNSNAY PADPRLSSSG SVISERIEPF
1001: QFQNNSDNGS SQTGVNNTNQ VEAEWIEQYE PGVYITLVAL HDGTRDLRRV RFSRRRFGEH QAETWWSENR EKVYEKYNVR VSEKSTASQT HRDRDEEEED
1101: IPH
Arabidopsis Description
PRAF1PH, RCC1 and FYVE domains-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q947D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.